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Research Progress and Application Prospects of Animal Models of Group B Coxsackievirus Infections. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-12 Shihan Weng,Rui Zhu,Yuanyuan Wu,Ningshao Xia,Longfa Xu,Tong Cheng
Group B Coxsackieviruses (CVBs) consist of six serotypes, CVB1 to CVB6, which can clinically affect the heart, brain, liver, pancreas and other organs, causing myocarditis, encephalitis, myelitis, pancreatitis, hand-foot-and-mouth disease (HFMD) and other diseases, and can even lead to death. CVBs are widespread globally and highly contagious. However, there are currently no approved CVB vaccines or
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A KSHV-targeted small molecule efficiently blocks SARS-CoV-2 infection via inhibiting expression of EGFR and Cyclin A2. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-19 Zhongwei Dong,Xinyu Wang,Gaowei Hu,Qingye Huang,Yulin Zhang,Yuping Jia,Shujuan Du,Caixia Zhu,Fang Wei,Daizhou Zhang,Yuyan Wang,Qiliang Cai
The Coronavirus Disease 2019 (COVID-19) pandemic has led to numerous cases of co-infection with SARS-CoV-2 and other viruses, including Kaposi's sarcoma-associated herpesvirus (KSHV), worldwide. This co-infection has increased patient mortality due to the lack of efficient bi-targeted drugs. Cambogin, a bioactive natural product, has been shown to effectively induce regression of KSHV-latently infected
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Mosquito populations originating from nonendemic areas have the potential to transmit recently emerging Japanese encephalitis virus genotype IV. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-10 Astri Nur Faizah,Daisuke Kobayashi,Faustus Akankperiwen Azerigyik,Ryo Matsumura,Izumi Kai,Yoshihide Maekawa,Yukiko Higa,Kentaro Itokawa,Toshinori Sasaki,Kris Cahyo Mulyatno,Sri Subekti,Maria Inge Lusida,Etik Ainun Rohmah,Yasuko Mori,Yusuf Ozbel,Chizu Sanjoba,Tran Vu Phong,Tran Cong Tu,Shinji Kasai,Kyoko Sawabe,Haruhiko Isawa
Japanese encephalitis virus (JEV) genotype IV (GIV) is one of the least common and most neglected genotypes worldwide, having been identified only on a few Indonesian islands until it was recently found to be the cause of outbreaks that occurred in several Australian states in early 2022. Given the limited availability of information, the vector range for JEV GIV remains unknown; thus, understanding
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Genomic characterizations of Klebsiella variicola: emerging pathogens identified from sepsis patients in Ethiopian referral hospitals. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-18 Melese Hailu Legese,Daniel Asrat,Adane Mihret,Badrul Hasan,Abraham Aseffa,Göte Swedberg
Healthcare in low- and middle-income countries is becoming problematic due to the emergence of multidrug-resistant bacteria causing serious morbidity and mortality. Klebsiella variicola carrying multiple antimicrobial resistance (AMR) genes were found significantly among sepsis patients in a study done between October 2019 and September 2020 at four Ethiopian hospitals located in the central (Tikur
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Marked neurotropism and potential adaptation of H5N1 clade 2.3.4.4.b virus in naturally infected domestic cats. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-17 Shubhada K Chothe,Surabhi Srinivas,Sougat Misra,Noel Chandan Nallipogu,Elizabeth Gilbride,Lindsey LaBella,Swastidipa Mukherjee,Christian H Gauthier,Heidi L Pecoraro,Brett T Webb,James M Pipas,Santhamani Ramasamy,Suresh V Kuchipudi
In April 2024, ten cats died in a rural South Dakota (SD) residence, showing respiratory and neurological symptoms. Necropsy and laboratory testing of two cats confirmed H5N1 clade 2.3.4.4b infection. The viral genome sequences are closely related to recent SD cattle H5N1 sequences. Cat H5N1 genomes had unique mutations, including T143A in haemagglutinin, known to affect infectivity and immune evasion
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Emerging epidemic of the Africa-type plasmid in penicillinase-producing Neisseria gonorrhoeae in Guangdong, China, 2013-2022. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Xiao-Lin Qin,Yang Chen,Xing-Zhong Wu,Wen-Tao Chen,Yao-Hua Xue,Jin-Mei Huang,San-Mei Tang,Yin-Yuan Lan,Zhan-Qin Feng,Han Zhou,Zi-Yan Zhang,Qing-Xian Zhan,Kui Chenga,He-Ping Zheng
The prevalence of penicillinase-producing Neisseria gonorrhoeae (PPNG) is a crucial public health concern because of its resistance to penicillin and cephalosporins. From 2013 to 2022, a total of 1,748 N. gonorrhoeae isolates from Guangdong, China, were examined for their antibiotic susceptibility and molecular epidemiological characteristics. PPNG prevalence increased markedly from 37.25% to 63.87%
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Preassembled complexes of hAgo2 and ssRNA delivered by nanoparticles: A novel silencing gene expression approach overcoming the absence of the canonical pathway of siRNA processing in the apicomplexan parasite Babesia microti, blood parasite of veterinary and zoonotic importance. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Shimaa A E-S El-Sayed,Mohamed A Rizk,Hang Li,Uday Kumar Mohanta,Iqra Zafar,Shengwei Ji,Zhuowei Ma,Thom Do,Yongc Hang Li,Daisuke Kondoh,Jerzy Jaroszewski,Xuenan Xuan
Due to the lack of efficacy of the currently used chemical drugs, poor tick control, and lack of effective vaccines against Babesia, novel control strategies are urgently needed. In this regard, searching for anti-Babesia gene therapy may facilitate the control of this infection. Following this pattern, small interfering RNAs (siRNAs) are widely used to study gene function and hence open the way to
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Nationwide seroprevalence of SARS-CoV-2 Delta variant and five Omicron sublineages in companion cats and dogs in the USA: insights into their role in COVID-19 epidemiology. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-11 Subarna Barua,Nneka Vivian Iduu,Daniel Felipe Barrantes Murillo,Asfiha Tarannum,Hill Dimino,Suchita Barua,Yue Shu,Calvin Johnson,Megan R Miller,Kelly Chenoweth,Peter Christopherson,Laura Huber,Theresa Wood,Kelley Turner,Chengming Wang
Understanding SARS-CoV-2 epidemiology in companion animals is critical for evaluating their role in viral transmission and their potential as sentinels for human infections. This large-scale serosurvey analyzed serum samples from 706 cats and 2,396 dogs collected across the USA in 2023 using a surrogate virus neutralization test (sVNT) to detect SARS-CoV-2 antibodies. Overall, 5.7% of cats and 4.7%
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Identification of cepharanthine as an effective inhibitor of African swine fever virus replication. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-05 Chuanxiang Qi,Jiyoung Lee,Yongqiang Zhang,Huan Chen,Jiaxuan Lv,Zhenzhong Wang,Jinming Li,Xiaodong Wu,Yong-Sam Jung,Zhiliang Wang,Yingjuan Qian
African swine fever virus (ASFV) causes highly contagious swine disease, African swine fever (ASF), thereby posing a severe socioeconomic threat to the global pig industry and underscoring that effective antiviral therapies are urgently required. To identify safe and efficient anti-ASFV compounds, a natural compound library was screened by performing an established cell-based ELISA in an ASFV-infected
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Antimicrobial resistance in hypermucoviscous and non-hypermucoviscous Klebsiella pneumoniae: a systematic review and meta-analysis. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-16 Hiroki Namikawa,Ken-Ichi Oinuma,Yukihiro Kaneko,Hiroshi Kakeya,Taichi Shuto
Antimicrobial resistance has recently increased due to emerging carbapenem-resistant Klebsiella pneumoniae and extended-spectrum β-lactamase (ESBL)-producing strains of K. pneumoniae, especially among hypermucoviscous K. pneumoniae (hmKp) strains. To evaluate the prevalence of ESBL-producing and carbapenem-resistant strains in hmKp and non-hmKp clinical isolates through a systematic review and meta-analysis
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The E3 ligase RAD18-mediated ubiquitination of henipavirus matrix protein promotes its nuclear-cytoplasmic trafficking and viral egress. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Dongning Jin,Linliang Zhang,Cheng Peng,Mingbin He,Weiwei Wang,Zhifei Li,Cong Liu,Jinhong Du,Jin Zhou,Lei Yin,Chao Shan,Yali Qin,Mingzhou Chen
The nuclear-cytoplasmic trafficking of matrix proteins (M) is essential for henipavirus budding, with M protein ubiquitination playing a pivotal role in this dynamic process. Despite its importance, the intricacies of the M ubiquitination cascade have remained elusive. In this study, we elucidate a novel mechanism by which Nipah virus (NiV), a highly pathogenic henipavirus, utilizes a ubiquitination
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The westward spread dynamics of cholera from the eastern endemic Democratic Republic of the Congo. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Harry César Ntumba Kayembe,Nadège Makuntima Taty,Hippolyte Nani-Tuma Situakibanza
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Utilizing Wastewater Surveillance to Model Behavioral Responses and Prevent Healthcare Overload During 'Disease X' Outbreaks. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-04 Wenxiu Chen,Wei An,Chen Wang,Qun Gao,Chunzhen Wang,Lan Zhang,Xiao Zhang,Song Tang,Jianxin Zhang,Lixin Yu,Peng Wang,Dan Gao,Zhe Wang,Wenhui Gao,Zhe Tian,Yu Zhang,Wai-Yin Ng,Tong Zhang,Ho-Kwong Chui,Jianying Hu,Min Yang
During the COVID-19 pandemic, healthcare systems worldwide faced severe strain. This study, utilizing wastewater virus surveillance, identified that periodic spontaneous avoidance behaviors significantly impacted infectious disease transmission during rapid and intense outbreaks. To incorporate these behaviors into disease transmission analysis, we introduced the Su-SEIQR model and validated it using
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Predictive metabolite signatures for risk of progression to active TB from QuantiFERON supernatants of Household Contacts of TB patients. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-04 Evangeline Ann Daniel,Shubham Upadhyay,Murugesan Selvachithiram,Sathyamurthi Pattabiraman,Brindha Bhanu,Amsaveni Sivaprakasam,Vandana Kulkarni,Rajesh Karyakarte,Sanjay Gaikwad,Mandar Paradkar,Shri Vijay Bala Yogendra Shivakumar,Vidya Mave,Amita Gupta,Keshava Prasad,Luke Elizabeth Hanna
AbstractThe identification of individuals with the greatest risk of progression to active tuberculosis (TB) disease from the huge reservoir of Mycobacterium tuberculosis (Mtb) infected individuals continues to remain an arduous ascent in the global effort to control TB. In a two-year prospective study, we analysed metabolic profiles in the unstimulated and TB antigen stimulated QuantiFERON supernatants
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Susceptibility of calf lung slice cultures to H5N1 influenza virus. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Kate Guilfoyle,Monica Mirolo,Geert van Amerongen,Guido van der Net,Mara Sophie Lombardo,Theresa Störk,Guus Rimmelzwaan,Martin Ludlow,Albert Osterhaus
ABSTRACTThe current outbreak of HPAI H5N1 virus infections in dairy cattle in the USA underscores the need for easily accessible methods to rapidly assess host susceptibility for infection with known and emerging influenza viruses. Here we show that ex vivo lung slice cultures from calves provide a useful method to rapidly screen host susceptibility to a range of influenza A viruses.
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West Nile Virus in a Changing Climate: epidemiology, pathology, advances in diagnosis and treatment, vaccine designing and control strategies, emerging public health challenges - a comprehensive review. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-30 Parminder Singh,Mahalaqua Nazli Khatib,Suhas Ballal,Mandeep Kaur,Deepak Nathiya,Shilpa Sharma,G V Siva Prasad,Aashna Sinha,Abhay M Gaidhane,Priyanka Mohapatra,Amit Varma,Sorabh Lakhanpal,Muhammed Shabil,Ganesh Bushi,Sanjit Sah,Hashem Abu Serhan
West Nile Virus (WNV), first identified in Uganda in 1937, remains a significant global health threat, adapting across diverse ecosystems and expanding geographically, particularly into temperate regions of Europe and North America. This review provides a comprehensive exploration of the latest insights and challenges in WNV management, focusing on epidemiological trends, molecular advancements, and
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High-throughput single-cell analysis reveals Omp38-specific monoclonal antibodies that protect against Acinetobacter baumannii infection. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-17 Yiwei Zhang,Hao Cheng,Peng Yu,Shufeng Wang,Hui Dong,Song Lu,Ruiqi Yang,Baiqing Li,Jie Luo,Ruihan Mao,Zhaohui Zhang,Yong Qi,Xiaohua Chen,Jinya Ding,Zemin He,Jingbo Zhang,Tingting Zhao,Xiangmei Chen,Rong Lin,Haibo Li,Yi Tian,Yuzhang Wu
Infections caused by Acinetobacter baumannii (A. baumannii) have emerged as a global public health concern because of high pathogenicity of this bacterium. Monoclonal antibodies (mAbs) have a lower likelihood of promoting drug resistance and offer targeted treatment, thereby reducing potential adverse effects; however, the therapeutic potential of mAbs targeting A. baumannii has not been fully characterized
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Origin, pathogenicity, and transmissibility of a human isolated influenza A(H10N3) virus from China. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Wenfei Zhu,Lei Yang,Xue Han,Min Tan,Shumei Zou,Xiyan Li,Weijuan Huang,Xiaoxu Zeng,Dayan Wang
Subtype H10 viruses are known to infect humans in Africa, Oceania, and Asia. In 2021, 2022, and recently in April 2024, a novel H10N3 subtype avian influenza virus was found cause human infection with severe pneumonia. Herein, we comprehensively studied the phylogenetic evolution and biological characteristics of the newly emerged influenza A(H10N3) virus. We found that the human isolated H10N3 virus
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Isoniazid potentiates tigecycline to kill methicillin-resistant Staphylococcus aureus. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Xuan-Wei Chen,Hao-Qing Chen,Jia-Han Wu,Zhi-Han Wang,Yu-Qing Zhou,Si-Qi Tian,Bo Peng
Therapeutic option for treating methicillin-resistant Staphylococcus aureus (MRSA) infection is urgently required since its resistance to a broad spectrum of currently available antibiotics. Here, we report that isoniazid is able to potentiate the killing efficacy of tigecycline to MRSA. The combination of isoniazid and tigecycline reduces the minimal inhibitory concentration of clinic MRSA strains
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Automatic identification of clinically important Aspergillus species by artificial intelligence-based image recognition: proof-of-concept study. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Chi-Ching Tsang,Chenyang Zhao,Yueh Liu,Ken P K Lin,James Y M Tang,Kar-On Cheng,Franklin W N Chow,Weiming Yao,Ka-Fai Chan,Sharon N L Poon,Kelly Y C Wong,Lianyi Zhou,Oscar T N Mak,Jeremy C Y Lee,Suhui Zhao,Antonio H Y Ngan,Alan K L Wu,Kitty S C Fung,Tak-Lun Que,Jade L L Teng,Dirk Schnieders,Siu-Ming Yiu,Susanna K P Lau,Patrick C Y Woo
While morphological examination is the most widely used for Aspergillus identification in clinical laboratories, PCR-sequencing and MALDI-TOF MS are emerging technologies in more financially-competent laboratories. However, mycological expertise, molecular biologists and/or expensive equipment are needed for these. Recently, artificial intelligence (AI), especially image recognition, is being increasingly
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Reassortment of newly emergent clade 2.3.4.4b A(H5N1) highly pathogenic avian influenza A viruses in Bangladesh. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Subrata Barman,Jasmine C M Turner,M Kamrul Hasan,Sharmin Akhtar,Trushar Jeevan,John Franks,David Walker,Nabanita Mukherjee,Patrick Seiler,Lisa Kercher,Pamela McKenzie,Robert G Webster,Mohammed M Feeroz,Richard J Webby
ABSTRACTAvian influenza active surveillance was conducted in Bangladesh from January 2022 to November 2023 in live-poultry markets (LPMs) and Tanguar Haor wetlands. The predominant viruses circulating in LPMs were low pathogenic avian influenza (LPAI) A(H9N2) and clade 2.3.2.1a highly pathogenic avian influenza (HPAI) A(H5N1) viruses. Non-H9N2 LPAIs were found at Tanguar Haor and at a lower prevalence
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Discovery of a pan anti-SARS-CoV-2 monoclonal antibody with highly efficient infected cell killing capacity for novel immunotherapeutic approaches. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Daouda Abba Moussa,Mario Vazquez,Christine Chable-Bessia,Vincent Roux-Portalez,Elia Tamagnini,Mattia Pedotti,Luca Simonelli,Giang Ngo,Manon Souchard,Sebastien Lyonnais,Myriam Chentouf,Nathalie Gros,Soledad Marsile-Medun,Heiko Dinter,Martine Pugnière,Pierre Martineau,Luca Varani,Manel Juan,Hugo Calderon,Mar Naranjo-Gomez,Mireia Pelegrin
Unlocking the potential of broadly reactive coronavirus monoclonal antibodies (mAbs) and their derivatives offers a transformative therapeutic avenue against severe COVID-19, especially crucial for safeguarding high-risk populations. Novel mAb-based immunotherapies may help address the reduced efficacy of current vaccines and neutralizing mAbs caused by the emergence of variants of concern (VOCs).
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Development and characterization of high-efficiency cell-adapted live attenuated vaccine candidate against African swine fever. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-28 Min Ho Kim,Ashan Subasinghe,Yongkwan Kim,Hyeok-Il Kwon,Yehjin Cho,Kiramage Chathuranga,Ji-Won Cha,Ji-Yoon Moon,Ji-Hyeon Hong,Jin Kim,Seung-Chul Lee,Niranjan Dodantenna,Nuwan Gamage,W A Gayan Chathuranga,Yeonji Kim,In-Joong Yoon,Joo Young Lee,In Pil Mo,Weonhwa Jheong,Sung-Sik Yoo,Jong-Soo Lee
African swine fever (ASF), a contagious and lethal haemorrhagic disease of domestic pigs and wild boars, poses a significant threat to the global pig industry. Although experimental vaccine candidates derived from naturally attenuated, genetically engineered, or cell culture-adapted ASF virus have been tested, no commercial vaccine is accepted globally. We developed a safe and effective cell-adapted
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CoronaVac-induced antibodies that facilitate Fc-mediated neutrophil phagocytosis track with COVID-19 disease resolution. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-25 Chuang Li,Jie Yu,Rahma Issa,Lili Wang,Mingzhe Ning,Shengxia Yin,Jie Li,Chao Wu,Yuxin Chen
Although severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants raise concerns about decreased vaccine efficacy, vaccines continue to confer robust protection in humans, implying that immunity beyond neutralization contributes to vaccine efficacy. In addition to neutralization, antibodies can mediate various Fc-dependent effector functions, including antibody-dependent cellular phagocytosis
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Unprecedented large outbreak of Plasmodium malariae malaria in Vietnam: Epidemiological and clinical perspectives. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-16 Chau Van Khanh,Hương Giang Lê,Tuấn Cường Võ,Nguyen Xuan Quang,Do Van Nguyen,Nguyen Cong Trung Dung,Le Thanh Tam,Nguyen Thanh Thuy Nhien,Đăng Thùy Dương Nguyễn,Thu Hằng Nguyễn,Tran Thi Hue Van,Le Duc Vinh,Pham Minh Quan,Nguyen Kim Trung,Jung-Mi Kang,Byoung-Kuk Na,Huynh Hong Quang
Plasmodium malariae, a causative agent of quartan malaria, is prevalent across tropical and subtropical regions, but global cases have been usually very rare and sporadic. However, a significant outbreak of quartan malaria caused by P. malariae occurred in Khanh Vinh District, Khanh Hoa Province, Vietnam in 2023 and the outbreak persists. In this report, we present the epidemiological and clinical
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Evaluation of waning of IgG antibody responses after rVSVΔG-ZEBOV-GP and Ad26.ZEBOV, MVA-BN-Filo Ebola virus disease vaccines: a modelling study from the PREVAC randomized trial. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-12-09 Simon Valayer,Marie Alexandre,Mélanie Prague,Abdoul Habib Beavogui,Seydou Doumbia,Mark Kieh,Brian Greenwood,Bailah Leigh,Marie Poupelin,Christine Schwimmer,Samba O Sow,Irina Maljkovic Berry,Jens H Kuhn,Daniela Fusco,Natasha Dubois Cauwelaert,Deborah Watson-Jones,Rodolphe Thiébaut,Yves Lévy,Yazdan Yazdanpanah,Laura Richert,Edouard Lhomme,
rVSVΔG-ZEBOV-GP and Ad26.ZEBOV, MVA-BN-Filo are WHO-prequalified vaccination regimens against Ebola virus disease (EVD). Challenges associated with measuring long-term clinical protection warrant the evaluation of immune response kinetics after vaccination. Data from a large phase 2 randomized double-blind clinical trial (PREVAC) were used to evaluate waning of anti-Ebola virus (EBOV) glycoprotein
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A pan-orthoebolavirus neutralizing antibody encoded by mRNA effectively prevents virus infection. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-25 Pengfei Fan,Bingjie Sun,Zixuan Liu,Ting Fang,Yi Ren,Xiaofan Zhao,Zhenwei Song,Yilong Yang,Jianmin Li,Changming Yu,Wei Chen
Orthoebolavirus is a genus of hazardous pathogens that has caused over 30 outbreaks. However, currently approved therapies are limited in scope, as they are only effective against the Ebola virus and lack cross-protection against other orthoebolaviruses. Here, we demonstrate that a previously isolated human-derived antibody, 2G1, can recognize the glycoprotein (GP) of every orthoebolavirus species
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The trend, prevalence and potential risk factors of secondary HIV transmission among HIV/AIDS individuals receiving ART in Guangxi, China: a longitudinal cross-sectional study. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-23 Jinfeng He,Shanmei Zhong,Cai Qin,Aidan Nong,Zhaosen Lin,Huayue Liang,Fei Zhang,Jiaxiao Jiang,Peijiang Pan,Wudi Wei,Jie Liu,Deping Liu,Li Ye,Hao Liang,Bingyu Liang
Identifying the prevalence and risk factors of secondary human immunodeficiency virus (HIV) transmission from people living with HIV (PLWH) to other people is crucial for ending the HIV epidemic. However, the data among antiretroviral therapy (ART) patients is limited. This study aims to assess the prevalence and risk factors of secondary HIV transmission among PLWH receiving ART by longitudinal molecular
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Distribution of Clostridioides difficile ribotypes and sequence types across humans, animals and food in 13 European countries. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-27 Maja Rupnik,Virginie Viprey,Sandra Janezic,Valerija Tkalec,Georgina Davis,Béatrice Sente,Nathalie Devos,Bruno H Muller,Emmanuelle Santiago-Allexant,Philippe Cleuziat,Mark Wilcox,Kerrie Davies,
Clostridioides difficile is a One Health pathogen found in humans, animals, and the environment, with food representing a potential transmission route. One Health studies are often limited to a single country or selected reservoirs and ribotypes. This study provides a varied and accessible collection of C. difficile isolates and sequencing data derived from human, animal, and food sources across 13
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Influenza neuraminidase mutations and resistance to neuraminidase inhibitors. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-26 Jiapeng Xu,Qiting Luo,Yuanyuan Huang,Jieyu Li,Wei Ye,Ran Yan,Xinrui Zhou,Zhendan He,Ge Liu,Qinchang Zhu
Mutations in influenza virus neuraminidase (NA) can lead to viral resistance to NA inhibitors (NAIs). To update global influenza NA mutations and resistance to NAIs, we investigated epidemic information from global regions for NAIs-resistant influenza strains and analyzed their NA mutations. Drug-resistant mutations in NA, especially new mutations occurred in 2016-2024, were updated. The H274Y mutation
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Analytical and clinical evaluation of a duplex RT-qPCR assay for the detection and identification of o'nyong-nyong and chikungunya virus. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-24 Konrad M Wesselmann,Lea Luciani,Laurence Thirion,Xavier de Lamballerie,Remi Charrel,Laura Pezzi
The mosquito-borne alphavirus o'nyong-nyong virus (ONNV) has proven its potential to cause major human outbreaks. On the African continent, ONNV causes unspecific febrile illness and co-circulates with the close relative chikungunya virus (CHIKV). The true scale of ONNV burden is poorly understood in Africa, because of the scarce availability of molecular in-house and commercial assays, strong cross-reactivity
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Unbiased phage display screening identifies hidden malaria vaccine targets. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-22 Marcelo Jacobs-Lorena,Sung-Jae Cha
Malaria is among the deadliest infectious diseases. Over 200 million annual clinical malaria cases are reported and more than half a million people, mostly children, die every year. The most advanced RTS,S/AS01 vaccine based on the P. falciparum circumsporozoite protein (CSP), targets sporozoite liver infection but achieved modest efficacy. To reduce malaria death, novel malaria vaccine development
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The synergistic effect between phages and Ceftolozane/Tazobactam in Pseudomonas aeruginosa endotracheal tube biofilm. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-17 Viviane de C Oliveira,Alba Soler-Comas,Amanda C S D Rocha,Cláudia H Silva-Lovato,Evandro Watanabe,Antoni Torres,Laia Fernández-Barat
Although an increased effectiveness has been suggested when phages and antibiotics are combined, this approach has not been tested against a mature biofilm on an endotracheal tube (ETT) surface. This study evaluated the effect of short- and long-term combined phage-antibiotic therapy in a control of a mature biofilm on an ETT surface. Pseudomonas aeruginosa strains, including susceptible and resistant
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Inflammation associated with monocyte/macrophage activation and recruitment corresponds with lethal outcome in a mouse model of Crimean-Congo haemorrhagic fever1. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-19 Teresa E Sorvillo,Jana M Ritter,Stephen R Welch,JoAnn D Coleman-McCray,Katherine A Davies,Heather M Hayes,Scott D Pegan,Joel M Montgomery,Éric Bergeron,Christina F Spiropoulou,Jessica R Spengler
Crimean-Congo haemorrhagic fever virus (CCHFV) causes human disease ranging from subclinical to a fatal haemorrhagic syndrome. Determinants of CCHF pathogenesis are largely unknown and animal models that recapitulate human disease are limited. A recently described mouse model uses a monoclonal antibody (mAb 5A3) targeting the interferon (IFN) alpha/beta receptor to suppress type I IFN responses, making
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Dissecting immunological mechanisms underlying influenza viral nucleoprotein-induced mucosal immunity against diverse viral strains. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-21 Wanyue Zhang,Angela Sloan,Jérémie Prévost,Levi Tamming,Sathya Raman,Annabelle Pfeifle,Caroline Gravel,Wangxue Chen,Anwar M Hashem,Jianguo Wu,Jingxin Cao,Michael J W Johnston,Lisheng Wang,Simon Sauve,Michael Rosu-Myles,Darwyn Kobasa,David Safronetz,Xuguang Li
The nucleoprotein (NP) of type A influenza virus (IAV) is highly conserved across all virus strains, making it an attractive candidate antigen for universal vaccines. While various studies have explored NP-induced mucosal immunity, here we interrogated the mechanistic differences between intramuscular (IM) and intranasal (IN) delivery of a recombinant adenovirus carrying NP fused with a bifunctional
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Survivability of H5N1 avian influenza virus in homemade yogurt, cheese and whey Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Juliane Lang, Dajana Helke, Maryna Kuryshko, Elsayed M. Abdelwhab
Influenza virus is typically associated with respiratory infections, but H5N1 in US dairy cows raises public health concerns about milk by-products. We show that simple home recipes can inactivate ...
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Genetic and structural characterization of dengue virus involved in the 2023 autochthonous outbreaks in central Italy Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Fabrizio Carletti, Gabriella De Carli, Pietro Giorgio Spezia, Cesare Ernesto Maria Gruber, Ingrid Guarnetti Prandi, Martina Rueca, Alessandro Agresta, Eliana Specchiarello, Lavinia Fabeni, Elisa San Giovanni, Chiara Arcuri, Martina Spaziante, Daniele Focosi, Paola Scognamiglio, Alessandra Barca, Emanuele Nicastri, Enrico Girardi, Giovanni Chillemi, Francesco Vairo, Fabrizio Maggi
Dengue virus (DENV) has been expanding its range to temperate areas that are not usually affected, where the spread of vectors has been facilitated by global trade and climate change. In Europe, th...
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COVID-19 vaccination modified the effect of nirmatrelvir–ritonavir on post-acute mortality and rehospitalization: a retrospective cohort study Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Huwen Wang, Yuchen Wei, Guozhang Lin, Christopher Boyer, Katherine Min Jia, Chi Tim Hung, Xiaoting Jiang, Conglu Li, Carrie Ho Kwan Yam, Tsz Yu Chow, Yawen Wang, Shi Zhao, Zihao Guo, Kehang Li, Aimin Yang, Chris Ka Pun Mok, David S. C. Hui, Ka Chun Chong, Eng Kiong Yeoh
While previous research examined coronavirus disease 2019 (COVID-19) antiviral-vaccine interactions through exploratory subgroup analysis, none specifically designed for examining this interaction ...
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Overexpression of blaSHV-12 caused by tandem amplification contributed to ceftazidime/avibactam resistance in hypervirulent and carbapenem-resistant Klebsiella pneumoniae Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-05 Chao Liu, Juan Yi, Ping Yang, Chunjing Du, Fan Jiang, Ming Lu, Pengcheng Du, Ning Shen
We identified a novel ceftazidime/avibactam (CAZ/AVI) resistance mechanism in endemic sequence type 11 hypervirulent and carbapenem-resistant Klebsiella pneumoniae isolated from a patient who had n...
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Structural insight into broadening SARS-CoV-2 neutralization by an antibody cocktail harboring both NTD and RBD potent antibodies Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Wenling Jiang, Yanan Jiang, Hui Sun, Tingting Deng, Kunyu Yu, Qianjiao Fang, Huimin Ge, Miaoling Lan, Yanling Lin, Zhongyue Fang, Yali Zhang, Lizhi Zhou, Tingting Li, Hai Yu, Qingbing Zheng, Shaowei Li, Ningshao Xia, Ying Gu
The continual emergence of highly pathogenic novel coronaviruses and their variants has underscored the importance of neutralizing monoclonal antibodies (mAbs) as a pivotal therapeutic approach. In...
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Circulating HBsAg-specific B cells are partially rescued in chronically HBV-infected patients with functional cure Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Shuqin Gu, Libo Tang, Ling Guo, Chunxiu Zhong, Xin Fu, Guofu Ye, Shihong Zhong, Xiaoyi Li, Chunhua Wen, Yang Zhou, Jinling Wei, Haitao Chen, Nikolai Novikov, Simon P. Fletcher, M. Anthony Moody, Jinlin Hou, Yongyin Li
It is well established that humoral immunity targeting hepatitis B virus surface antigen (HBsAg) plays a critical role in viral clearance and clinical cure. However, the functional changes in HBsAg...
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Epidemiology and biological characteristics of influenza A (H4N6) viruses from wild birds Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Xingdong Song, Jingman Tian, Minghui Li, Xiaoli Bai, Zhiguo Zhao, Jianzhong Shi, Xianying Zeng, Guobin Tian, Yuntao Guan, Hongliang Chai, Yanbing Li, Hualan Chen
During the active surveillance, we isolated nine H4N6 subtype influenza A viruses from wild birds in China. To reveal the epidemiology and biology characteristics of H4 subtype influenza A virus fr...
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SARS-CoV-2 hijacks host CD55, CD59 and factor H to impair antibody-dependent complement-mediated lysis Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Laura Gebetsberger, Zahra Malekshahi, Aron Teutsch, Gabor Tajti, Frédéric Fontaine, Nara Marella, André Mueller, Lena Prantl, Hannes Stockinger, Heribert Stoiber, Anna Ohradanova-Repic
The complement system is a vital anti-microbial defence mechanism against circulating pathogens. Excessive complement activation can have deleterious outcomes for the host and is consequently tight...
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Type 3 immune response protects against Salmonella Typhimurium infection in the small intestine of neonatal rats Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Zhipeng Yang, Mei Zhang, Ning Gao, Jian Peng, Hongkui Wei
Bacterial infections, particularly Salmonella, pose a significant health risk to neonates due to their underdeveloped immune systems. Understanding the immune responses in the neonatal intestine du...
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Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Xiao Niu, Zhiqiang Li, Jing Wang, Fanchong Jian, Yuanling Yu, Weiliang Song, Ayijiang Yisimayi, Shuo Du, Zhiying Zhang, Qianran Wang, Jing Wang, Ran An, Yao Wang, Peng Wang, Haiyan Sun, Lingling Yu, Sijie Yang, Tianhe Xiao, Qingqing Gu, Fei Shao, Youchun Wang, Junyu Xiao, Yunlong Cao
A multitude of functional mutations continue to emerge on the N-terminal domain (NTD) of the spike protein in SARS-CoV-2 Omicron subvariants. Understanding the immunogenicity of Omicron NTD and the...
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Erp57 facilitates ZIKV-induced DNA damage via NS2B/NS3 complex formation Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Yiran Wang, Dan Song, Yichen Li, Leiying Qin, Qianya Wan, Huan Hu, Mandi Wu, Yaxiu Feng, Luis Schang, Robert Weiss, Ming-Liang He
It is believed that DNA double-strand breaks induced by Zika virus (ZIKV) infection in pregnant women is a main reason of brain damage (e.g. microcephaly, severe brain malformation, and neuropathy)...
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Brucellosis Seroprevalence in Cattle in China During 2014–2024: A Systematic Review and Meta-analysis Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-25 Zihan Tian, Liyun Wan, Jie Pei, Tingting Li, Xiaozhong Wang, Peng Yuan, Aizhen Guo, Yingyu Chen
Brucellosis, caused by several species of Brucella, continues to be a significant illness that poses a global threat to public health. China remains a persistent hotspot for brucellosis, despite th...
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Out of the blue: Detection of a unique highly pathogenic avian influenza virus of subtype H7N5 in Germany. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Ann Kathrin Ahrens, Anne Pohlmann, Christian Grund, Martin Beer, Timm C. Harder
Published in Emerging Microbes & Infections (Just accepted, 2024)
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Impact of isoniazid monoresistance on overall and vulnerable patient populations in Taiwan Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-23 Meng-Rui Lee, Li-Ta Keng, Ming-Chia Lee, Jin-Hua Chen, Chih-Hsin Lee, Jann-Yuan Wang
Isoniazid is an early bactericidal anti-tuberculosis (TB) agent and isoniazid mono-resistance TB is the most prevalent drug-resistant TB worldwide. Concerns exist regarding whether resistance to is...
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Correction Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-21
Published in Emerging Microbes & Infections (Vol. 13, No. 1, 2024)
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Genetic Characterization and Receptor Binding analysis of a Novel H5N1 HPAI Virus with a H6Nx-Derived PA Gene in Guangdong, China Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Jieheng He, Jing Liu, Zhanfei Yan, Gaojie Chen, Runzhi Liu, Yu Yang, Yulin Yan, Sheng Yuan, Jinyue Guo, Yong Li, Hai Yu, Zhaoping Liang, Tao Ren, Shujian Huang, Feng Wen
Published in Emerging Microbes & Infections (Just accepted, 2024)
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Structural insights into alterations in the substrate spectrum of serine-β-lactamase OXA-10 from Pseudomonas aeruginosa by single amino acid substitutions Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Chae-eun Lee, Yoonsik Park, Hyunjae Park, Kiwoong Kwak, Hyeonmin Lee, Jiwon Yun, Donghyun Lee, Jung Hun Lee, Sang Hee Lee, Lin-Woo Kang
The extensive use of β-lactam antibiotics has led to significant resistance, primarily due to hydrolysis by β-lactamases. OXA class D β-lactamases can hydrolyze a wide range of β-lactam antibiotics...
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Prolonged Omicron-specific B cell maturation alleviates immune imprinting induced by SARS-CoV-2 inactivated vaccine Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-15 Ayijiang Yisimayi, Weiliang Song, Jing Wang, Fanchong Jian, Yuanling Yu, Xiaosu Chen, Yanli Xu, Ran An, Yao Wang, Jing Wang, Haiyan Sun, Peng Wang, Lingling Yu, Fei Shao, Ronghua Jin, Zhongyang Shen, Youchun Wang, Yunlong Cao
SARS-CoV-2 ancestral strain-induced immune imprinting poses great challenges to updating vaccines for new variants. Studies showed that repeated Omicron exposures could override immune imprinting i...
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Novel recombinant vaccinia virus-vectored vaccine affords complete protection against homologous Borrelia burgdorferi infection in mice Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Annabelle Pfeifle, Wanyue Zhang, Jingxin Cao, Sathya N. Thulasi Raman, Rose Anderson-Duvall, Levi Tamming, Caroline Gravel, Heather Coatsworth, Wangxue Chen, Michael J. W. Johnston, Simon Sauve, Michael Rosu-Myles, Lisheng Wang, Xuguang Li
The rising prevalence of Lyme disease (LD) in North America and Europe has emerged as a pressing public health concern. Despite the availability of veterinary LD vaccines, no vaccine is currently a...
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TianTan vaccinia virus-based EBV vaccines targeting both latent and lytic antigens elicits potent immunity against lethal EBV challenge in humanized mice Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-13 Xinyu Zhang, Yanhong Chen, Shuhui Wang, Ling Zhong, Zheng Xiang, Xiao Zhang, Shanshan Zhang, Xiang Zhou, Wanlin Zhang, Yan Zhou, Qiuting Zhang, Jingtong Liang, Yanran Luo, Yufei Wang, Ling Chen, Xiaoping Ye, Qisheng Feng, Mu-Sheng Zeng, Ying Liu, Yi-Xin Zeng, Yiming Shao, Miao Xu
Epstein–Barr virus (EBV) infection has been related to multiple epithelial cancers and lymphomas. Current efforts in developing a prophylactic EBV vaccine have focused on inducing neutralizing anti...
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Cryptosporidium species and subtypes in Norway: predominance of C. parvum and emergence of C. mortiferum Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-13 Jahid Hasan Tipu, Audun Sivertsen, Jan-Egil Afset, Lars Sandven, Hanne Brekke, Hilde Marie Lund, Linnea Sofie Elburg, Peter Gaustad, Tore Lier, Liv Reidun Tverelv, Øystein Haarklau Johansen, Lucy J. Robertson, Kurt Hanevik
PCR-based diagnostics has revealed the previously largely unknown Cryptosporidium transmission and infections in high-income countries. This study aimed to determine domestic and imported subtypes ...
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Neutralisation Resistance of SARS-CoV-2 Spike-Variants is Primarily Mediated by Synergistic Receptor Binding Domain Substitutions Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Long V. Pham, Alexander P. Underwood, Alekxander Binderup, Ulrik Fahnøe, Carlota Fernandez-Antunez, Blanca Lopez-Mendez, Line Abildgaard Ryberg, Andrea Galli, Christina Sølund, Nina Weis, Santseharay Ramirez, Jens Bukh
The evolution of SARS-CoV-2 has led to the emergence of numerous variants of concern (VOCs), marked by changes in the viral spike glycoprotein, the primary target for neutralising antibody (nAb) re...
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Viral genetics and transmission dynamics in the second wave of mpox outbreak in Portugal and forecasting public health scenarios Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Rita Cordeiro, Constantino P. Caetano, Daniel Sobral, Rita Ferreira, Luís Coelho, Ana Pelerito, Isabel Lopes de Carvalho, Sónia Namorado, Dinis B. Loyens, Ricardo Mexia, Cândida Fernandes, José Miguel Neves, Ana Luísa João, Miguel Rocha, Luís Miguel Duque, Inês Correia, Teresa Baptista, Cláudia Brazão, Diogo Sousa, Paulo Filipe, Miguel Alpalhão, Fernando Maltez, Diana Póvoas, Raquel Pinto, João Caria
In 2023, a second wave of the global mpox epidemic, which is mainly affecting men who have sex with men (MSM), was observed in some countries. Herein, we benefited from a large viral sequence sampl...
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Ad5-nCoV boosted vaccine and reinfection-induced memory T/B cell responses and humoral immunity to SARS-CoV-2: based on two prospective cohorts Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-03 Aidibai Simayi, Yuxin Chen, Jinjin Chu, Huiyan Yu, Shihan Zhang, Changjun Bao, Fengcai Zhu, Hui Jin, Yuanfang Qin, Qian Zhen, Yong Liu, Liguo Zhu
Here, we regularly followed SARS-CoV-2 infected cohorts to investigate the combined effects of neutralizing antibodies (NAbs) and B and T cell profiles during the convalescent period. Ten participa...
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Characterization of quorum regulatory small RNAs in an emerging pathogen Vibrio fluvialis and their roles toward type VI secretion system VflT6SS2 modulation Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Anran Zhang, Yue Xiao, Yu Han, Yuanming Huang, Biao Kan, Weili Liang
The type VI secretion system (T6SS) is essential for Gram-negative bacteria to antagonize a wide variety of prokaryotic and eukaryotic competitors and thus gain survival advantages. Two sets of T6S...