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A pan-orthoebolavirus neutralizing antibody encoded by mRNA effectively prevents virus infection. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-19 Pengfei Fan,Bingjie Sun,Zixuan Liu,Ting Fang,Yi Ren,Xiaofan Zhao,Zhenwei Song,Yilong Yang,Jianmin Li,Changming Yu,Wei Chen
Orthoebolavirus is a genus of hazardous pathogens that has caused over 30 outbreaks. However, currently approved therapies are limited in scope, as they are only effective against the Ebola virus and lack cross-protection against other orthoebolaviruses. Here, we demonstrate that a previously isolated human-derived antibody, 2G1, can recognize the glycoprotein (GP) of every orthoebolavirus species
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Evaluation of waning of IgG antibody responses after rVSVΔG-ZEBOV-GP and Ad26.ZEBOV, MVA-BN-Filo Ebola virus disease vaccines: a modelling study from the PREVAC randomized trial. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-19 Simon Valayer,Marie Alexandre,Mélanie Prague,Abdoul Habib Beavogui,Seydou Doumbia,Mark Kieh,Brian Greenwood,Bailah Leigh,Marie Poupelin,Christine Schwimmer,Samba O Sow,Irina Maljkovic Berry,Jens H Kuhn,Daniela Fusco,Natasha Dubois Cauwelaert,Deborah Watson-Jones,Rodolphe Thiébaut,Yves Lévy,Yazdan Yazdanpanah,Laura Richert,Edouard Lhomme,
rVSVΔG-ZEBOV-GP and Ad26.ZEBOV, MVA-BN-Filo are WHO-prequalified vaccination regimens against Ebola virus disease (EVD). Challenges associated with measuring long-term clinical protection warrant the evaluation of immune response kinetics after vaccination.Data from a large phase 2 randomized double-blind clinical trial (PREVAC) were used to evaluate waning of anti-Ebola virus (EBOV) glycoprotein (GP1
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Unprecedented large outbreak of Plasmodium malariae malaria in Vietnam: Epidemiological and clinical perspectives. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-19 Chau Van Khanh,Hương Giang Lê,Tuấn Cường Võ,Nguyen Xuan Quang,Do Van Nguyen,Nguyen Cong Trung Dung,Le Thanh Tam,Nguyen Thanh Thuy Nhien,Đăng Thùy Dương Nguyễn,Thu Hằng Nguyễn,Tran Thi Hue Van,Le Duc Vinh,Pham Minh Quan,Nguyen Kim Trung,Jung-Mi Kang,Byoung-Kuk Na,Huynh Hong Quang
A significant outbreak of quartan malaria caused by Plasmodium malariae has occurred in Khanh Vinh District, Khanh Hoa Province, Vietnam in 2023 and the outbreak persists. In this report, we present the epidemiological and clinical characteristics of this extensive outbreak of quartan malaria in Vietnam.
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The Trend, Prevalence and Potential Risk Factors of Secondary HIV Transmission among HIV/AIDS Individuals Receiving ART in Guangxi, China: a Longitudinal cross-sectional Study. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-18 Jinfeng He,Shanmei Zhong,Cai Qin,Aidan Nong,Zhaosen Lin,Huayue Liang,Fei Zhang,Jiaxiao Jiang,Peijiang Pan,Wudi Wei,Jie Liu,Deping Liu,Li Ye,Hao Liang,Bingyu Liang
Identifying the prevalence and risk factors of secondary human immunodeficiency virus (HIV) transmission from people living with HIV (PLWH) to other people is crucial for ending the HIV epidemic. However, the data among antiretroviral therapy (ART) patients is limited. This study aims to assess the prevalence and risk factors of secondary HIV transmission among PLWH receiving ART by longitudinal molecular
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Distribution of Clostridioides difficile ribotypes and sequence types across humans, animals and food in thirteen European countries. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-13 Rupnik Maja,Viprey Virginie,Janezic Sandra,Tkalec Valerija,Davis Georgina,Sente Béatrice,Devos Nathalie,Muller Bruno H,Santiago-Allexant Emmanuelle,Cleuziat Philippe,Wilcox Mark,Davies Kerrie,
Clostridioides difficile is a One Health pathogen found in humans, animals, and environment, with food representing a potential transmission route. One Health studies are often limited to single country or selected reservoirs and ribotypes. This study provides a varied and accessible collection of C. difficile isolates and sequencing data derived from human, animal, and food sources across thirteen
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The synergistic effect between phages and Ceftolozane/Tazobactam in Pseudomonas aeruginosa endotracheal tube biofilm. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-17 Viviane de C Oliveira,Alba Soler-Comas,Amanda C S D Rocha,Cláudia H Silva-Lovato,Evandro Watanabe,Antoni Torres,Laia Fernández-Barat
Although an increased effectiveness has been suggested when phages and antibiotics are combined, this approach has not been tested against a mature biofilm on an endotracheal tube (ETT) surface. This study evaluated the effect of short- and long-term combined phage-antibiotic therapy in a control of a mature biofilm on an ETT surface. Pseudomonas aeruginosa strains, including susceptible and resistant
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Analytical and clinical evaluation of a duplex RT-qPCR assay for the detection and identification of o'nyong-nyong and chikungunya virus. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-12 Konrad M Wesselmann,Lea Luciani,Laurence Thirion,Xavier de Lamballerie,Remi Charrel,Laura Pezzi
The mosquito-borne alphavirus o'nyong-nyong virus (ONNV) has proven its potential to cause major human outbreaks. On the African continent, ONNV causes unspecific febrile illness and co-circulates with the close relative chikungunya virus (CHIKV). The true scale of ONNV burden is poorly understood in Africa, because of the scarce availability of molecular in-house and commercial assays, strong cross-reactivity
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Influenza neuraminidase mutations and resistance to neuraminidase inhibitors. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-12 Jiapeng Xu,Qiting Luo,Yuanyuan Huang,Jieyu Li,Wei Ye,Ran Yan,Xinrui Zhou,Zhendan He,Ge Liu,Qinchang Zhu
Mutations in influenza virus neuraminidase (NA) can lead to viral resistance to NA inhibitors (NAIs). To update global influenza NA mutations and resistance to NAIs, we investigated epidemic information from global regions for NAIs-resistant influenza strains and analyzed their NA mutations. Drug-resistant mutations in NA, especially new mutations occurred in 2016-2024, were updated. The H274Y mutation
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Unbiased phage display screening identifies hidden malaria vaccine targets. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-12 Marcelo Jacobs-Lorena,Sung-Jae Cha
AbstractMalaria is among the deadliest infectious diseases. Over 200 million annual clinical malaria cases are reported and more than half a million people, mostly children, die every year. The most advanced RTS,S/AS01 vaccine based on the P. falciparum circumsporozoite protein (CSP), targets sporozoite liver infection but achieved modest efficacy. To reduce malaria death, novel malaria vaccine development
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Inflammation associated with monocyte/macrophage activation and recruitment corresponds with lethal outcome in a mouse model of Crimean-Congo haemorrhagic fever1. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-19 Teresa E Sorvillo,Jana M Ritter,Stephen R Welch,JoAnn D Coleman-McCray,Katherine A Davies,Heather M Hayes,Scott D Pegan,Joel M Montgomery,Éric Bergeron,Christina F Spiropoulou,Jessica R Spengler
Crimean-Congo haemorrhagic fever virus (CCHFV) causes human disease ranging from subclinical to a fatal haemorrhagic syndrome. Determinants of CCHF pathogenesis are largely unknown and animal models that recapitulate human disease are limited. A recently described mouse model uses a monoclonal antibody (mAb 5A3) targeting the interferon (IFN) alpha/beta receptor to suppress type I IFN responses, making
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Dissecting Immunological Mechanisms Underlying Influenza Viral Nucleoprotein-induced Mucosal Immunity Against Diverse Viral Strains. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-07 Wanyue Zhang,Angela Sloan,Jérémie Prévost,Levi Tamming,Sathya Raman,Annabelle Pfeifle,Caroline Gravel,Wangxue Chen,Anwar M Hashem,Jianguo Wu,Jingxin Cao,Michael J W Johnston,Lisheng Wang,Simon Sauve,Michael Rosu-Myles,Darwyn Kobasa,David Safronetz,Xuguang Li
The nucleoprotein (NP) of type A influenza virus (IAV) is highly conserved across all virus strains, making it an attractive candidate antigen for universal vaccines. While various studies have explored NP-induced mucosal immunity, here we interrogated the mechanistic differences between intramuscular (IM) and intranasal (IN) delivery of a recombinant adenovirus carrying NP fused with a bifunctional
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Survivability of H5N1 avian influenza virus in homemade yogurt, cheese and whey Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Juliane Lang, Dajana Helke, Maryna Kuryshko, Elsayed M. Abdelwhab
Influenza virus is typically associated with respiratory infections, but H5N1 in US dairy cows raises public health concerns about milk by-products. We show that simple home recipes can inactivate ...
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Genetic and structural characterization of dengue virus involved in the 2023 autochthonous outbreaks in central Italy Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Fabrizio Carletti, Gabriella De Carli, Pietro Giorgio Spezia, Cesare Ernesto Maria Gruber, Ingrid Guarnetti Prandi, Martina Rueca, Alessandro Agresta, Eliana Specchiarello, Lavinia Fabeni, Elisa San Giovanni, Chiara Arcuri, Martina Spaziante, Daniele Focosi, Paola Scognamiglio, Alessandra Barca, Emanuele Nicastri, Enrico Girardi, Giovanni Chillemi, Francesco Vairo, Fabrizio Maggi
Dengue virus (DENV) has been expanding its range to temperate areas that are not usually affected, where the spread of vectors has been facilitated by global trade and climate change. In Europe, th...
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COVID-19 vaccination modified the effect of nirmatrelvir–ritonavir on post-acute mortality and rehospitalization: a retrospective cohort study Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-04 Huwen Wang, Yuchen Wei, Guozhang Lin, Christopher Boyer, Katherine Min Jia, Chi Tim Hung, Xiaoting Jiang, Conglu Li, Carrie Ho Kwan Yam, Tsz Yu Chow, Yawen Wang, Shi Zhao, Zihao Guo, Kehang Li, Aimin Yang, Chris Ka Pun Mok, David S. C. Hui, Ka Chun Chong, Eng Kiong Yeoh
While previous research examined coronavirus disease 2019 (COVID-19) antiviral-vaccine interactions through exploratory subgroup analysis, none specifically designed for examining this interaction ...
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Overexpression of blaSHV-12 caused by tandem amplification contributed to ceftazidime/avibactam resistance in hypervirulent and carbapenem-resistant Klebsiella pneumoniae Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-11-05 Chao Liu, Juan Yi, Ping Yang, Chunjing Du, Fan Jiang, Ming Lu, Pengcheng Du, Ning Shen
We identified a novel ceftazidime/avibactam (CAZ/AVI) resistance mechanism in endemic sequence type 11 hypervirulent and carbapenem-resistant Klebsiella pneumoniae isolated from a patient who had n...
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Structural insight into broadening SARS-CoV-2 neutralization by an antibody cocktail harboring both NTD and RBD potent antibodies Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Wenling Jiang, Yanan Jiang, Hui Sun, Tingting Deng, Kunyu Yu, Qianjiao Fang, Huimin Ge, Miaoling Lan, Yanling Lin, Zhongyue Fang, Yali Zhang, Lizhi Zhou, Tingting Li, Hai Yu, Qingbing Zheng, Shaowei Li, Ningshao Xia, Ying Gu
The continual emergence of highly pathogenic novel coronaviruses and their variants has underscored the importance of neutralizing monoclonal antibodies (mAbs) as a pivotal therapeutic approach. In...
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Circulating HBsAg-specific B cells are partially rescued in chronically HBV-infected patients with functional cure Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Shuqin Gu, Libo Tang, Ling Guo, Chunxiu Zhong, Xin Fu, Guofu Ye, Shihong Zhong, Xiaoyi Li, Chunhua Wen, Yang Zhou, Jinling Wei, Haitao Chen, Nikolai Novikov, Simon P. Fletcher, M. Anthony Moody, Jinlin Hou, Yongyin Li
It is well established that humoral immunity targeting hepatitis B virus surface antigen (HBsAg) plays a critical role in viral clearance and clinical cure. However, the functional changes in HBsAg...
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Epidemiology and biological characteristics of influenza A (H4N6) viruses from wild birds Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-29 Xingdong Song, Jingman Tian, Minghui Li, Xiaoli Bai, Zhiguo Zhao, Jianzhong Shi, Xianying Zeng, Guobin Tian, Yuntao Guan, Hongliang Chai, Yanbing Li, Hualan Chen
During the active surveillance, we isolated nine H4N6 subtype influenza A viruses from wild birds in China. To reveal the epidemiology and biology characteristics of H4 subtype influenza A virus fr...
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SARS-CoV-2 hijacks host CD55, CD59 and factor H to impair antibody-dependent complement-mediated lysis Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Laura Gebetsberger, Zahra Malekshahi, Aron Teutsch, Gabor Tajti, Frédéric Fontaine, Nara Marella, André Mueller, Lena Prantl, Hannes Stockinger, Heribert Stoiber, Anna Ohradanova-Repic
The complement system is a vital anti-microbial defence mechanism against circulating pathogens. Excessive complement activation can have deleterious outcomes for the host and is consequently tight...
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Type 3 immune response protects against Salmonella Typhimurium infection in the small intestine of neonatal rats Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Zhipeng Yang, Mei Zhang, Ning Gao, Jian Peng, Hongkui Wei
Bacterial infections, particularly Salmonella, pose a significant health risk to neonates due to their underdeveloped immune systems. Understanding the immune responses in the neonatal intestine du...
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Omicron-specific ultra-potent SARS-CoV-2 neutralizing antibodies targeting the N1/N2 loop of Spike N-terminal domain Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Xiao Niu, Zhiqiang Li, Jing Wang, Fanchong Jian, Yuanling Yu, Weiliang Song, Ayijiang Yisimayi, Shuo Du, Zhiying Zhang, Qianran Wang, Jing Wang, Ran An, Yao Wang, Peng Wang, Haiyan Sun, Lingling Yu, Sijie Yang, Tianhe Xiao, Qingqing Gu, Fei Shao, Youchun Wang, Junyu Xiao, Yunlong Cao
A multitude of functional mutations continue to emerge on the N-terminal domain (NTD) of the spike protein in SARS-CoV-2 Omicron subvariants. Understanding the immunogenicity of Omicron NTD and the...
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Erp57 facilitates ZIKV-induced DNA damage via NS2B/NS3 complex formation Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-28 Yiran Wang, Dan Song, Yichen Li, Leiying Qin, Qianya Wan, Huan Hu, Mandi Wu, Yaxiu Feng, Luis Schang, Robert Weiss, Ming-Liang He
It is believed that DNA double-strand breaks induced by Zika virus (ZIKV) infection in pregnant women is a main reason of brain damage (e.g. microcephaly, severe brain malformation, and neuropathy)...
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Brucellosis Seroprevalence in Cattle in China During 2014–2024: A Systematic Review and Meta-analysis Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-25 Zihan Tian, Liyun Wan, Jie Pei, Tingting Li, Xiaozhong Wang, Peng Yuan, Aizhen Guo, Yingyu Chen
Brucellosis, caused by several species of Brucella, continues to be a significant illness that poses a global threat to public health. China remains a persistent hotspot for brucellosis, despite th...
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Out of the blue: Detection of a unique highly pathogenic avian influenza virus of subtype H7N5 in Germany. Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Ann Kathrin Ahrens, Anne Pohlmann, Christian Grund, Martin Beer, Timm C. Harder
Published in Emerging Microbes & Infections (Just accepted, 2024)
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Impact of isoniazid monoresistance on overall and vulnerable patient populations in Taiwan Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-23 Meng-Rui Lee, Li-Ta Keng, Ming-Chia Lee, Jin-Hua Chen, Chih-Hsin Lee, Jann-Yuan Wang
Isoniazid is an early bactericidal anti-tuberculosis (TB) agent and isoniazid mono-resistance TB is the most prevalent drug-resistant TB worldwide. Concerns exist regarding whether resistance to is...
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Correction Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-21
Published in Emerging Microbes & Infections (Vol. 13, No. 1, 2024)
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Genetic Characterization and Receptor Binding analysis of a Novel H5N1 HPAI Virus with a H6Nx-Derived PA Gene in Guangdong, China Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Jieheng He, Jing Liu, Zhanfei Yan, Gaojie Chen, Runzhi Liu, Yu Yang, Yulin Yan, Sheng Yuan, Jinyue Guo, Yong Li, Hai Yu, Zhaoping Liang, Tao Ren, Shujian Huang, Feng Wen
Published in Emerging Microbes & Infections (Just accepted, 2024)
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Structural insights into alterations in the substrate spectrum of serine-β-lactamase OXA-10 from Pseudomonas aeruginosa by single amino acid substitutions Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-22 Chae-eun Lee, Yoonsik Park, Hyunjae Park, Kiwoong Kwak, Hyeonmin Lee, Jiwon Yun, Donghyun Lee, Jung Hun Lee, Sang Hee Lee, Lin-Woo Kang
The extensive use of β-lactam antibiotics has led to significant resistance, primarily due to hydrolysis by β-lactamases. OXA class D β-lactamases can hydrolyze a wide range of β-lactam antibiotics...
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Prolonged Omicron-specific B cell maturation alleviates immune imprinting induced by SARS-CoV-2 inactivated vaccine Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-15 Ayijiang Yisimayi, Weiliang Song, Jing Wang, Fanchong Jian, Yuanling Yu, Xiaosu Chen, Yanli Xu, Ran An, Yao Wang, Jing Wang, Haiyan Sun, Peng Wang, Lingling Yu, Fei Shao, Ronghua Jin, Zhongyang Shen, Youchun Wang, Yunlong Cao
SARS-CoV-2 ancestral strain-induced immune imprinting poses great challenges to updating vaccines for new variants. Studies showed that repeated Omicron exposures could override immune imprinting i...
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Novel recombinant vaccinia virus-vectored vaccine affords complete protection against homologous Borrelia burgdorferi infection in mice Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Annabelle Pfeifle, Wanyue Zhang, Jingxin Cao, Sathya N. Thulasi Raman, Rose Anderson-Duvall, Levi Tamming, Caroline Gravel, Heather Coatsworth, Wangxue Chen, Michael J. W. Johnston, Simon Sauve, Michael Rosu-Myles, Lisheng Wang, Xuguang Li
The rising prevalence of Lyme disease (LD) in North America and Europe has emerged as a pressing public health concern. Despite the availability of veterinary LD vaccines, no vaccine is currently a...
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TianTan vaccinia virus-based EBV vaccines targeting both latent and lytic antigens elicits potent immunity against lethal EBV challenge in humanized mice Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-13 Xinyu Zhang, Yanhong Chen, Shuhui Wang, Ling Zhong, Zheng Xiang, Xiao Zhang, Shanshan Zhang, Xiang Zhou, Wanlin Zhang, Yan Zhou, Qiuting Zhang, Jingtong Liang, Yanran Luo, Yufei Wang, Ling Chen, Xiaoping Ye, Qisheng Feng, Mu-Sheng Zeng, Ying Liu, Yi-Xin Zeng, Yiming Shao, Miao Xu
Epstein–Barr virus (EBV) infection has been related to multiple epithelial cancers and lymphomas. Current efforts in developing a prophylactic EBV vaccine have focused on inducing neutralizing anti...
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Cryptosporidium species and subtypes in Norway: predominance of C. parvum and emergence of C. mortiferum Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-13 Jahid Hasan Tipu, Audun Sivertsen, Jan-Egil Afset, Lars Sandven, Hanne Brekke, Hilde Marie Lund, Linnea Sofie Elburg, Peter Gaustad, Tore Lier, Liv Reidun Tverelv, Øystein Haarklau Johansen, Lucy J. Robertson, Kurt Hanevik
PCR-based diagnostics has revealed the previously largely unknown Cryptosporidium transmission and infections in high-income countries. This study aimed to determine domestic and imported subtypes ...
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Neutralisation Resistance of SARS-CoV-2 Spike-Variants is Primarily Mediated by Synergistic Receptor Binding Domain Substitutions Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Long V. Pham, Alexander P. Underwood, Alekxander Binderup, Ulrik Fahnøe, Carlota Fernandez-Antunez, Blanca Lopez-Mendez, Line Abildgaard Ryberg, Andrea Galli, Christina Sølund, Nina Weis, Santseharay Ramirez, Jens Bukh
The evolution of SARS-CoV-2 has led to the emergence of numerous variants of concern (VOCs), marked by changes in the viral spike glycoprotein, the primary target for neutralising antibody (nAb) re...
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Viral genetics and transmission dynamics in the second wave of mpox outbreak in Portugal and forecasting public health scenarios Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-11 Rita Cordeiro, Constantino P. Caetano, Daniel Sobral, Rita Ferreira, Luís Coelho, Ana Pelerito, Isabel Lopes de Carvalho, Sónia Namorado, Dinis B. Loyens, Ricardo Mexia, Cândida Fernandes, José Miguel Neves, Ana Luísa João, Miguel Rocha, Luís Miguel Duque, Inês Correia, Teresa Baptista, Cláudia Brazão, Diogo Sousa, Paulo Filipe, Miguel Alpalhão, Fernando Maltez, Diana Póvoas, Raquel Pinto, João Caria
In 2023, a second wave of the global mpox epidemic, which is mainly affecting men who have sex with men (MSM), was observed in some countries. Herein, we benefited from a large viral sequence sampl...
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Ad5-nCoV boosted vaccine and reinfection-induced memory T/B cell responses and humoral immunity to SARS-CoV-2: based on two prospective cohorts Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-03 Aidibai Simayi, Yuxin Chen, Jinjin Chu, Huiyan Yu, Shihan Zhang, Changjun Bao, Fengcai Zhu, Hui Jin, Yuanfang Qin, Qian Zhen, Yong Liu, Liguo Zhu
Here, we regularly followed SARS-CoV-2 infected cohorts to investigate the combined effects of neutralizing antibodies (NAbs) and B and T cell profiles during the convalescent period. Ten participa...
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Characterization of quorum regulatory small RNAs in an emerging pathogen Vibrio fluvialis and their roles toward type VI secretion system VflT6SS2 modulation Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Anran Zhang, Yue Xiao, Yu Han, Yuanming Huang, Biao Kan, Weili Liang
The type VI secretion system (T6SS) is essential for Gram-negative bacteria to antagonize a wide variety of prokaryotic and eukaryotic competitors and thus gain survival advantages. Two sets of T6S...
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Impaired mucosal IgA response in patients with severe COVID-19 Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-02 Melyssa Yaugel-Novoa, Blandine Noailly, Fabienne Jospin, Andrés Pizzorno, Aurélien Traversier, Bruno Pozzetto, Louis Waeckel, Stéphanie Longet, Sylvie Pillet, Elisabeth Botelho-Nevers, Manuel Rosa-Calatrava, Thomas Bourlet, Stéphane Paul
Several studies have investigated the antibody response to SARS-CoV-2, focusing particularly on the systemic humoral immune response and the production of immunoglobulin G (IgG) antibodies. IgA ant...
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A single dose of an ALVAC vector-based RABV virus-like particle candidate vaccine induces a potent immune response in mice, cats and dogs Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Xianyong Meng, Feihu Yan, Weiqi Wang, Shen Wang, Haiyang Cong, Jiaqi Li, Yongkun Zhao, Tiecheng Wang, Nan Li, Yuwei Gao, Jianzhong Wang, Na Feng, Xianzhu Xia
Rabies, caused by the Rabies virus (RABV), is a highly fatal zoonotic disease. Existing rabies vaccines have demonstrated good immune efficacy, but the complexity of immunization procedures and hig...
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Genomic epidemiology of Clostridioides difficile sequence type 35 reveals intraspecies and interspecies clonal transmission Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Yun Luo, Yu Chen, Shan Lin, Hui Hu, Xiaojun Song, Qiao Bian, Weijia Fang, Huoyang Lv, Qin Wang, Jianmin Jiang, Yi-Wei Tang, Dazhi Jin
Clostridioides difficile sequence type (ST) 35 has been found in humans and animals worldwide. However, its genomic epidemiology and clonal transmission have not been explored in detail. In this st...
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Characterizing HIV-1 transmission by genetic cluster analysis among newly diagnosed patients in the China-Myanmar border region from 2020 to 2023 Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Huan Liu, Yichen Jin, Yuecheng Yang, Xing Duan, Yanfen Cao, Duo Shan, Chang Cai, Houlin Tang
Cluster analysis of HIV sequence can provide insights into viral transmission patterns in border regions. This study aims to illuminate the HIV-1 subtype distribution and transmission dynamics amon...
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Spatial patterns of influenza A virus spread across compartments in commercial swine farms in the United States Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-10-01 Bijaya Hatuwal, Varun Goel, Thomas J. Deliberto, Jim Lowe, Michael Emch, Richard J. Webby, Xiu-Feng Wan
Multiple genetic variants of H1 and H3 influenza A viruses (IAVs) circulate concurrently in US swine farms. Understanding the spatial transmission patterns of IAVs among these farms is crucial for ...
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Cutaneous diphtheria from 2018 to 2022: an observational, retrospective study of epidemiological, microbiological, clinical, and therapeutic characteristics in metropolitan France Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Laure Chêne, Jean-Jacques Morand, Edgar Badell, Julie Toubiana, Fréderic Janvier, Hugo Marthinet, Jean-philippe Suppini, Aude Valois, Gaetan Texier, Sylvain Brisse, Fabien Dutasta ŒDIPE Study Group
The incidence of diphtheria has been rising over the past decade, particularly in its cutaneous form. A clinical review of the case series was therefore required. We reviewed the epidemiological, c...
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Genomic characterization of highly pathogenic H5 avian influenza viruses from Alaska during 2022 provides evidence for genotype-specific trends of spatiotemporal and interspecies dissemination Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-30 Christina A. Ahlstrom, Mia Kim Torchetti, Julianna Lenoch, Kimberlee Beckmen, Megan Boldenow, Evan J. Buck, Bryan Daniels, Krista Dilione, Robert Gerlach, Kristina Lantz, Angela Matz, Rebecca L. Poulson, Laura C. Scott, Gay Sheffield, David Sinnett, David E. Stallknecht, Raphaela Stimmelmayr, Eric Taylor, Alison R. Williams, Andrew M. Ramey
The ongoing panzootic of highly pathogenic H5 clade 2.3.4.4b avian influenza (HPAI) spread to North America in late 2021, with detections of HPAI viruses in Alaska beginning in April 2022. HPAI vir...
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A platform for the rapid screening of equine immunoglobins F (ab)2 derived from single equine memory B cells able to cross-neutralize to influenza virus Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-27 Yuezhi Lin, Yayu Wang, Hongxin Li, Tong Liu, Jiaqi Zhang, Xing Guo, Wei Guo, Yaoxin Wang, Xiangning Liu, Shaoli Huang, Huaxin Liao, XiaoJun Wang
Single B cells-based antibody platforms offer an effective approach for the discovery of useful antibodies for therapeutic or research purposes. Here we present a method for screening equine immuno...
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African swine fever virus modulates the endoplasmic reticulum stress-ATF6-calcium axis to facilitate viral replication Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-27 Yanjin Wang, Jiaqi Li, Hongwei Cao, Lian-Feng Li, Jingwen Dai, Mengxiang Cao, Hao Deng, Dailang Zhong, Yuzi Luo, Yongfeng Li, Meilin Li, Dingkun Peng, Zitao Sun, Xiaowei Gao, Assad Moon, Lijie Tang, Yuan Sun, Su Li, Hua-Ji Qiu
African swine fever (ASF), caused by African swine fever virus (ASFV), is a devastating infectious disease of domestic pigs and wild boar, which threatens the global pig industry. Endoplasmic retic...
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Enterocytozoon bieneusi, a human pathogen Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-26 Céline Nourrisson, Rose-Anne Lavergne, Maxime Moniot, Florent Morio, Philippe Poirier
Although brought to the forefront in the 1980s with the AIDS pandemic, microsporidia infecting humans are still little known. Enterocytozoon bieneusi, by far the most frequent microsporidia species...
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Implications of accumulation of clonally expanded and senescent CD4+GNLY+ T cells in immunological non-responders of HIV-1 infection Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-27 Xiuhan Yang, Cheng Zhen, Huihuang Huang, Yanmei Jiao, Xing Fan, Chao Zhang, Jinwen Song, Songshan Wang, Chunbao Zhou, XinXin Yang, Jinhong Yuan, Jiyuan Zhang, Ruonan Xu, Fu-Sheng Wang
Increased CD4+GNLY+ T cells have been confirmed to be inversely associated with CD4+ T cell count in immunological non-responders (INRs), however, the underlying mechanisms are unknown. This study ...
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Molecular characterisation of influenza B virus from the 2017/18 season in primary models of the human lung reveals improved adaptation to the lower respiratory tract Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-23 Duygu Merve Çalışkan, Sriram Kumar, Saskia Hinse, Klaus Schughart, Rainer Wiewrodt, Stefan Fischer, Vera Krueger, Karsten Wiebe, Peter Barth, Alexander Mellmann, Stephan Ludwig, Linda Brunotte
The 2017/18 influenza season was characterized by unusual high numbers of severe infections and hospitalizations. Instead of influenza A viruses, this season was dominated by infections with influe...
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Progress and challenges in development of animal models for dengue virus infection Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-24 Wang Yuya, Yang Yuansong, Liu Susu, Ling Chen, Wu Yong, Wang Yining, Wang YouChun, Fan Changfa
The severity of the dengue epidemic is on the rise, with its geographic range had expanded to southern Europe by 2024. In this August, the WHO updated the pathogens that could spark the next pandem...
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Bispecific antibodies provide broad neutralization of emerging beta-coronaviruses by targeting ACE2 and viral spikes Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-22 Minghui Li, Chaoyue Zhao, Jialu Shi, Xun Wang, Yuanchen Liu, Xiaoyu Zhao, Guonan Cai, Hin Chu, Pengfei Wang
Human coronaviruses such as SARS-CoV, MERS-CoV, and SARS-CoV-2 have recurrently emerged as significant pathogens, causing severe respiratory illnesses and presenting challenges to monoclonal antibo...
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Epidemiology and global spread of emerging tick-borne Alongshan virus Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-24 André Gömer, Arthur Lang, Saskia Janshoff, Joerg Steinmann, Eike Steinmann
The emergence and spread of novel viral pathogens is a major threat to human health, particularly in the context of climate and human-induced change in land use. Alongshan virus (ALSV) is a tick-bo...
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Sentinel chicken surveillance reveals previously undetected circulation of West Nile virus in the Netherlands Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-27 Kiki Streng, Nnomzie Atama, Felicity Chandler, Rody Blom, Henk van der Jeugd, Maarten Schrama, Marion P.G. Koopmans, Wim H.M. van der Poel, Reina S. Sikkema
West Nile virus (WNV) was first detected in the Netherlands in 2020, with circulation observed in birds, mosquitoes, and humans in two geographical areas. Usutu virus (USUV) has been circulating in...
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Emergence and transmission of the high-risk ST78 clone of OXA-48-producing Enterobacter hormaechei in a single hospital in Taiwan Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-22 Chih-Ming Chen, Hui-Ling Tang, Ying-Tsong Chen, Se-Chin Ke, Yi-Pei Lin, Bo-Han Chen, Ru-Hsiou Teng, Chien-Shun Chiou, Min-Chi Lu, Yi-Chyi Lai
Carbapenem-resistant Enterobacter cloacae complex is a significant global healthcare threat, particularly carbapenemase-producing Enterobacter hormaechei (CPEH). From January 2017 to January 2021, ...
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Copper sensing transcription factor ArsR2 regulates VjbR to sustain virulence in Brucella abortus Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-25 Feijie Zhi, Kemeng Liu, Hao Geng, Mengru Su, Jian Xu, Lei Fu, Ke Ma, Pengcheng Gao, Lvfeng Yuan, YueFeng Chu
Brucellosis, caused by the intracellular pathogen Brucella, is a major zoonotic infection that promotes reproductive disease in domestic animals and chronic debilitating conditions in humans. The A...
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Molecular characterization of emerging recombinant African swine fever virus of genotype I and II in Vietnam, 2023 Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-22 Kyungmoon Lee, Thi Thu Hang Vu, Minjoo Yeom, Viet Dung Nguyen, Thi Tam Than, Van Tam Nguyen, Dae Gwin Jeong, Aruna Ambagala, Van Phan Le, Daesub Song
African swine fever virus (ASFV) recombinant strains pose new challenges for diagnosis and control. This study characterizes genotype I and II recombinant ASFV strains identified in northern Vietna...
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Descriptive epidemiology and phylogenetic analysis of highly pathogenic avian influenza H5N1 clade 2.3.4.4b in British Columbia (B.C.) and the Yukon, Canada, September 2022 to June 2023 Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-22 Shannon L. Russell, Cassandra L. Andrew, Kevin C. Yang, Michelle Coombe, Glenna McGregor, Tony Redford, Agatha N. Jassem, James E. A. Zlosnik, Jolene Giacinti, Kevin S. Kuchinski, John L. Palmer, John R. Tyson, Chris Fjell, Megan Willie, Megan V. Ross, Maeve Winchester, Laurie Wilson, Yohannes Berhane, Caeley Thacker, N. Jane Harms, Catherine Soos, Theresa Burns, Natalie Prystajecky, Chelsea Himsworth
Surveillance data from wildlife and poultry was used to describe the spread of highly pathogenic avian influenza (HPAI) H5N1 clade 2.3.4.4b in British Columbia (B.C.) and the Yukon, Canada from Sep...
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Identification of mpox M1R and B6R monoclonal and bispecific antibodies that efficiently neutralize authentic mpox virus Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-19 Zuning Ren, Mengjun Li, Jiayin Chen, Xiaohua Gong, Shuo Song, Delin Li, Minghui Yang, Jianhai Yu, Sadia Asghar, Yanxin Cui, Shiyu Niu, Zhonghui Liao, Yushan Jiang, Jiahui Liu, Yuqing Li, Bao Zhang, Wei Zhao, Jie Peng, Yang Yang, Chenguang Shen
In 2022, the monkeypox virus (mpox virus, MPXV) exhibited global dissemination across six continents, representing a notable challenge owing to the scarcity of targeted antiviral interventions. Pas...
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Recurrent SARS-CoV-2 spike mutations confer growth advantages to select JN.1 sublineages Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-16 Qian Wang, Ian A. Mellis, Jerren Ho, Anthony Bowen, Theresa Kowalski-Dobson, Riccardo Valdez, Phinikoula S. Katsamba, Madeline Wu, Caitlin Lee, Lawrence Shapiro, Aubree Gordon, Yicheng Guo, David D. Ho, Lihong Liu
The recently dominant SARS-CoV-2 Omicron JN.1 has evolved into multiple sublineages, with recurrent spike mutations R346T, F456L, and T572I, some of which exhibit growth advantages, such as KP.2 an...
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Genome-wide CRISPR/Cas9 library screen identifies C16orf62 as a host dependency factor for porcine deltacoronavirus infection Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-13 Ningning Ma, Mengjia Zhang, Jiaru Zhou, Changsheng Jiang, Ahmed H. Ghonaim, Yumei Sun, Pei Zhou, Guanghao Guo, Anouk Evers, Hongmei Zhu, Qigai He, Robert Jan Lebbink, Berend Jan Bosch, Wentao Li
Porcine deltacoronavirus (PDCoV) is an emerging pathogen that can cause severe diarrhoea and high mortality in suckling piglets. Moreover, evidence of PDCoV infection in humans has raised concerns ...
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The C-terminal amino acid motifs of NS1 protein affect the replication and virulence of naturally NS-truncated H1N1 canine influenza virus Emerg. Microbes Infect. (IF 8.4) Pub Date : 2024-09-13 Pingping Wang, Jianing Guo, Yefan Zhou, Min Zhu, Senbiao Fang, Fanyuan Sun, Chongqiang Huang, Yaohui Zhu, Huabo Zhou, Boyu Pan, Yifeng Qin, Kang Ouyang, Zuzhang Wei, Weijian Huang, Adolfo García-Sastre, Ying Chen
The vast majority of data obtained from sequence analysis of influenza A viruses (IAVs) have revealed that nonstructural 1 (NS1) proteins from H1N1 swine, H3N8 equine, H3N2 avian and the correspond...