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Identifying behaviour-related and physiological risk factors for suicide attempts in the UK Biobank Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-07-02 Bei Zhang, Jia You, Edmund T. Rolls, Xiang Wang, Jujiao Kang, Yuzhu Li, Ruohan Zhang, Wei Zhang, Huifu Wang, Shitong Xiang, Chun Shen, Yuchao Jiang, Chao Xie, Jintai Yu, Wei Cheng, Jianfeng Feng
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Twelve thousand years of ritual practice Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-07-01 Elspeth Hayes
It is rare to formally identify ethnographically known rituals in the archaeological record that are more than a few hundred years old. David et al. report two buried miniature fireplaces from Cloggs Cave, southeastern Australia, that match the structure and contents of ethnographically known Australian Aboriginal rituals, which signals 500 generations of cultural tradition.
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Archaeological evidence of an ethnographically documented Australian Aboriginal ritual dated to the last ice age Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-07-01 Bruno David, Russell Mullett, Nathan Wright, Birgitta Stephenson, Jeremy Ash, Joanna Fresløv, Jean-Jacques Delannoy, Matthew C. McDowell, Jerome Mialanes, Fiona Petchey, Lee J. Arnold, Ashleigh J. Rogers, Joe Crouch, Helen Green, Chris Urwin, Carney D. Matheson
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Near Fatal Opioid Overdose: A Paradigm Case Where Principlism Fails Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-26 Jolion McGreevy
Published in The American Journal of Bioethics (Ahead of Print, 2024)
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Time of sample collection is critical for the replicability of microbiome analyses Nat. Metab. (IF 18.9) Pub Date : 2024-07-01 Celeste Allaband, Amulya Lingaraju, Stephany Flores Ramos, Tanya Kumar, Haniyeh Javaheri, Maria D. Tiu, Ana Carolina Dantas Machado, R. Alexander Richter, Emmanuel Elijah, Gabriel G. Haddad, Vanessa A. Leone, Pieter C. Dorrestein, Rob Knight, Amir Zarrinpar
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Ethics committees promote responsible research in China Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-07-01 Guoyu Wang
Guoyu Wang leads and serves on Chinese ethics committees. She explains how research ethics have developed in China, and why ethics review promotes responsible innovation.
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Evaluation of effects of heat released from SOC decomposition on soil carbon stock and temperature Glob. Change Biol. (IF 10.8) Pub Date : 2024-07-01 Ye Huang, Lin Huang, Chunjing Qiu, Philippe Ciais
Heat released from soil organic carbon (SOC) decomposition (referred to as microbial heat hereafter) could alter the soil's thermal and hydrological conditions, subsequently modulate SOC decomposition and its feedback with climate. While understanding this feedback is crucial for shaping policy to achieve specific climate goal, it has not been comprehensively assessed. This study employs the ORCHIDEE‐MICT
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A randomized controlled trial of nurse-led triage of 911 calls Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-06-28
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The influence of the number of tree searches on maximum likelihood inference in phylogenomics Syst. Biol. (IF 6.1) Pub Date : 2024-06-28 Chao Liu, Xiaofan Zhou, Yuanning Li, Chris Todd Hittinger, Ronghui Pan, Jinyan Huang, Xue-xin Chen, Antonis Rokas, Yun Chen, Xing-Xing Shen
Maximum likelihood (ML) phylogenetic inference is widely used in phylogenomics. As heuristic searches most likely find suboptimal trees, it is recommended to conduct multiple (e.g., ten) tree searches in phylogenetic analyses. However, beyond its positive role, how and to what extent multiple tree searches aid ML phylogenetic inference remains poorly explored. Here, we found that a random starting
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Ethical Complexities in Utilizing Artificial Intelligence for Surrogate Decision Making Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Jennifer Blumenthal-Barby, Faith E. Fletcher, Lauren Taylor, Ryan H. Nelson, Bryanna Moore, Brendan Saloner, Peter A. Ubel
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Respect for Autonomy Requires a Mental Model Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Nada Gligorov, Pierce Randall
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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The dance of gut microbes on the keto diet Nat. Metab. (IF 18.9) Pub Date : 2024-06-27 Jihyun Kim, Ara Koh
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Ketogenic diet-induced bile acids protect against obesity through reduced calorie absorption Nat. Metab. (IF 18.9) Pub Date : 2024-06-27 Xiao Li, Jie Yang, Xiaofeng Zhou, Chen Dai, Mengmeng Kong, Linshan Xie, Chenglin Liu, Yilian Liu, Dandan Li, Xiaonan Ma, Yuxiang Dai, Yan Sun, Zhijie Jian, Xiaohuan Guo, Xu Lin, Yixue Li, Liang Sun, Xin Liu, Li Jin, Huiru Tang, Yan Zheng, Shangyu Hong
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Personalized Patient Preference Predictors Are Neither Technically Feasible nor Ethically Desirable Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Nathaniel Sharadin
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Good Ethics Begin With Good Facts—Vaccination Sensitive Strategies for Scarce Resource Allocation Are Impractical as Well as Unethical Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Anuj B. Mehta, Matthew K. Wynia
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Justice Pluralism during the COVID-19 Pandemic Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Rosamond Rhodes
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Vexing Vaccine Ethics: Denying ICU Care to Vaccine Refusers Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Leonard M. Fleck
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Should SARS-CoV-2 Vaccination be Required for Heart Transplant Listing Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Seth Hollander, Danton Char
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Eliminating or Calibrating the Role of Chance? Acute Resource Scarcity as a Challenge for Luck Egalitarianism Am. J. Bioethics (IF 17.0) Pub Date : 2024-06-24 Jed Adam Gross
Published in The American Journal of Bioethics (Vol. 24, No. 7, 2024)
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Northeast Atlantic species distribution shifts over the last two decades Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-27 Emilie Le Luherne, Lionel Pawlowski, Marianne Robert
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Extreme wildfires in Canada and their contribution to global loss in tree cover and carbon emissions in 2023 Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-27 James MacCarthy, Alexandra Tyukavina, Mikaela J Weisse, Nancy Harris, Erin Glen
Canadian wildfires in 2023 were record breaking with wide‐reaching impacts on people, nature, and climate. Extreme heat and low rainfall associated with climate change led to unprecedented forest fires that released enormous amounts of carbon as they burned. This study used data on fire‐driven tree cover loss and forest carbon fluxes to estimate the total extent of stand‐replacing forest fires and
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Stochastic Character Mapping, Bayesian Model Selection, and Biosynthetic Pathways Shed New Light on the Evolution of Habitat Preference in Cyanobacteria Syst. Biol. (IF 6.1) Pub Date : 2024-06-27 Giorgio Bianchini, Martin Hagemann, Patricia Sánchez-Baracaldo
Cyanobacteria are the only prokaryotes to have evolved oxygenic photosynthesis paving the way for complex life. Studying the evolution and ecological niche of cyanobacteria and their ancestors is crucial for understanding the intricate dynamics of biosphere evolution. These organisms frequently deal with environmental stressors such as salinity and drought, and they employ compatible solutes as a mechanism
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Unveiling the impact of soil methane sink on atmospheric methane concentrations in 2020 Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-26 Xiaoqi Zhou, Wensheng Xiao, Li Cheng, Simeon J. Smaill, Shushi Peng
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Developing an ecological stoichiometry‐based framework for tracing the sources of soil organic matter Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-26 Ji Liu, Ji Chen
Soil organic matter (SOM) encompasses a diverse array of biomolecules, spatially and temporally distributed across multiple biophysical gradients (Lehmann & Kleber, 2015). Soil particulate organic matter (POM) and mineral-associated organic matter (MAOM) are two physically distinct pools with notable differences in sources, chemical composition, and residence time (Angst et al., 2021). POM, predominantly
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Missing phosphorus legacy of the Anthropocene: Quantifying residual phosphorus in the biosphere Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-26 Andrew J. Margenot, Shengnan Zhou, Suwei Xu, Leo M. Condron, Geneviève S. Metson, Philip M. Haygarth, Jordon Wade, Prince C. Agyeman
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Refining stoichiometric approaches to trace soil organic matter sources Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-26 Yi Chang, Dechang Ji, Noah W. Sokol, Kees Jan van Groenigen, Mark A. Bradford, Thomas W. Crowther, Chao Liang, Yiqi Luo, Yakov Kuzyakov, Jingkuan Wang, Fan Ding
In their Letter‐to‐Editor, Liu & Chen (2024) raised the importance and suitability of our recent stoichiometric approach to assess the contribution of plant residue (litter) and microbial sources to mineral‐associated organic matter (MAOM). We highly appreciate their Letter as well as the further suggestion and comments and offer two points of clarification. We call for staying aware of methodological
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Phylo2Vec: a vector representation for binary trees Syst. Biol. (IF 6.1) Pub Date : 2024-06-26 Matthew J Penn, Neil Scheidwasser, Mark P Khurana, David A Duchêne, Christl A Donnelly, Samir Bhatt
Binary phylogenetic trees inferred from biological data are central to understanding the shared history among evolutionary units. However, inferring the placement of latent nodes in a tree is computationally expensive. State-of-the-art methods rely on carefully designed heuristics for tree search, using different data structures for easy manipulation (e.g., classes in object-oriented programming languages)
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The hidden impact of in-source fragmentation in metabolic and chemical mass spectrometry data interpretation Nat. Metab. (IF 18.9) Pub Date : 2024-06-25 Martin Giera, Aries Aisporna, Winnie Uritboonthai, Gary Siuzdak
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Short- and long-term neuropsychiatric outcomes in long COVID in South Korea and Japan Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-06-25 Sunyoung Kim, Hayeon Lee, Jinseok Lee, Seung Won Lee, Rosie Kwon, Min Seo Kim, Ai Koyanagi, Lee Smith, Guillaume Fond, Laurent Boyer, Masoud Rahmati, Guillermo F. López Sánchez, Elena Dragioti, Samuele Cortese, Ju-Young Shin, Ahhyung Choi, Hae Sun Suh, Sunmi Lee, Marco Solmi, Chanyang Min, Jae Il Shin, Dong Keon Yon, Paolo Fusar-Poli
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Model matchmaking via the Solve-RD Rare Disease Models & Mechanisms Network (RDMM-Europe) Lab Anim. (IF 5.9) Pub Date : 2024-06-24 Kornelia Ellwanger, Julie A. Brill, Elke de Boer, Stephanie Efthymiou, Ype Elgersma, Marynelle Icmat, François Lecoquierre, Amanda G. Lobato, Manuela Morleo, Michela Ori, Ashleigh E. Schaffer, Antonio Vitobello, Sara Wells, Binnaz Yalcin, R. Grace Zhai, Marc Sturm, Birte Zurek, Holm Graessner, Eva Bermejo-Sánchez, Teresinha Evangelista, Nicoline Hoogerbrugge, Vincenzo Nigro, Rebecca Schüle, Alain Verloes
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Hurricanes enhance coral connectivity but also superspread coral diseases Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-25 Thomas Dobbelaere, Apolline Dekens, Antoine Saint‐Amand, Lauranne Alaerts, Daniel M. Holstein, Emmanuel Hanert
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Toward a semi-supervised learning approach to phylogenetic estimation Syst. Biol. (IF 6.1) Pub Date : 2024-06-25 Daniele Silvestro, Thibault Latrille, Nicolas Salamin
Models have always been central to inferring molecular evolution and to reconstructing phylogenetic trees. Their use typically involves the development of a mechanistic framework reflecting our understanding of the underlying biological processes, such as nucleotide substitu- tions, and the estimation of model parameters by maximum likelihood or Bayesian inference. However, deriving and optimizing
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MiR-214–3p regulates Piezo1, lysyl oxidases and mitochondrial function in human cardiac fibroblasts Matrix Biol. (IF 4.5) Pub Date : 2024-06-25 Christopher J. Trevelyan, Amanda D.V. MacCannell, Leander Stewart, Theodora Tarousa, Hannah A. Taylor, Michael Murray, Sumia A. Bageghni, Karen E. Hemmings, Mark J. Drinkhill, Lee D. Roberts, Andrew J. Smith, Karen E. Porter, Karen A. Forbes, Neil A. Turner
Cardiac fibroblasts are pivotal regulators of cardiac homeostasis and are essential in the repair of the heart after myocardial infarction (MI), but their function can also become dysregulated, leading to adverse cardiac remodelling involving both fibrosis and hypertrophy. MicroRNAs (miRNAs) are noncoding RNAs that target mRNAs to prevent their translation, with specific miRNAs showing differential
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A framework for understanding climate change impacts through non‐compensatory intra‐ and interspecific climate change responses Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-24 Kyle E. Coblentz, Lisa A. Treidel, Francis P. Biagioli, Christina G. Fragel, Allison E. Johnson, Dinelka D. Thilakarathne, Liuqingqing Yang, John P. DeLong
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Bumble bee responses to climate and landscapes: Investigating habitat associations and species assemblages across geographic regions in the United States of America Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-24 Morgan E. Christman, Lori R. Spears, Emily K. Burchfield, William D. Pearse, James P. Strange, Ricardo A. Ramirez
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Intrinsic microbial temperature sensitivity and soil organic carbon decomposition in response to climate change Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-24 Sen Li, Manuel Delgado‐Baquerizo, Jixian Ding, Han Hu, Weigen Huang, Yishen Sun, Haowei Ni, Yanyun Kuang, Mengting Maggie Yuan, Jizhong Zhou, Jiabao Zhang, Yuting Liang
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Towards reliable detection of introgression in the presence of among-species rate variation Syst. Biol. (IF 6.1) Pub Date : 2024-06-24 Thore Koppetsch, Milan Malinsky, Michael Matschiner
The role of interspecific hybridization has recently seen increasing attention, especially in the context of diversification dynamics. Genomic research has now made it abundantly clear that both hybridization and introgression – the exchange of genetic material through hybridization and backcrossing – are far more common than previously thought. Besides cases of ongoing or recent genetic exchange between
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Redox-modulated SNX25 as a novel regulator of GPCR-G protein signaling from endosomes Redox Biol. (IF 10.7) Pub Date : 2024-06-22 Yulong Zhang, Zhijun Yu, Mingwei Sun, Ruyue Du, Hanhan Gao, Qiankun Dai, Yan Dong, Cuicui Liu, Menghui Yin, Tingting Xu, Xiaofei Zhang, Jinsong Liu, Jinxin Xu
GPCR-G protein signaling from endosomes plays a crucial role in various physiological and pathological processes. However, the mechanism by which endosomal G protein signaling is terminated remains largely unknown. In this study, we aimed to investigate the regulatory mechanisms involved in terminating the signaling of Gα subunits from endosomes. Through structural analysis and cell-based assays, we
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An active peptide from yak inhibits hypoxia-induced lung injury via suppressing VEGF/MAPK/inflammatory signaling Redox Biol. (IF 10.7) Pub Date : 2024-06-22 Feiyan Yang, Zeyu He, Zhongxing Chu, Wen Li, Guangfan Qu, Han Lu, Yiping Tang, Shuguo Sun, Zhang Luo, Feijun Luo
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Island biodiversity in peril: Anticipating a loss of mammals' functional diversity with future species extinctions Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-19 Sonia Llorente-Culebras, Carlos P. Carmona, William D. Carvalho, André Menegotto, Rafael Molina-Venegas, Richard J. Ladle, Ana M. C. Santos
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Climate mitigation potential of cover crops in the United States is regionally concentrated and lower than previous estimates Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-18 Lisa Eash, Stephen Ogle, Shelby C. McClelland, Steven J. Fonte, Meagan E. Schipanski
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Optimizing the design of time-restricted eating human trials Nat. Metab. (IF 18.9) Pub Date : 2024-06-21 Krista A. Varady, Lisa S. Chow
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The sphingosine-1-phosphate receptor 1 mediates the atheroprotective effect of eicosapentaenoic acid Nat. Metab. (IF 18.9) Pub Date : 2024-06-21 Ting Zhou, Jie Cheng, Shuo He, Chao Zhang, Ming-Xin Gao, Li-Jun Zhang, Jin-Peng Sun, Yi Zhu, Ding Ai
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Using games to understand the mind Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-06-21 Kelsey Allen, Franziska Brändle, Matthew Botvinick, Judith E. Fan, Samuel J. Gershman, Alison Gopnik, Thomas L. Griffiths, Joshua K. Hartshorne, Tobias U. Hauser, Mark K. Ho, Joshua R. de Leeuw, Wei Ji Ma, Kou Murayama, Jonathan D. Nelson, Bas van Opheusden, Thomas Pouncy, Janet Rafner, Iyad Rahwan, Robb B. Rutledge, Jacob Sherson, Özgür Şimşek, Hugo Spiers, Christopher Summerfield, Mirko Thalmann
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Effects of a monthly unconditional cash transfer starting at birth on family investments among US families with low income Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-06-21 Lisa A. Gennetian, Greg J. Duncan, Nathan A. Fox, Sarah Halpern-Meekin, Katherine Magnuson, Kimberly G. Noble, Hirokazu Yoshikawa
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Eukaryotic cell size regulation and its implications for cellular function and dysfunction Physiol. Rev. (IF 29.9) Pub Date : 2024-06-20 Yagya Chadha, Arohi Khurana, Kurt M. Schmoller
Physiological Reviews, Ahead of Print.
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Long‐term soil warming decreases soil microbial necromass carbon by adversely affecting its production and decomposition Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-21 Xiaofei Liu, Ye Tian, Jakob Heinzle, Erika Salas, Steve Kwatcho‐Kengdo, Werner Borken, Andreas Schindlbacher, Wolfgang Wanek
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Gut–liver highway of ALDH2 in drinking Nat. Metab. (IF 18.9) Pub Date : 2024-06-20 Subhash C. Pandey, Emir Malovic
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Coordinated action of a gut–liver pathway drives alcohol detoxification and consumption Nat. Metab. (IF 18.9) Pub Date : 2024-06-20 Yaojie Fu, Bryan Mackowiak, Yu-Hong Lin, Luca Maccioni, Taylor Lehner, Hongna Pan, Yukun Guan, Grzegorz Godlewski, Hongkun Lu, Cheng Chen, Shoupeng Wei, Dechun Feng, Janos Paloczi, Huiping Zhou, Pal Pacher, Li Zhang, George Kunos, Bin Gao
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Global pattern of organic carbon pools in forest soils Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-20 Yuxue Zhang, Xiaowei Guo, Longxue Chen, Yakov Kuzyakov, Ruzhen Wang, Haiyang Zhang, Xingguo Han, Yong Jiang, Osbert Jianxin Sun
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The challenge of estimating global termite methane emissions Glob. Change Biol. (IF 10.8) Pub Date : 2024-06-20 Stephanie J. Law, Steven D. Allison, Andrew B. Davies, Habacuc Flores‐Moreno, Baptiste J. Wijas, Abbey R. Yatsko, Yong Zhou, Amy E. Zanne, Paul Eggleton
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NADPH Alters DUOX1 Calcium Responsiveness Redox Biol. (IF 10.7) Pub Date : 2024-06-20 Gregory E. Conner
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Lactate drives epithelial-mesenchymal transition in diabetic kidney disease via the H3K14la/KLF5 pathway Redox Biol. (IF 10.7) Pub Date : 2024-06-20 Xuanxuan Zhang, Jicong Chen, Ruohui Lin, Yaping Huang, Ziyuan Wang, Susu Xu, Lei Wang, Fang Chen, Jian Zhang, Ke Pan, Zhiqi Yin
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Tissue-resident bacteria in metabolic diseases: emerging evidence and challenges Nat. Metab. (IF 18.9) Pub Date : 2024-06-19 Lucas Massier, Niculina Musat, Michael Stumvoll, Valentina Tremaroli, Rima Chakaroun, Peter Kovacs
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Brain-wide functional connectivity artifactually inflates throughout functional magnetic resonance imaging scans Nat. Hum. Behav. (IF 21.4) Pub Date : 2024-06-19 Cole Korponay, Amy C. Janes, Blaise B. Frederick
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Plant terpenoid biosynthetic network and its multiple layers of regulation Prog. Lipid. Res. (IF 14.0) Pub Date : 2024-06-19 Matthew E. Bergman, Ruy W.J. Kortbeek, Michael Gutensohn, Natalia Dudareva
Terpenoids constitute one of the largest and most chemically diverse classes of primary and secondary metabolites in nature with an exceptional breadth of functional roles in plants. Biosynthesis of all terpenoids begins with the universal five‑carbon building blocks, isopentenyl diphosphate (IPP) and its allylic isomer dimethylallyl diphosphate (DMAPP), which in plants are derived from two compartmentally
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Low energy availability increases immune cell formation of reactive oxygen species and impairs exercise performance in female endurance athletes Redox Biol. (IF 10.7) Pub Date : 2024-06-19 Jan S. Jeppesen, Hannah G. Caldwell, Lone O. Lossius, Anna K. Melin, Lasse Gliemann, Jens Bangsbo, Ylva Hellsten
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Discovery of genomic loci for liver health and steatosis reveals overlap with glutathione redox genetics Redox Biol. (IF 10.7) Pub Date : 2024-06-19 Rebecca L. Koch, James B. Stanton, Susan McClatchy, Gary A. Churchill, Steven W. Craig, Darian N. Williams, Mallory E. Johns, Kylah R. Chase, Dana L. Thiesfeldt, Jessica C. Flynt, Robert Pazdro