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Environmental control and metabolic strategies of organic‐matter‐responsive bacterioplankton in the Weddell Sea (Antarctica) Environ. Microbiol. (IF 4.3) Pub Date : 2024-07-18 Judith Piontek, Christiane Hassenrück, Birthe Zäncker, Klaus Jürgens
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The underground world of plant disease: Rhizosphere dysbiosis reduces above‐ground plant resistance to bacterial leaf spot and alters plant transcriptome Environ. Microbiol. (IF 4.3) Pub Date : 2024-07-16 Toi Ketehouli, Josephine Pasche, Victor Hugo Buttrós, Erica M. Goss, Samuel J. Martins
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The impact of fungi on soil protist communities in European cereal croplands Environ. Microbiol. (IF 4.3) Pub Date : 2024-07-13 Florine Degrune, Kenneth Dumack, Masahiro Ryo, Gina Garland, Sana Romdhane, Aurélien Saghaï, Samiran Banerjee, Anna Edlinger, Chantal Herzog, David S. Pescador, Pablo García‐Palacios, Anna Maria Fiore‐Donno, Michael Bonkowski, Sara Hallin, Marcel G. A. van der Heijden, Fernando T. Maestre, Laurent Philippot, Michael Glemnitz, Klaus Sieling, Matthias C. Rillig
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Determinants in the phage life cycle: The dynamic nature of ssDNA phage FLiP and host interactions under varying environmental conditions and growth phases Environ. Microbiol. (IF 4.3) Pub Date : 2024-07-02 Kati Mäkelä, Elina Laanto, Lotta‐Riina Sundberg
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Correction to “Xenobiotic estradiol‐17ß alters gut microbiota of hatchling American alligators (Alligator mississippiensis)” Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-25
Murphy, K.M., Watkins, M.M., Finger, J.W., Kelley, M.D., Elsey, R.M., Warner, D.A., Mendonça, M.T. (2022) Xenobiotic estradiol-17ß alters gut microbiota of hatchling American alligators (Alligator mississippiensis). Environmental Microbiology, 24(12), 6336–6347. https://doi.org/10.1111/1462-2920.16222 In Figure 2B, we report no statistical significance between treatment groups (P > 0.05) using a non-metric
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A genome catalogue of mercury‐methylating bacteria and archaea from sediments of a boreal river facing human disturbances Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-23 Charlène Lawruk‐Desjardins, Veronika Storck, Dominic E. Ponton, Marc Amyot, David A. Walsh
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Quantitative proteomics reveals the Sox system's role in sulphur and arsenic metabolism of phototroph Halorhodospira halophila Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-20 Giulia D'Ermo, Stéphane Audebert, Luc Camoin, Britta Planer‐Friedrich, Corinne Casiot‐Marouani, Sophie Delpoux, Régine Lebrun, Marianne Guiral, Barbara Schoepp‐Cothenet
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Multi‐omics analysis of antagonistic interactions among free‐living Pseudonocardia from diverse ecosystems Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-20 Jonathan Parra, Scott A. Jarmusch, Katherine R. Duncan
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Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-20 Brittan S. Scales, Christiane Hassenrück, Lynn Moldaenke, Julia Hassa, Christian Rückert‐Reed, Christoph Rummel, Corinna Völkner, Robby Rynek, Tobias Busche, Jörn Kalinowski, Annika Jahnke, Mechthild Schmitt‐Jansen, Katrin Wendt‐Potthoff, Sonja Oberbeckmann
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Pinpointing the microbiota of tardigrades: What is really there? Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-20 Bartłomiej Surmacz, Daniel Stec, Monika Prus‐Frankowska, Mateusz Buczek, Łukasz Michalczyk, Piotr Łukasik
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From ubiquity to specificity: The diverse functions of bacterial thioredoxin systems Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-20 Cyril Anjou, Aurélie Lotoux, Claire Morvan, Isabelle Martin‐Verstraete
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Development of a digital droplet PCR approach for the quantification of soil micro-organisms involved in atmospheric CO2 fixation Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-18 Marie Le Geay, Kyle Mayers, Martin Küttim, Béatrice Lauga, Vincent E. J. Jassey
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Genome-resolved metagenomics reveals the effect of nutrient availability on bacterial genomic properties across 44 European freshwater lakes Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-17 Manan Shah, Till L. V. Bornemann, Julia K. Nuy, Martin W. Hahn, Alexander J. Probst, Daniela Beisser, Jens Boenigk
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Genome-resolved metagenomics reveals diverse taxa and metabolic complexity in Antarctic lake microbial structures Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-16 Carla Greco, Dale T. Andersen, Marian L. Yallop, Gary Barker, Anne D. Jungblut
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Isolation and characterization of a phage collection against Pseudomonas putida Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-11 Age Brauer, Sirli Rosendahl, Anu Kängsep, Alicja Cecylia Lewańczyk, Roger Rikberg, Rita Hõrak, Hedvig Tamman
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Comparative proteomics of a versatile, marine, iron-oxidizing chemolithoautotroph Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-11 Roman A. Barco, N. Merino, B. Lam, B. Budnik, M. Kaplan, F. Wu, J. P. Amend, K. H. Nealson, D. Emerson
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Differential response of bacteria and fungi to drought on the decomposition of Sarcocornia fruticosa woody stems in a saline stream Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-07 Anna Doménech-Pascual, Lorena Carrasco-Barea, Frederic Gich, Judit Boadella, Zeus Freixinos Campillo, Rosa Gómez Cerezo, Andrea Butturini, Anna M. Romaní
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A polyethylene surrogate for microbial community enrichment and characterization Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-06 Bilge Bahar Camur, Natalia Calixto Mancipe, Brett M. Barney
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The community of root fungi is associated with the growth rate of Norway spruce (Picea abies) Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-05 Leena Hamberg, Jarno Vanhatalo, Sannakajsa Velmala, Andy F. S. Taylor, John MacKay, Sébastien Caron, Fred O. Asiegbu, Risto Sievänen, Pasi Raumonen, Tuija Hytönen, Taina Pennanen
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Local environment shapes milk microbiomes while evolutionary history constrains milk macronutrients in captive cercopithecine primates Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-03 Sally L. Bornbusch, Hannah E. Shinnerl, Lindsey Gentry, Mia M. Keady, Virginia Glick, Carly R. Muletz-Wolz, Michael L. Power
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Temporal and spatial dynamics within the fungal microbiome of grape fermentation Environ. Microbiol. (IF 4.3) Pub Date : 2024-06-01 Cristobal A. Onetto, Chris M. Ward, Steven Van Den Heuvel, Laura Hale, Kathleen Cuijvers, Anthony R. Borneman
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Macroalgal eukaryotic microbiome composition indicates novel phylogenetic diversity and broad host spectrum of oomycete pathogens Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-31 Natalia Timanikova, Kyle Fletcher, Jon‐Wong Han, Pieter van West, Steve Woodward, Gwang‐Hoon Kim, Frithjof C. Küpper, Marius Wenzel
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Microbiome and floral associations of a wild bee using biodiversity survey collections Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-31 Phuong N. Nguyen, Farida Samad‐zada, Katherine D. Chau, Sandra M. Rehan
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Genetic diversity of the banana Fusarium wilt pathogen in Cuba and across Latin America and the Caribbean Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-24 Einar Martínez‐de la Parte, Luis Pérez‐Vicente, David E. Torres, Anouk van Westerhoven, Harold J. G. Meijer, Michael F. Seidl, Gert H. J. Kema
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Correction to “Preventing multiresistance: New insights for managing fungal adaptation” Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-24
Ballu, A., Ugazio, C., Duplaix, C., Noly, A., Wullschleger, J., Torriani, S.F.F., Dérédec A., Carpentier F., Walker A.S. (2024) Preventing multi-resistance: new insights for managing fungal adaptation. Environmental Microbiology, 26(4), e16614. Available from: https://doi.org/10.1111/1462-2920.16614 In the title, the text “Preventing multi-resistance: New insights for managing fungal adaptation” was
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Prophages carrying Zot toxins on different Vibrio genomes: A comprehensive assessment using multilayer networks Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-23 Esteban F. Soto, Melissa Alegría, Felipe Sepúlveda, Katherine García, Gastón Higuera, Daniel Castillo, Francisco E. Fontúrbel, Roberto Bastías
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Genome analysis and description of Tunturibacter gen. nov. expands the diversity of Terriglobia in tundra soils Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-22 Adriana Messyasz, Minna K. Männistö, Lee J. Kerkhof, Max M. Häggblom
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Critical steps in an environmental metaproteomics workflow Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-18 Daniel J. Nebauer, Leanne A. Pearson, Brett A. Neilan
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Unveiling the role of novel carbohydrate‐binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-17 Marie‐Katherin Zühlke, Elizabeth Ficko‐Blean, Daniel Bartosik, Nicolas Terrapon, Alexandra Jeudy, Murielle Jam, Fengqing Wang, Norma Welsch, Alexandra Dürwald, Laura Torres Martin, Robert Larocque, Diane Jouanneau, Tom Eisenack, François Thomas, Anke Trautwein‐Schult, Hanno Teeling, Dörte Becher, Thomas Schweder, Mirjam Czjzek
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Examining the impacts of salt specificity on freshwater microbial community and functional potential following salinization Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-17 Jonathon B. Van Gray, Paul Ayayee
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Biogeography and impact of nitrous oxide reducers in rivers across a broad environmental gradient on emission rates Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-17 Sibo Zhang, Xinghui Xia, Leilei Yu, Shaoda Liu, Xiaokang Li, Junfeng Wang, Yue Zheng, Lanfang Han, Qian Tan, Zhifeng Yang
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Habitat conditions and not moss composition mediate microbial community structure in Swiss peatlands Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-17 Rachel Korn, Christian Berg, Louis‐Félix Bersier, Sarah M. Gray, Gerhard G. Thallinger
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Enhancement of soil aggregation and physical properties through fungal amendments under varying moisture conditions Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-11 Violeta Angulo, Robert‐Jan Bleichrodt, Jan Dijksterhuis, Amandine Erktan, Mariet M. Hefting, Bart Kraak, George A. Kowalchuk
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The size and diversity of microbes determine carbon use efficiency in soil Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-11 Chansotheary Dang, Ember M. Morrissey
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Specificities and commonalities of the Planctomycetes plasmidome Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-11 María del Mar Quiñonero‐Coronel, Damien Paul Devos, M. Pilar Garcillán‐Barcia
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Modelling dynamics between free‐living amoebae and bacteria Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-08 Marwa Ali, Christopher A. Rice, Andrew W. Byrne, Philip E. Paré, Wendy Beauvais
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Diverse fates of ancient horizontal gene transfers in extremophilic red algae Environ. Microbiol. (IF 4.3) Pub Date : 2024-05-02 Julia Van Etten, Timothy G. Stephens, Erin Chille, Anna Lipzen, Daniel Peterson, Kerrie Barry, Igor V. Grigoriev, Debashish Bhattacharya
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Resting cells of Skeletonema marinoi assimilate organic compounds and respire by dissimilatory nitrate reduction to ammonium in dark, anoxic conditions Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-23 Rickard Stenow, Elizabeth K. Robertson, Olga Kourtchenko, Martin J. Whitehouse, Matthew I. M. Pinder, Giovanna Benvenuto, Mats Töpel, Anna Godhe, Helle Ploug
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Using digital PCR to predict ciliate abundance from ribosomal RNA gene copy numbers Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-23 Megan Gross, Micah Dunthorn, Quentin Mauvisseau, Thorsten Stoeck
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Revealing the genetic traits of the foodborne microbial genus Hafnia: Implications for the human gut microbiome Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-22 Federico Fontana, Giulia Longhi, Elisa Carli, Giulia Alessandri, Leonardo Mancabelli, Gabriele Andrea Lugli, Chiara Tarracchini, Alice Viappiani, Rosaria Anzalone, Francesca Turroni, Christian Milani, Marco Ventura
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Defence systems and horizontal gene transfer in bacteria Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-21 Roman Kogay, Yuri I. Wolf, Eugene V. Koonin
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Unveiling the culturable and non-culturable actinobacterial diversity in two macroalgae species from the northern Portuguese coast Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-16 Mariana Girão, Diogo A. M. Alexandrino, Weiwei Cao, Isabel Costa, Zhongjun Jia, Maria F. Carvalho
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Clonal genomic population structure of Beauveria brongniartii and Beauveria pseudobassiana: Pathogens of the common European cockchafer (Melolontha melolontha L.) Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-15 Chiara Pedrazzini, Stephen A. Rehner, Hermann Strasser, Niklaus Zemp, Rolf Holderegger, Franco Widmer, Jürg Enkerli
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Microorganisms uniquely capture and predict stony coral tissue loss disease and hurricane disturbance impacts on US Virgin Island reefs Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-05 Cynthia C. Becker, Laura Weber, Joel K. Llopiz, T. Aran Mooney, Amy Apprill
Coral reef ecosystems are now commonly affected by major climate and disease disturbances. Disturbance impacts are typically recorded using reef benthic cover, but this may be less reflective of other ecosystem processes. To explore the potential for reef water‐based disturbance indicators, we conducted a 7‐year time series on US Virgin Island reefs where we examined benthic cover and reef water nutrients
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Preventing multi‐resistance: New insights for managing fungal adaptation Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-04 Agathe Ballu, Claire Ugazio, Clémentine Duplaix, Alicia Noly, Juerg Wullschleger, Stefano F. F. Torriani, Anne Dérédec, Florence Carpentier, Anne‐Sophie Walker
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Multiple toxins and a protease contribute to the aphid‐killing ability of Pseudomonas fluorescensPpR24 Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-02 Deepa Paliwal, Mojgan Rabiey, Tim H. Mauchline, Keywan Hassani‐Pak, Ralf Nauen, Carol Wagstaff, Simon Andrews, Chris Bass, Robert W. Jackson
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Microbial hitchhikers on microplastics: The exchange of aquatic microbes across distinct aquatic habitats Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-02 Máté Vass, Kesava Priyan Ramasamy, Agneta Andersson
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Wolbachia infection negatively impacts Drosophila simulans heat tolerance in a strain‐ and trait‐specific manner Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-01 Liam F. Ferguson, Perran A. Ross, Belinda van Heerwaarden
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Experimental evidence of d‐glutamate racemase activity in the uncultivated bacterium Candidatus Saccharimonas aalborgensis Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-01 Marcos Peñalver, Alberto Paradela, César Palacios‐Cuéllar, M. Graciela Pucciarelli, Francisco García‐del Portillo
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The distinctive weathering crust habitat of a High Arctic glacier comprises discrete microbial micro‐habitats Environ. Microbiol. (IF 4.3) Pub Date : 2024-04-01 Sara M. E. Rassner, Joseph M. Cook, Andrew C. Mitchell, Ian T. Stevens, Tristram D. L. Irvine‐Fynn, Andrew J. Hodson, Arwyn Edwards
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Host population crashes disrupt the diversity of associated marine microbiomes Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-23 William S. Pearman, Sergio E. Morales, Felix Vaux, Neil J. Gemmell, Ceridwen I. Fraser
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Out of sight, but not out of season: Nitrifier distributions and population dynamics in a large oligotrophic lake Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-22 Logan M. Peoples, Miranda H. Seixas, Kate A. Evans, Evan M. Bilbrey, John R. Ranieri, Tyler H. Tappenbeck, John E. Dore, Adam Baumann, Matthew J. Church
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A single Prochlorococcus ecotype dominates the tropical Bay of Bengal with ultradian growth Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-22 Jonathan Grone, Camille Poirier, Kathleen Abbott, Fabian Wittmers, Gualtiero Spiro Jaeger, Amala Mahadevan, Alexandra Z. Worden
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How good are global DNA‐based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-21 Fernando Useros, Iván García‐Cunchillos, Nicolas Henry, Cédric Berney, Enrique Lara
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Investigating the inoculum dynamics of Cladosporium on the surface of raspberry fruits and in the air Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-21 Lauren Helen Farwell, Matevz Papp‐Rupar, Greg Deakin, Naresh Magan, Xiangming Xu
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Phototrophic Fe(II) oxidation by Rhodopseudomonas palustris TIE‐1 in organic and Fe(II)‐rich conditions Environ. Microbiol. (IF 4.3) Pub Date : 2024-03-20 Verena Nikeleit, Markus Maisch, James M. Byrne, Caroline Harwood, Andreas Kappler, Casey Bryce