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Predicting phage–host specificity Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-19 Ashley York
In a recent study, Gaborieau, Vaysset, Tesson et al. developed a method to predict phage–host specificity using genomic data.
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Designer viral receptors Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-19 Ashley York
In a recent study, Liu, Huang, Guo, McCallum et al. present a method to create functional, customized coronavirus receptors, which could facilitate the development of infection models that do not rely on native receptors.
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Iron gatekeeper in malaria Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-19 Ashley York
Loveridge and Sigala uncover a divalent metal transporter that is required for cellular iron metabolism in Plasmodium falciparum parasites.
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Gut microbiota clocks in stress Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-18 Agustina Taglialegna
In this study, Tofani et al. demonstrate that the gut microbiota regulates stress responsiveness in mice via the circadian system.
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Waning resistance Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-18 Andrea Du Toit
This study provides insights into how adaptive changes in evolved microbial communities can affect pathogen invasion.
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Antibiotic-recalcitrant Salmonella during infection Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-18 Rachel T. Giorgio, Sophie Helaine
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A mimic targets intracellular Staphylococcus aureus Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-14 Agustina Taglialegna
In this study, Ge et al. develop a mimic of natural killer cells to target and eliminate intracellular Staphylococcus aureus.
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A river of resistant genes uncovered by metagenomics Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-14 Onalenna Neo, Nisha Singh, Adrian Cazares
This Genome Watch discusses the use of metagenomic sequencing to investigate resistome dynamics in river ecosystems and their associations with the mobilome and microbiome, underscoring the role of rivers as reservoirs of antimicrobial resistance genes.
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Gender justice and prioritizing women and girls in the HIV response Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-14 Nazneen Damji, Lillian Mworeko
A strategic dialogue on ‘gender justice in the HIV response’ held at the 25th International AIDS Conference highlighted how bias and discrimination against women and girls in all their diversities disadvantages them in the HIV response. Ending AIDS requires increased participation and leadership by diverse women at all levels of the HIV response.
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In tandem towards resistance Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-13 Andrea Du Toit
This study shows that high-level resistance in methicillin-resistant Staphylococcus aureus involves an alternative mode of cell division.
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Microbial solutions must be deployed against climate catastrophe Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-11 Raquel Peixoto, Christian R. Voolstra, Lisa Y. Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A. Amin, Max Häggblom, Ann Gregory, Thulani P. Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T. Lennon, Antonio Ventosa, Patrik M. Bavoil, Virginia Miller, Jack A. Gilbert
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The microbial phosphorus cycle in aquatic ecosystems Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-11 Solange Duhamel
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Streptococcus pneumoniae epidemiology, pathogenesis and control Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-11-06 Ana Rita Narciso, Rebecca Dookie, Priyanka Nannapaneni, Staffan Normark, Birgitta Henriques-Normark
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Microbiome-colonizing RNAs Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-30 Andrea Du Toit
This study describes the discovery of a previously uncharacterized phylogenetically distinct group of viroid-like human microbiome-associated RNAs.
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Anti-defence islands in plasmids Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-23 Andrea Du Toit
This new study shows that the leading region of plasmids has a key role in overcoming host immunity by functioning as ‘anti-defence islands’ that protect the invading plasmid following entry.
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Examining the healthy human microbiome concept Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-23 Raphaela Joos, Katy Boucher, Aonghus Lavelle, Manimozhiyan Arumugam, Martin J. Blaser, Marcus J. Claesson, Gerard Clarke, Paul D. Cotter, Luisa De Sordi, Maria G. Dominguez-Bello, Bas E. Dutilh, Stanislav D. Ehrlich, Tarini Shankar Ghosh, Colin Hill, Christophe Junot, Leo Lahti, Trevor D. Lawley, Tine R. Licht, Emmanuelle Maguin, Thulani P. Makhalanyane, Julian R. Marchesi, Jelle Matthijnssens, Jeroen
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Harnessing symbiotic bacteria for disease control Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-21 Abraham Morales-Cruz, Leo A. Baumgart
This Genome Watch explores recent transcriptomic and metatranscriptomic analyses that revealed the key role of secondary endosymbionts in host immunity and disease transmission within their insect or plant hosts.
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Diversity and ecology of microbial sulfur metabolism Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-17 Zhichao Zhou, Patricia Q. Tran, Elise S. Cowley, Elizabeth Trembath-Reichert, Karthik Anantharaman
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Bloodstream infections: mechanisms of pathogenesis and opportunities for intervention Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-17 Caitlyn L. Holmes, Owen R. Albin, Harry L. T. Mobley, Michael A. Bachman
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A gut bacterium trims mucosal immunity Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-15 Agustina Taglialegna
In this study, Lu et al. identify the gut symbiont Tomasiella immunophila as a contributor to the degradation of murine secretory immunoglobulin A, with effects on mucosal immunity.
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Re-emergence of Oropouche virus Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-15 Agustina Taglialegna
The recent re-emergence of Oropouche virus in Central and South America and the Caribbean poses a public health threat and highlights the need for improved surveillance and control measures.
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Anthropogenic impacts on the terrestrial subsurface biosphere Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-15 Kaela K. Amundson, Mikayla A. Borton, Michael J. Wilkins
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Akkermansia muciniphila: biology, microbial ecology, host interactions and therapeutic potential Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-15 Athanasia Ioannou, Maryse D. Berkhout, Sharon Y. Geerlings, Clara Belzer
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The gut microbiome and dietary fibres: implications in obesity, cardiometabolic diseases and cancer Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-10 Nathalie M. Delzenne, Laure B. Bindels, Audrey M. Neyrinck, Jens Walter
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Bacterial small molecule metabolites implicated in gastrointestinal cancer development Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-07 Tayah Turocy, Jason M. Crawford
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Towards next-generation treatment options to combat Plasmodium falciparum malaria Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-10-04 John Okombo, David A. Fidock
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Microbial extracellular polymeric substances in the environment, technology and medicine Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-27 Hans-Curt Flemming, Eric D. van Hullebusch, Brenda J. Little, Thomas R. Neu, Per H. Nielsen, Thomas Seviour, Paul Stoodley, Jost Wingender, Stefan Wuertz
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Publisher Correction: Microorganisms, climate change, and the Sustainable Development Goals: progress and challenges Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-20 Janet K. Jansson
Correction to: Nature Reviews Microbiology https://doi.org/10.1038/s41579-023-00953-8, published online 27 July 2023.
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The rising mpox crisis Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-20 Agustina Taglialegna
An increasing number of countries in Africa are reporting cases of mpox, prompting the World Health Organization to declare it a public health emergency of international concern.
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ISME19 Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-20 Agustina Taglialegna
Nature Reviews Microbiology attended the 19th biennial meeting of the International Society for Microbial Ecology (ISME) in Cape Town, South Africa.
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Publisher Correction: Unveiling plasmid diversity in nature Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-19 Antonio Pedro Camargo
Correction to: Nature Reviews Microbiology https://doi.org/10.1038/s41579-024-01093-3, published online 28 August 2024.
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Challenges and strategies for addressing antibacterial drug resistance in LMICs Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-13 Ursula Theuretzbacher
Antibacterial drug resistance is a critical global health issue that affects countries across all economic levels, though it disproportionately affects populations in low- and middle-income countries. Infection and resistance rates vary considerably, necessitating tailored interventions to meet the specific demands of each area. This underscores the need for global solidarity and national accountability
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Achieving sustainable access to antibiotics is more than just a last mile challenge Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-13 Manica Balasegaram, Viviana Muñoz Tellez
Improving access to antibiotics will save lives and reduce the rise and spread of drug-resistant infections. Instead of traditional ‘last mile’ global health solutions, global leaders need to support efforts to develop suitable antibiotics and their rational use, ensuring that countries have the capacity to make them available.
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Stronger commitment and faster action against antimicrobial resistance Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-13
As the United Nations convenes its second High-Level Meeting on antimicrobial resistance, urgent global action is needed. This Focus issue draws attention to pressing challenges of bacterial antimicrobial resistance and underscores the need for fast and coordinated international efforts.
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No viral rebound Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-10 Andrea Du Toit
A new study reports sustained HIV remission in an individual who underwent allogeneic haematopoietic stem cell transplantation with cells from a donor with wild-type CCR5.
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Rediscovering plasmid-dependent phages Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-09 Daniel Cazares, Wendy Figueroa, Adrian Cazares
This Genome Watch highlights how the revived interest in phages that target plasmid-carrying bacteria is expanding our knowledge of viral diversity, ecology and evolution, which is fundamental for developing safe biotherapeutics.
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Urinary tract infections: pathogenesis, host susceptibility and emerging therapeutics Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-09 Morgan R. Timm, Seongmi K. Russell, Scott J. Hultgren
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Bacterial siderophores: diversity, uptake pathways and applications Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-05 Isabelle J. Schalk
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Things go sour in C. rodentium infection Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-09-02 Andrea Du Toit
This study shows that Citrobacter rodentium alters its growth and virulence in response to varying intestinal pH, and, in turn, the host actively induces stomach acidification.
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Unveiling plasmid diversity in nature Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-28 Antonio Pedro Camargo
This Genome Watch highlights recent metagenomic surveys that have revealed the extensive prevalence and diversity of plasmids in the human gut microbiome and discusses the challenges in accurately reporting plasmid genomes identified from metagenomic data.
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Terrabacteria: redefining bacterial envelope diversity, biogenesis and evolution Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-28 Basile Beaud Benyahia, Najwa Taib, Christophe Beloin, Simonetta Gribaldo
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Testing fast with uRAST Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-20 Agustina Taglialegna
In this study, Kim, Kang, Jang et al. report a phenotype-based, ultra-rapid and blood culture-free antimicrobial susceptibility testing approach.
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From soil to battling antimicrobial resistance Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-20 Agustina Taglialegna
In this study, Li, Feng et al. identify an antimicrobial compound produced by plant root-associated Pseudomonas fluorescens with potent activity against drug-resistant, Gram-positive bacteria.
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Tagging for degradation — bacteria do it too Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-19 Francesca Ester Morreale
In this Journal Club, Francesca Ester Morreale revisits a paper reporting that arginine phosphorylation marks proteins for degradation in bacteria.
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Harnessing the plant microbiome for sustainable crop production Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-15 Stéphane Compant, Fabricio Cassan, Tanja Kostić, Linda Johnson, Günter Brader, Friederike Trognitz, Angela Sessitsch
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Targeting the spread of antimicrobial resistance plasmids Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-13 Ashley York
A recent study demonstrates targeting plasmid-encoded bacterial proteins containing immunoglobulin-like domains to prevent the conjugation and spread of antimicrobial resistance plasmids.
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Towards improved biofilm models Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-08-07 Kendra P. Rumbaugh, Marvin Whiteley
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Designer antibiotics Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-29 Andrea Du Toit
This study used structure-based drug design and modular synthesis to identify small molecules with antimicrobial activity.
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Highly pathogenic H5N1 avian influenza virus outbreak in cattle: the knowns and unknowns Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-25 Gabriele Neumann, Yoshihiro Kawaoka
Highly pathogenic avian influenza (HPAI) viruses have occasionally infected humans, often with severe outcomes. Reports of HPAI in dairy cattle and the detection of high titres of the virus in cattle milk in the United States are therefore a cause for concern. Documented human infections linked to cattle infections, though mild, highlight the urgent need for enhanced biosecurity and vigilant monitoring
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Leave no transcripts behind Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-24 Madelyn Moy, Cecilia Kyany’a, Mailis Maes
This Genome Watch highlights the advances made in bacterial single-cell RNA sequencing, specifically in the context of host–microorganism interaction studies.
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Healthcare as a driver, reservoir and amplifier of antimicrobial resistance: opportunities for interventions Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-24 Derek Cocker, Gabriel Birgand, Nina Zhu, Jesus Rodriguez-Manzano, Raheelah Ahmad, Kondwani Jambo, Anna S. Levin, Alison Holmes
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The oral–gut microbiome axis in health and disease Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-22 Benoit J. Kunath, Charlotte De Rudder, Cedric C. Laczny, Elisabeth Letellier, Paul Wilmes
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The indoors microbiome and human health Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-19 Jack A. Gilbert, Erica M. Hartmann
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Malaria vaccines: a new era of prevention and control Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-18 Patrick E. Duffy, J. Patrick Gorres, Sara A. Healy, Michal Fried
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Tearing CRISPR apart Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-17 Andrea Du Toit
This study shows that the anti-CRISPR protein AcrIF25 inhibits the type I-F CRISPR–Cas system by pulling apart the fully assembled Csy complex.
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Indirect intervention Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-16 Andrea Du Toit
This study shows that accounting for spillover effects increased the cost-effectiveness of combined malaria-elimination interventions.
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Cross-kingdom nutrient exchange in the plant–arbuscular mycorrhizal fungus–bacterium continuum Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-16 Shilong Duan, Gu Feng, Erik Limpens, Paola Bonfante, Xianan Xie, Lin Zhang
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The interplay between diet and the gut microbiome: implications for health and disease Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-15 Fiona C. Ross, Dhrati Patangia, Ghjuvan Grimaud, Aonghus Lavelle, Eugene M. Dempsey, R. Paul Ross, Catherine Stanton
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Busting Cryptococcus with brilacidin Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-08 Agustina Taglialegna
In this study, Diehl et al. report that brilacidin could be a promising antifungal drug against Cryptococcus neoformans.
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Getting wound closure with Alcaligenes Nat. Rev. Microbiol. (IF 69.2) Pub Date : 2024-07-08 Agustina Taglialegna
In this study, White et al. report that Alcaligenes faecalis mediates wound repair in diabetic foot ulcers.