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1.Guoqing Liu, Yongqiang Xing, Hongyu Zhao, Jianying Wang, Yu Shang and Lu Cai*, A deformation energy-based model for predicting nucleosome dyads and occupancy. Sci. Rep. 2016, 6:24133(SCI, IF5.578)
2.Yongqiang Xing, Xiujuan Zhao, Tao Yu, Dong Liang, Jun Li, Guanyun Wei, Guoqing Liu, Xiangjun Cui, Hongyu Zhao, Lu Cai*, MiasDB: A Database of Molecular Interactions Associated with Alternative Splicing of Human Pre-mRNAs. Plos One, 2016, 11(5): e0155443. (SCI, IF3.234)
3.Xiang-Jun CuiLu Cai, Yong-Qiang Xing, Xiu-Juan Zhao, Chen-Xia Shi,Influence factors on the correlations between expression levels of neighboring pattern genes. Biosystem, 2016, 139:23-28. (SCI, IF1.784)
4.Guoqing Liu*, Yongqiang Xing, Lu Cai*. Using weighted features to predict recombination hotspots in Saccharomy cescerevisiae. Journal of Theoretical Biology, 2015, 382:15-22 (SCI, IF2.5)
5.Hongyu Zhao, Yongqiang Xing, Guoqing Liu, Ping Chen, Xiujuan Zhao, Guohong Li*, Lu Cai*. GAA triplet-repeats cause nucleosome depletion in the human genome. Genomics, 2015, 106:88-95 (SCI, IF3.32)
6.G-Q Liu* F Feng X-J Zhao and L Cai*, Nucleosome Organization around Pseudogenes in the Human GenomeHindawi Publishing Corporation. BioMed Research International 2015, Article ID 821596 (SCI IF1.579)
7.Wantong Si, Jumei Liu, Lu Cai, Haiming Jiang, Chunli Zheng, Xiaoying He, Jianying Wang and Xuefeng Zhang. Health Risks of Metals in Contaminated Farmland Soils and Spring Wheat Irrigated with Yellow River Water in Baotou, China. Bull Environ Contam Toxicol (2015) 94:214–219
8.Alok Sharma, Hieu Nguyen, Lu Cai and Hua Lou, Histone hyperacetylation and exon skipping: a calcium-mediated dynamic regulation in cardiomyocytes. Nucleus, 2015, 6(4):273-278 (SCI IF3.15)
9.Yongqiang Xing, Guoqing Liu, Xiujuan Zhao, Hongyu Zhao and Lu Cai*, Genome-wide characterization and prediction of Arabidopsis thaliana replication origins. Biosystem 2014, 124:1-6 (SCI, IF1.784)
10.Binjie Zang,Guoqing Liu and Lu Cai, Predicting recombination hot/cold spots in Saccharomyces cerevisiae from multiple information. Chinese SCI Bull. 2014; 59(11):953. (SCI, IF1.321)
11.Yong-qiang Xing & Guo-qing Liu & Xiu-juan Zhao &Lu Cai*,An analysis and prediction of nucleosome positioning based on information content. Chromosome Res. (2013) 21:63–74 (SCI, IF3.23)
12.Chunli Zheng Yanjun Li Li Nie Lin Qian Lu Cai* Jianshe Liu, Transcriptional and Functional Studies of a Cd(II)/Pb(II)-Responsive Transcriptional Regulator(CmtR)from Acidithiobacillus ferrooxidans ATCC 23270. Curr. Microbiol. 2012: 65(2):117-121 (SCI, IF1.33)
13.Guoqing Liu; Jia Liu; Xiangjun Cui; Lu Cai, Sequence-dependent prediction of recombination hotspots in Saccharomyces cerevisiae J Theor. Biol. (2012) 293: 49-54 (SCI, IF2.5)
14.Yongqiang Xing Xiujuan Zhao and Lu Cai*, Prediction of nucleosome occupancy in Saccharomyces cerevisiae using position-correlation scoring function. Genomics (2011) 98:359-366 (SCI, IF3.32)
15.Libing Ma, Lu Cai, Jiajia Li, Xiuli Chen and Fengyu Ji, Two-staged nuclear transfer can enhance the developmental ability of goat–sheep interspecies nuclear transfer embryos in vitro. In Vitro Cell Dev Biol Anim. (2011) 47(2):95-103. (SCI, IF1.49)
16.Jiantao Yu, Maozu Guo, Chris J. Needham, Yangchao Huang, Lu Cai and David R. Westhead, Simple sequence-based kernels do not predict protein-protein interactions. Bioinformatics (2010) 26(20):2610-2614 (SCI, IF 4.926)
17.Xiujuan Zhao Zhiyong Pei Jia Liu and Lu Cai*, Prediction of Nucleosome DNA Formation Potential and Nucleosome Positioning Using Increment of Diversity Combined with Quadratic Discriminant Analysis, Chromosome Res. (2010) 18:777-785 (SCI, IF 3.23)
18.Guoqing Liu, Hong Li, Lu Cai. Processed pseudogenes are located preferentially in regions of low recombination rates in the human genome. (2010) J. Evol. Biol. 23(5):1107–1115. (SCI, IF: 3.4)
19.S-H Kim, Lu Cai, M. J. Pytlos, and R. R. Sinden, Ligation of (CAG)n•(CTG)n repeats flanked with only G and C overhang ends produces long uninterrupted repeats in vitro. (2005) BioTechniques 38(2) 247-253 (SCI, IF2.38)
20.Lu Cai, DNA Curvature of (CCTG)n·(CAGG)n and (ATTCT)n·(AGAAT)n Repeats Sequences, (2005) International J Mod. Phys. B 19(15-17) 2921-2926 (SCI 0.7)
21.Lu Tsai, Liaofu Luo and Zhirong Sun, Sequence-dependent flexibility in promoter sequences. (2002) J.Biomolec. Struc. Dynam. 20(1), 127-134 (SCI, IF 1.8)
22.Lu Tsai and Zhirong Sun, The dynamic flexibility in Escherichia coli genome. (2001). FEBS Letters 507(2),225-230. (SCI IF 3.7)
23.Lu Tsai and Liaofu Luo, A statistical mechanical model for predicting B-DNA curvature and flexibility (2000, 11 月) J. Theor. Biol. 207, 177-194 (SCI IF2.5)
24.Liaofu Luo, Weijiang Lee , Lijun Jia, Fengmin Ji and Lu Tsai, Statistical correlation of nucleotides in a DNA sequence, Phys. Rev. E,1998,Vol.58,No.1,861 (SCI, IF2.0)
25.Liaofu Luo Lu Tsai and Weijiang Lee, Model of evolution of Molecular Sequence, Phys. Rev. A ,1990,Vol.41,5441-5450 (SCI, IF3.047)
26.L.F.Luo L.Tsai and Y.M.Zhou,The informational parameters of nucleic acid and molecular evolution, J. Theor. Biol.,1988,Vol.130,351-361 (SCI, IF2.264)
27.Luo Liaofu and Cai Lu,Squeezing effect from photon scattering,Chinese Phys. Lett. 1986, Vol.3 No.145-47 (SCI, IF1.135)
28.Luo Liaofu and Cai Lu,Fractal dimension of Nucleic Acid sequences and Its Relation to Evolutionary Level,Chinese Phys. Lett.,1988,Vol.5,No.9,421 (SCI, IF1.135)
EI、ISTP收录论文(*号为责任作者)
29.XiangJi, Jinrong Wang, Xiaoli Miao, Kaihua Liu and Lu Cai*. Stress of nutrients deficiency on growth and lipid accumulation in oil-rich Navicula sp. Applied Mechanics and Materials, v 521, p 68-71, 2014, Sustainable Energy (EI: 20141117442278)
30.Lu Cai, Zhiyong Pei, Sheng Qin and Xiujuan Zhao Prediction of Protein-Protein Interactions in Saccharomyces cerevisiae Based on Protein Secondary Structure 2012 International Conference on Biomedical Engineering and Biotechnology (ICBEB) Marco, 413-415 (EI:20124015484716)
31.Ji Xiang Zhang Shaomig and Cai Lu* A two-step heterogeneous catalyzed process for biodiesel production Advanced Materials Research, v 512-515, p 330-333, 2012, Renewable and Sustainable Energy II (EI:20122315084505 CPCI-S WOS:000312119900066)
32.Wang Lei Wang Wangui Ji Xiang andCai Lu* Screening of lignin-degrading fungus and its potential use in biopulping 16th International Symposium on Wood, Fiber and Pulping Chemistry - Proceedings, ISWFPC, v 2, p 1158-1162, 2011, (EI:20120314681441)
33.Hongyu Zhao, Yue Zhao, Rong Chai, Lu Cai*,Instability of the DNA repeats mutation in humans hereditary disorders,2011 International Conference on Remote Sensing, Environment and Transportation Engineering(RSETE 2011),6899-6902.(EI:20113614293516)
34.Lei Wang Wangui Wang Xiang Ji and Lu Cai*, Biodegradation of lignin by the white rot fungus Polyporus varius and its promising potential for biopulping. ICMREE2011-Proceedings 2011 International Conference on Materials for Renewable Energy and Environment, v 1, p 464-468, 2011 (EI 20113014174557)
35.Xiang Ji Zhihui Zhang and Lu Cai*, Culture of chlorella spp and optimization of growth condition. Applied Mechanics and Materials, v 71-78, p 2887-2890, 2011, Frontiers of Green Building, Materials and Civil Engineering (EI:20114414470614)
36.Lu Cai, Sheng Qin and Zhiyong Pei. Hub-protein classification and interaction rules in protein-protein interaction networks in Saccharomyces cerevisiae. FSKD'11 2011,shanghai. (EI20114014401024)
37.Lu Cai and Ji Xiang. Studies on the Isolation of Lipase-producing Strain and Immobilized Condition. Asia-Pacific Power and Energy Engineering Conference (APPEEC 2010), 2010.3 -Proceedings (EI 20102212971455)
38.Xiujuan Zhao, Zhiyong Pei, Jia Liu, Sheng Qin, Songye Ren , Lu Cai* Nucleosome Positioning Prediction in C. elegans Based on Increment of Diversity combined with quadratic discriminant analysis. The 3rd International Conference on Advanced Computer Theory and Engineering (ICACTE 2010) V1-266-268 (EI:20104613373624)
39.Lu Cai, Jia Liu and Xiujuan Zhao, Protein-Protein Interaction Prediction Using Increment of Diversity Combined with Quadratic Discriminant Analysis. The 2010 International Congress on Computer Applications and Computational Science (CACS 2010), December 2010, Singapore (EI)
40.季祥, 张智慧, 蔡禄*. Technology of producing biodiesel from spent bleaching earth. Power and Energy Engineering Conference (PEEC 2010) September 2010, Wuhan, 231-233 (ISTP:000290185600053)
41.季祥,王金荣,蔡禄*. 营养盐胁迫对富油舟形藻生长和油脂积累的影响研究中国可再生能源科技发展大会论文集 (2010) 920-922. (ISTP)
42.于建涛,郭茂祖,蔡禄. 蛋白质相互作用及其网络预测方法研究进展.(2007年12月)电子学报,35(B12):1-7. (EI, 082411312783)
43.蔡禄,孙之荣,大肠苷菌基因组结构柔性的研究,(2001,12月) 电子学报, 29(12A), 1759-1761 (EI:2002256980727)
44.展铁政,蔡禄,张春燕,CdS/CdTe--CdS/Cu2S异质二重结薄膜太阳能电池的设计与计算,太阳能学报,1994,Vol.15,No.1, 50-56(EI:1994011197398)
45.展铁政,张春燕,蔡禄,多晶CdS/Cu2S异质结太阳能光电流及转换效率的计算,太阳能学报,1993,Vol.14,No.4,317-324 (EI, 1994071333550)
46.Lu Cai, A statistical mechanical model on sequence-dependent DNA dynamic structure, (2004.9) International Workshop on Structures and Dynamics of Free and Deposited Clusters, Lanzhou, China (ISTP 955PE)
47.Tsai Lu and Luo Liaofu, The empirical prediction of B-DNA local helical twist and related theoretical implications, Proceedings of International symposium on Theor. biophys. and Biomath.1997,Inner Mongolia University,23-28 (ISTP BJ54P)
●专著与教材
1.蔡禄,生物信息学(41万字),2006年,北京,化学工业出版社
2.陈铭主编蔡禄参编(8万字),生物信息学,2012年,北京,科学出版社
3.蔡禄主编,表观遗传学前沿(50万字),2012年,北京,清华大学出版社