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个人简介

2014年至今,上海大学生命学院,研究员,博士生导师 2009年-2014年,上海大学系统生物技术研究所,研究员,博士生导师 2007年-2009年,中国科学院,生命科学院计算生物学研究所,课题组长(PI),研究员,博士生导师 1998年-2007年,英国罗斯林研究所、威尔斯大学,曼彻斯特大学,研究助理 1996年-1998年,欧洲分子生物学实验室(EMBL),博士后 1995年-1996年,美国斯坦福大学(Stanford Univ.),访问学者 1990年-1995年,中国科学院,上海微系统研究所和中科院上海生物工程研究中心,助理研究员,副研究员

研究领域

从事生物信息学研究

近期论文

查看导师新发文章 (温馨提示:请注意重名现象,建议点开原文通过作者单位确认)

1. *Cai YD, Zhang Q, Zhang YH, Chen L, Huang T. Identification of Genes Associated with Breast Cancer Metastasis to Bone on a Protein−Protein Interaction Network with a Shortest Path Algorithm. Journal of Proteome Research 2017 Feb 3; 16(2): 1027-1038. 2. Chen L, Huang T, Zhang YH, *Jiang Y, *Zheng MY, *Cai YD. Identification of novel candidate drivers connecting different dysfunctional levels for lung adenocarcinoma using protein-protein interactions and a shortest path approach. Scientific Reports 2016; 6:29849. 3. Huang T, Li BQ, *Cai YD. The Integrative Network of Gene Expression, MicroRNA, Methylation and Copy Number Variation in Colon and Rectal Cancer. Current Bioinformatics 2016, 11. 4. Li BQ, Huang GH, Huang T, Feng, KY, Liu L,*Cai YD. Prediction of Colorectal Cancer Related Genes Based on Gene Ontology. Current Bioinformatics 2015, 10(1), 22-30. 5. Zhang PW, Chen L, Huang T, Zhang N, *Kong XY, *Cai Y D. Classifying ten types of major cancers based on reverse phase protein array profiles. PloS one 2015, 10(3), e0123147. 6. Huang T, Yang J, *Cai YD. Novel Candidate Key Drivers in the Integrative Network of Genes, MicroRNAs, Methylations, and Copy Number Variations in Squamous Cell Lung Carcinoma. BioMed Research International 2015. 7. Yang J, Chen L, *Kong X, Huang T, *Cai YD: Analysis of Tumor Suppressor Genes Based on Gene Ontology and the KEGG Pathway. PloS one 2014, 9(9):e107202. 8. Li BQ, You J, *Huang T, *Cai YD: Classification of non-small cell lung cancer based on copy number alterations. PloS one 2014, 9(2):e88300. 9. Jiang M, Chen Y, Zhang Y, Chen L, Zhang N, Huang T, *Cai, YD, *Kong XY: Identification of hepatocellular carcinoma related genes with k-th shortest paths in a protein-protein interaction network. Molecular BioSystems 2013, 9(11): 2720-2728. 10. Li BQ, You J, Chen L, Zhang J, Zhang N, Li HP, Huang T, Kong XY*, *Cai, YD. Identification of Lung-Cancer-Related Genes with the Shortest Path Approach in a Protein-Protein Interaction Network. Biomed Research International 2013, 2013: 267375. 11. Jiang Y, Huang T, Chen L, *Gao, YF, *Cai YD, Chou KC. Signal propagation in protein interaction network during colorectal cancer progression. Biomed Research International 2013, 2013: 287019. 12. Huang T, *Cai YD. An information-theoretic machine learning approach to expression QTL analysis. PLos One 2013, 8(6): e67899. 13. Huang T, Jiang M, *Kong XY, *Cai YD. Dysfunctions Associated with Methylation, MicroRNA Expression and Gene Expression in Lung Cancer.PLos One 2012, 7(8): e43441. 14. Li BQ, Zhang J, Huang T, Zhang L, *Cai YD. Identification of retinoblastoma related genes with shortest path in a protein-protein interaction network. Biochimie 2012, 94(9): 1910-1917. 15. Li BQ, Huang T, *Liu L, *Cai YD, Chou KC. Identification of colorectal cancer related genes with mRMR and shortest path in protein-protein interaction network. PLos One 2012, 7(4): e33393. 16. *Cai YD, Huang T, Feng KY, Hu L, Xie L. A Unified 35-Gene Signature for both Subtype Classification and Survival Prediction in Diffuse Large B-Cell Lymphomas. PLos One 2010, 5(9): e12726.

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