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个人简介

教育经历 2002.92006.12 中国科学技术大学细胞生物学博士学位研究生(博士)毕业 2000.92003.7 中国科学技术大学计算机科学与技术学士学位双学士学位 1998.92002.7 中国科学技术大学高分子科学与工程学士学位本科(学士) 工作经历 2009.7至今 华中科技大学生命科学与技术学院教授 2007.72009.7 中国科学技术大学生命科学学院系统生物学系副教授 2007.12007.7 中国科学技术大学生命科学学院研究助理

研究领域

生物信息学、蛋白质科学、细胞自噬、磷酸化、深度学习

近期论文

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Wang C, Shui K, Ma S, Lin S, Zhang Y, Wen B, Deng W, Xu H, Hu H, Guo A, Xue Y#, Zhang L#.Integrated omics in Drosophila uncover a circadian kinome. Ruan C, Wang C, Gong X, Zhang Y, Deng W, Zhou J, Huang D, Wang Z, Zhang Q, Guo A, Lu J, Gao J#, Peng D#, Xue Y#.An integrative multi-omics approach uncovers the regulatory role of CDK7 and CDK4 in autophagy activation induced by silica nanoparticles. Deng W, Ma L, Zhang Y, Zhou J, Wang Y, Liu Z, Xue Y#.THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy. Guo Y, Peng D, Zhou J, Lin S, Wang C, Ning W, Xu H, Deng W#, Xue Y#.iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domains. Ning W, Guo Y, Lin S, Mei B, Wu Y, Jiang P, Tan X, Zhang W, Chen G, Peng D, Chu L#, Xue Y#.DrLLPS: a data resource of liquid-liquid phase separation in eukaryotes. Zhang Y, Xie Y, Liu W, Deng W, Peng D, Wang C, Xu H, Ruan C, Deng Y, Guo Y, Lu C, Yi C, Ren J#, Xue Y#.DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae. Lin S, Wang C, Zhou J, Shi Y, Ruan C, Tu Y, Yao L, Peng D, Xue Y#.EPSD: a well-annotated data resource of protein phosphorylation sites in eukaryotes. Ning W, Lin S, Zhou J, Guo Y, Zhang Y, Peng D, Deng W#, Xue Y#.WocEA: The visualization of functional enrichment results in word clouds. Zhou J, Xu Y, Lin S, Guo Y, Deng W, Zhang Y, Guo A, Xue Y#.iUUCD 2.0: an update with rich annotations for ubiquitin and ubiquitin-like conjugations. Xu Y, Zhang S, Lin S, Guo Y, Deng W, Zhang Y, Xue Y#.WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes.

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