个人简介
2012年毕业于中国科学技术大学生命科学学院,获得博士学位。2012年至2015年在微尺度物质科学国家实验室从事博士后研究。博士后期间获得中国博士后科学基金二等资助和自然科学青年基金资助,参加国家重大研究计划一项。2015年任中国科学技术大学生命科学学院特任副研究员,获得中央高校基本科研业务费专项资金资助。研究成果发表于Nucleic Acids Res、 Bioinformatics、Database等期刊。
研究领域
1、 高通量测序数据分析平台的开发2、 非编码RNA的计算生物学研究3、 致病突变遗传筛选平台的开发
近期论文
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1. Zhang Y#, Zang Q#, Zhang H#, Ban R, Yang Y, Iqbal F, Li A*, Shi Q*. DeAnnIso: a tool for online detection and annotation of isomiRs from small RNA sequencing data. Nucleic Acids Res. 2016 May 13; 10.1093/nar/gkw427. 2. Zhang Y#, Zang Q#, Xu B#, Zheng W#, Ban R, Zhang H, Yang Y, Hao Q, Iqbal F, Li A*, Shi Q*. IsomiR Bank: a research resource for tracking IsomiRs. Bioinformatics. 2016 Mar: 10.1093/bioinformatics/btw070. 3. Zhang Y#, Yu Z#, Ban R#, Zhang H#, Iqbal F, Zhao A, Li A*, Shi Q*. DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data. Nucleic Acids Res. 2015 Jul 1;43(W1):W289-94. 4. Hua J#, Xu B#, Yang Y, Ban R, Iqbal F, Cooke HJ, Zhang Y*, Shi Q*. Follicle Online: an integrated database of follicle assembly, development and ovulation. Database (Oxford). 2015 Apr 29;2015:bav036. 5. Xu B#, Zhang Y#, Tong X, Liu, Y*. Characterization of microRNA profile in human cumulus granulosa cells: Identification of microRNAs that regulate Notch signaling and are associated with PCOS. Mol Cell Endocrinol, 2015 Mar 15;404:26-36. doi: 10.1016/j.mce. 6. Yang Q#, Hua J#, Wang L, Xu B, Zhang H, Ye N, Zhang Z, Yu D, Cooke HJ, Zhang Y*, Shi Q*. MicroRNA and piRNA profiles in normal human testis detected by next generation sequencing. PLoS One. 2013 Jun 24;8(6):e66809. 7. Zhang Y#, Zhong L#, Xu B#, Yang Y#, Ban R, Zhu J, Cooke HJ, Hao Q, Shi Q*. SpermatogenesisOnline 1.0: a resource for spermatogenesis based on manual literature curation and genome-wide data mining. Nucleic Acids Res. 2013 Jan;41(Database issue):D1055-62. 8. Zhang Y#, Xu B#, Yang Y, Ban R, Zhang H, Jiang X, Cooke HJ, Xue Y*, Shi Q*. CPSS: a computational platform for the analysis of small RNA deep sequencing data. Bioinformatics. 2012 Jul 15;28(14):1925-7. 9. Zhang Y#, Yang Y#, Zhang H#, Jiang X#, Xu B, Xue Y, Cao Y, Zhai Q, Zhai Y, Xu M, Cooke HJ, Shi Q*. Prediction of novel pre-microRNAs with high accuracy through boosting and SVM. Bioinformatics. 2011 May 15;27(10):1436-7.