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Ma, J., and Ptashne, M. (1987). Deletion analysis of GAL4 defines two transcriptional activating segments. Cell 48, 847-853. PMID: 3028647
Ma, J., and Ptashne, M. (1987). The carboxy terminal 30 amino acids of GAL4 are recognized by GAL80. Cell 50, 137-142. PMID: 3297349
Ma, J., and Ptashne, M. (1987). A new class of yeast transcriptional activators. Cell 51, 113-119. PMID: 3115591
Ruden, D., Ma, J., and Ptashne, M. (1988). No strict alignment is required between a transcriptional activator binding site and the "TATA box" of a yeast gene. Proc. Natl. Acad. Sci. USA 85, 4262-4266. PMID: 3132708; PMCID: PMC280407
Ma, J., Przibilla, E., Hu, J., Bogorad, L., and Ptashne, M. (1988). Yeast activators stimulate plant gene expression. Nature 334, 631-633. PMID: 3165494
Sadowski, I., Ma, J., Triezenberg, S., and Ptashne, M. (1988). GAL4-VP16 is an unusually potent transcriptional activator. Nature 335, 563-564. PMID: 3047590
Ma, J., and Ptashne, M. (1988). Converting a eukaryotic transcriptional inhibitor into an activator. Cell 55, 443-446. PMID: 3180218
Driever, W., Ma, J., Nusslein-Volhard, C., and Ptashne, M. (1989). Rescue of bicoid mutant Drosophila embryos by Bicoid fusion proteins containing heterologous activating sequences. Nature 342, 149-154. PMID: 2509940
Ruden, D., Ma, J., Li, Y., Wood, K., and Ptashne, M. (1991). Generating yeast transcriptional activators containing no yeast protein sequences. Nature 350, 250-252. PMID: 2005981
Dasmahapatra, B., DiDomenico, B., Dwyer, S., Ma, J., Sadowski, I., and Schwartz, J. (1992). A novel genetic system to study a proteolytic enzyme. Proc. Natl. Acad. Sci. USA 89, 4159-4162. PMID: 1570342; PMCID: PMC525652
Ma, J. (1992). Detecting interactions between eukaryotic proteins in bacteria. Gene Expression 2, 139-146. PMID: 1633437
Lehming, N., Thanos, D., Brickman, J., Ma, J., Maniatis, M., and Ptashne, M. (1994). A HMG-like protein that can switch a transcriptional activator to a repressor. Nature 371, 175-179. PMID: 8072548
Ma, X., Yuan, D., Diepold, K., Scarborough, T., and Ma, J. (1996). The Drosophila morphogenetic protein Bicoid binds DNA cooperatively. Development 122, 1195-1206. PMID: 8620846
Shaw, S. P., Wingfield, J., Dorsey, M. J., and Ma, J. (1996). Identifying a species-specific region of yeast TFIIB in vivo. Molecular and Cellular Biology 16, 3651-3657. PMID: 8668181; PMCID: PMC231360
Yuan, D., Ma, X., and Ma, J. (1996). Sequences outside the homeodomain of Bicoid are required for protein-protein interaction. J. Biol. Chem. 271, 21660-21665. PMID: 8702955
Shaw, S. P., Carson, D. J., Dorsey, M. J., and Ma, J. (1997). Mutational studies of yeast TFIIB in vivo reveal a functional surface important for gene activation. Proc. Natl. Acad. Sci. USA 94, 2427-2432. PMID: 9122211; PMCID: PMC20104
Ma, X., Yuan, D., Scarborough, T., and Ma, J. (1999). Contribution to gene activation by multiple functions of Bicoid. Biochem. J. 338, 447-455. PMID: 10024522; PMCID: PMC1220072
Yuan, D., Ma, X., and Ma, J. (1999). Recognition of multiple patterns of DNA sites by the Drosophila homeodomain protein Bicoid. J. Biochem. 125, 809-817. PMID: 10101296
Zhang, D., Dorsey, M. J., Voth, W. P., Carson, D. J., Zeng, X., Stillman, D. J., and Ma, J. (2000). Intramolecular interaction of yeast TFIIB in transcriptional Control. Nucl. Acids Res. 28, 1913-1920. PMID: 10756191; PMCID: PMC103289
Dave, V., Zhao, C., Yang, F., Tung, C.-S., and Ma, J. (2000). Reprogrammable recognition codes in Bicoid homeodomain-DNA interaction. Mol. Cell. Biol. 20, 7673-7684. PMID: 11003663; PMCID: PMC86337
Zhao, C., Dave, V., Yang, F. Scarborough, T., and Ma, J. (2000). Target selectivity of Bicoid is dependent on non-consensus site recognition and protein-protein interaction. Mol. Cell. Biol. 20, 8112-8123. PMID: 11027281; PMCID: PMC86421
Zhao, C., York, A., Yang, F., Forsthoefel, D. J., Dave, V., Fu, D., Zhang, D., Corado, M. S., Small, S., Seeger, M. A., and Ma, J. (2002). The activity of the Drosophila morphogenetic protein Bicoid is inhibited by a domain located outside its homeodomain. Development 129, 1669-1680. PMID: 11923203
Zhang, D., Carson, D. J., and Ma, J. (2002). The role of TFIIB-RNA polymerase II interaction in start site selection in yeast cells. Nucl. Acids Res. 30, 3078-3085. PMID: 12136090; PMCID: PMC135743