Bai, Yongsheng - Indiana State University

研究领域

Next-Generation Sequencing Pipeline Algorithm Development; Statistical Model Development; Comparative “Omics”; Genetics of Disease; Evolutionary Genomics; Development of Food Antimicrobials.

近期论文

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J.P. Simmer, A.S. Richardson, S. Wang, B.M. Reid, Y. Bai, Y. Hu, Y. Zhang, N. Mackman, J. C-C. Hu. 2014. “Ameloblast Transcriptome Changes from Secretory to Maturation Stages”. Connective Tissue Res. 2014 Aug;55 Suppl 1:29-32. doi:10.3109/03008207.2014.923862 Bai, Y., J. Hassler, A. Ziyar, P. Li, Z. Wright, R. Menon, G.S. Omenn, J.D. Cavalcoli, R.J. Kaufman, M.A. Sartor. 2014. “Novel bioinformatics methods for identification of genome-wide non-canonical spiced regions using RNA-Seq data”. PLoS ONE 9(7): e100864. doi:10.1371/journal.pone.0100864. Bai, Y.* & J. Cavalcoli. 2013. “SNPAAMapper: An efficient genome-wide SNP variant analysis pipeline for next-generation sequencing data”. Bioinformation 9(17). 870-872. X. Chen, H. Wang, K. Bajaj, P. Zhang, Z. Meng, D. Ma, Y. Bai, E. Adams, A. Baines, G. Yu, M.A. Sartor, B. Zhang, Z. Yi, J. Lin, S. Young, R. Schekman, and D. Ginsburg. 2013. “SEC24A Deficiency Lowers Plasma Cholesterol through Reduced PCSK9 Secretion”. eLife. 2:e00444. Bai, Y.*, M. Sartor, and J. Cavalcoli. 2012. “Current Status and Future Perspectives for Sequencing Livestock Genomes” (Review). Journal of Animal Science and Biotechnology. 3:8. J.K. Bedoyan, V.M. Schaibley, W. Peng, Y. Bai, K. Mondal, A.C. Shetty, M. Durham, J.A. Micucci, A. Dhiraaj, J.M. Skidmore, J.B. Kaplan, C. Skinner, C.E. Schwartz, A. Antonellis, M.E. Zwick, J.D. Cavalcoli, J.Z. Li, D.M. Martin. 2012. “Disruption of RAB40AL function leads to MartineProbst syndrome, a rare X-linked multisystem neurodevelopmental human disorder”. Journal of Med Genet. 49:332-340. Bai, Y., C. Casola, and E. Betrán. 2009. “Quality of regulatory elements in Drosophila retrogenes”. Genomics 93(1):83-89. Bai, Y., C. Casola, and E. Betrán. 2008. “Evolutionary origin of regulatory regions in Drosophila”. BMC Genomics 9(1):241. Bai, Y., C. Casola, C. Feschotte, and E. Betrán. 2007. “Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila”. Genome Biology 8(1):R11. Bai, Y., K. R. Coleman, C. W. Coleman and A. L. Waldroup. 2007. “Effect of Cetylpyridinium Chloride (Cecure? CPC Antimicrobial) on the Refrigerated Shelf Life of Fresh Boneless, Skinless Broiler Thigh Meat”. International Journal of Poultry Science, 6(2):91-94. Betrán, E., Y. Bai, and M. Motiwale. 2006. “Fast protein evolution and germline expression of a Drosophila parental gene and its young retroposed paralog”. Molecular Biology and Evolution, 23(11):2191-2202. Bai, Y. and B. P. Weems. 2006. “Another Algorithms for Computing Longest Common Increasing Subsequence for Two Random Input Sequences”. Proceedings of the 2006 International Conference on Foundations of Computer Science, pp. 81-87. Bai, Y. and E. Betrán. 2005. “Ovary-biased, Testis-biased, and Soma-biased Paralogs in the Drosophila melanogaster Genome”. The 2nd Biotechnology and Bioinformatics Symposium (BIOT), pp. 75-78. Bai, Y and B. P. Weems. 2005. “The Longest Common Increasing Subsequence Problem”. Proc. of the 8th Joint Conference on Information Sciences, pp. 362-366. Bai, Y. and B. P. Weems. 2005. “Finding Longest Common Increasing Subsequence for Two Different Scenarios of Non-random Input Sequences”. Proc. of the 2005 International Conference on Foundations of Computer Science, pp. 64-70.