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26. Vázquez-Miranda, H.*, Perez-Moreno, J.*, Bracken-Grissom, H. In Review. A reference guide to RNA profile diversity across Arthropoda: Expected outcomes, helpful hints, and methodological artifacts during RNA extraction. Molecular Ecology Resources. 24 pages. IF=3.98
25. Voolstra, C., Worheide, G., Lopez, J., Bracken-Grissom, H.D., et al. Accepted. Leveraging the Power of Community Cooperation to Advance Invertebrate Genomics-Updates from the GIGA consortium. Invertebrate Systematics. IF=2.264
24. Bracken-Grissom, H. and Wolfe, J. Accepted/Invited. The Pancrustacean Conundrum: A Conflicted Phylogeny with Emphasis on Crustacea. In: The Natural History of the Crustacea. 26 pages.
23. Chien-Lin, C., Goy, J.W., Bracken-Grissom, H.D., Felder, D.L., Tsang, M.L., Chan, T.Y. In Press. Phylogeny of Stenopodidea (Crustacea: Decapoda) shrimps inferred from nuclear and mitochondrial genes reveals non-monophyly of the families Spongicolidae and Stenopididae, and most of their composite genera. Invertebrate Systematics. 30, 479-490. http://dx.doi.org/10.1071/IS16024 IF=2.264.
22. Robalino, J., Wilkins, B.*, Bracken-Grissom, H., Chan, T-Y., O’Leary, M. 2016. The Origin of Large-bodied shrimp that dominate modern global aquaculture. PLOS ONE. 11(7): e0158840. doi:10.1371/journal.pone.0158840. IF= 3.23.
21. Perez-Moreno, J.L., Iliffe, T.M., Bracken-Grissom, H.D. 2016. Life in the Underworld: Anchialine cave biology in the era of speleogenomics. International Journal of Speleology. 45(2), 149-170. IF= 1.656
20. Timm, L.* and Bracken-Grissom, H. 2015. The forest for the trees: evaluating molecular phylogenies with an emphasis on higher-level Decapoda Latreille, 1802. Journal of Crustacean Biology. 35(5), 577-592. IF =1.187.
19. Wong, J., Perez-Moreno, J.L., Chan, T.Y., Frank, T., Bracken-Grissom, H.D. 2015. Phylogenetic and transcriptomic analyses reveal the evolution of bioluminescence and light detection in marine deep-sea shrimps of the family Oplophoridae (Crustacea: Decapoda). Molecular Phylogenetics and Evolution. 83: 278-292. IF=4.65
18. Owen, C., Bracken-Grissom, H.D., Stern, D., Crandall, K.A. 2015. The synthetic phylogeny of freshwater crayfish: Insights for conservation. Philosophical Transactions of the Royal Society of Biological Sciences. IF= 6.23
17. Bracken-Grissom, H.D. and D.L. Felder. 2014. Taxonomic revisions of the American snapping shrimp allied to Alpheus floridanus (Crustacea: Decapoda: Alpheidae). 3895 (4): 451-491. Zootaxa. IF=1.06.
16. Bracken-Grissom, H.D., R. Robles and D.L. Felder. 2014. Molecular phylogenetics of snapping shrimp allied to Alpheus floridanus (Crustacea: Decapoda: Alpheidae). 3895 (4): 492-502. Zootaxa. IF=1.06.
15. Poore, G.B., Ahyong, S., Bracken-Grissom, H.D., Chan, T.Y., Chu, K.H., Crandall, K.A., Dworschak, P.C., Felder, D.L., Feldman, R.M., Hynzy, M., Lemaitre, R., Karasawa, H., Komai, T., Li, X., Mantelatto, F., Martin, J., Robles, R., Schweitzer, C.E., Tamaki, A., Tsang, M., Tudge, C. 2014. On stabilising the names of the infrorders of thalassinidean shrimps, Axiidea and Gebiidea. Crustaceana. 87 (10) 1258-1272. IF= 0.46
14. Speiser, D.I., Pankey, S., Zaharoff, A.K., Battelle, B.A., Bracken-Grissom, H.D., Brienholt, J.W., Bybee, S.M., Cronin, T.W., Garm, A., Patel, N.H., Porter, M.L., Protas, M.E., Rivera, A.S., Serb, J.M., Zigler, K.S., Crandall, K.A., Oakley, T.H. 2014. Using Phylogenetically Informed Annotation (PIA) to search for light interacting genes in transcriptomes from non-model organisms. BMC Bioinformatics. 15 (350): 1-12. http://www.biomedcentral.com/1471-2105/15/350. IF= 3.02.
13. Felder, D.L., Thoma, B., Schmidt, W., Sauvage, F., Self-Kreyesky, S., Bracken-Grissom, H.D., Fredericq, S. 2014. Monitored Seaweeds and Decapod Crustaceans on Northwestern Gulf Deep Banks Following the Deepwater Horizon Oil Spill. Bioscience. 64(9): 808-819. IF= 4.739
12. Bracken-Grissom, H.D., S. Ahyong, R. Wilkinson, Z. Yang, J. Brienholt, F. Palero, T-Y. Chan, M. Bendall*, R. Feldmann, C. Schweitzer, K.H. Chu, D.L. Felder, R. Robles, D. Kim*, M. Tsang, J. Martin, and K.A. Crandall. 2014. Emergence of the Lobsters: Phylogenetic Relationships, Morphological Evolution and Divergence Time Comparisons of a Fossil Rich Group (Achelata, Astacidea, Glypheidea, Polychelida). Systematic Biology. 63(4): 457-479. 5-yr IF= 13.316
11. GIGA Community of Scientists. 2014. The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes. Journal of Heredity. 105(1): 1-18.
10. Bracken-Grissom, H.D., M.E. Cannon, P. Cabezas, R.M. Feldmann, C.E. Schweitzer, S.T. Ahyong, D.L. Felder, R. Lemaitre and K.A. Crandall. 2013. A comprehensive and integrative reconstruction of evolutionary history for Anomura (Crustacea: Decapoda). BMC Evolutionary Biology. 13:128.
9. Bracken-Grissom, H.D., Felder, D.L., Volmer, N., Martin, J. and K.A. Crandall. 2012. Phylogenetics Links Monster Larva to Deep-Sea Shrimp. Ecology and Evolution, 2(10): 2367-2373.
8. Bracken-Grissom, H.D., Yang, C.H.^, D. Kim*, K.A. Crandall and T-Y. Chan. 2012. Phylogenetic Relationships, Character Evolution, and Taxonomic Implications within the Slipper Lobsters (Crustacea: Decapoda: Scyllaridae). Molecular Phylogenetics and Evolution. 62, 237-250. ^ Co-first author.
7. Bybee, S.M., H.D. Bracken-Grissom, B. Haynes*, R. Hermansen*, R. Byers, M. Clement, J. Udall and K.A. Crandall. 2011. A scalable next-gen approach to multilocus, multitaxa phylogenetics: An example of directed sequencing using Pancrustacea. Genome Biology and Evolution. 3, 1312–1323.
6. Bracken-Grissom, H.D., T. Enders*, C. Jara, and K. Crandall. 2011. Molecular diversity of two freshwater anomuran crab species in Southern Chile (Decapoda: Anomura: Aeglidae) compared to associated morphometric differences. In: C. HELD, C. SCHUBART, S. KOENEMANN (eds.). Phylogeography and population genetics in Crustacea (Crustacean Issues 19), Taylor and Francis/CRC Press, Bocan Raton. 305-322.
5. Bybee, S.M., H.D. Bracken-Grissom, R. Hermansen*, D.L. Felder and K.A. Crandall. 2011. Directed next generation sequencing for phylogenetics: An example using Decapoda. Zoologischer Anzeiger. 250, 497-506.
4. Bracken, H.D., S. De Grave, A. Toon, D.L. Felder, and K.A. Crandall. 2010. The Phylogenetic Position, Taxonomic Status, and Divergence Time of the Procarididea (Crustacea: Decapoda). Felgenhauer & Abele, 1983. Zoologica Scripta 39 (2) 198-212.
3. Felder, D. L., P. C. Dworschak, R. Robles, H. D. Bracken, A. M. Windsor, J. M. Felder, and R. Lemaitre. 2009. Obvious Invaders and Overlooked Infauna: Unexpected Constituents and New Discoveries of the Decapod Crustacean Assemblage at Twin Cays, Belize. Smithsonian Contributions to Marine Sciences 38, 181-188.
2. Bracken, H.D., A. Toon, D. Felder, J. Martin, M. Finley, J. Rasmussen*, F. Palero, and K.A. Crandall. 2009. The Decapod Tree of Life: Compiling the data and moving toward a consensus of decapod evolution. Arthropod Phylogenetics and Systematics 67 (1) 99-116.