MCGINNIS, KAREN M. - Florida State University

个人简介

Ph.D., Arizona State University, 2000

近期论文

查看导师新发文章（温馨提示：请注意重名现象，建议点开原文通过作者单位确认）

Li, Q., J. I. Gent, G. Zynda, J. Song, I. Makarevitch, C. D. Hirsch, C. N. Hirsch, R. K. Dawe, T. Madzima, K. M. McGinnis, D. Lisch, R. J. Schmitz, M. W. Vaughn, and N. M. Springer (2015) RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome. Proceedings of the National Academy of Sciences of the United States of America 112: 14728-14733. (Full text) (PDF) Li, Q., S. R. Eichten, P. J. Hermanson, V. Zaunbrecher, J. Song, J. Wendt, H. Rosenbaum, T. F. Madzima, A. E. Sloan, J. Huang, D. Burgess, T. Richmond, S. M. Kaeppler, K. M. McGinnis, R. Meeley, O. Danilevskaya, M. W. Vaughn, J. Jeddeloh, and N. M. Springer (2014) Genetic Perturbation of the Maize Methylome. The Plant Cell 26: 4602-4616. (Full text) (PDF) Sloan, A. E., L. Sidorenko, and K. M. McGinnis (2014) Diverse Gene Silencing Mechanisms with Distinct Requirements for RNA Polymerase Subunits in Zea mays. Genetics 198: . (Full text online) (PDF online) Gent, J. I., T. F. Madzima, R. Bader, M. R. Kent, X. Zhang, M. Stam, K. M. McGinnis, and R. K. Dawe (2014) Accessible DNA and relative depletion of H3K9me2 at maize RdDM loci. The Plant Cell . (available online) Haag, J. R., B. Brower-Toland, , E. K. Krieger, L. Sidorenko, C. D. Nicora, A. Norbeck, A. Irsigler, H. LaRue, J. Brzeski, K. McGinnis, S. Ivashuta, L. Pasa-Tolic, V. L. Chandler, and C. S. Pikaard (2014) Functional Diversification of Maize RNA Polymerase IV and V Subtypes via Alternative Catalytic Subunits. Cell Reports 9: 378-390. (PDF online) Madzima, T., J. Huang, and K. M. McGinnis (2014) Chromatin structure and gene expression changes associated with loss of MOP1 activity in Zea mays. Epigenetics 9: 1047-1059. (Available online) Madzima, T. F., A. E. Sloan, L. Stroud, and K. M. McGinnis 2014 Chapter 9: Epigenomics In Genetics, Genomics and Breeding of Maize (Available from CRC Press) Vera, D. L., J. Labonne, P. Alam, T. Madzima, G. G. Hoffman, S. B. Gigimurugan, J. Zhang, K. M. McGinnis, J. H. Dennis, and H. W. Bass, (2014) Differential nuclease sensitivity profiling of chromatin reveals biochemical footprints coupled to gene expression and functional DNA elements in maize. Plant Cell In press: . (Available online) Fincher, J., D. Vera, D. D. Hughes, K. M. McGinnis, J. H. Dennis, and H. W. Bass (2013) Genome-wide prediction of nucleosome occupancy in maize (Zea mays L.) reveals plant chromatin structural features at genes and other elements at multiple scales. Plant Physiology 162: 1127-41. (Available online) Labonne, J. D., J. E. Dorweiler, and K. M. McGinnis (2013) Changes in nucleosome position at transcriptional start sites of specific genes in Zea mays mediator of paramutation1 mutants. Epigenetics 8: 398-408. (Available online) Boerner, S. L., and K. M. McGinnis (2012) Computational Identification and Functional Predictions of Long Noncoding RNA in Zea mays. PLoS One 7: e43047. (Available online) Eichten, S. E., N. A. Ellis, I. Makarevitsch, C. Yeh, J. I. Gent, L. Guo, K. M. McGinnis, X. Zhang, P. S. Schnable, M. W. Vaughn, R. K. Dawe, and N. M. Springer (2012) Spreading of heterochromatin is limited to specific families of maize retrotransposons. PLoS Genetics 8: e1003127. (Available online) Irsigler, A., and K. M. McGinnis 2011 Genetic resources for the study of epigenetic gene regulation in maize. In Epigenetics: A resource manual Jeff Craig and Nick Wong Horizon Press 409-420 Madzima, T. F., E. S. Mills, J. M. Gardiner, and K. M. McGinnis (2011) Identification of epigenetic regulators of a transcriptionally silenced transgene in maize. G3: Genes, Genomes, Genetics 1: 75-83. McGinnis, K. M. (2010) RNAi for plant functional genomics. Briefings in Functional Genomics and Proteomics doi:10.1093/bfgp/elp052: . McGinnis, K. M. 2009 Use of transgene induced RNAi to regulate endogenous gene expression. In Methods in Molecular Biology M. Paul Scott Humana Press 91-99 Barbazuk, W. B., Y. Fu, and K. M. McGinnis (2008) Genome-wide analyses of alternative splicings in plants: opportunities and challenges.. Genome Research 18: 1381-1392. Notice: Uninitialized string offset: 0 in /usr/local/www/apache24/data/faculty.php on line 51Bowler, C. A., and et al. (2008) The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456: 239-244. McGinnis, K. M., N. Murphy, A. Carlson, A. Akula, C. Akula, H. Basinger, M. Carlson, P. Hermanson, N. Kovacevic, M. McGill, V. Seshadri, J. Yoyokie, K. Cone, H. F. Kaeppler, S. M. Kaeppler, and N. M. Springer (2007) Assessing the efficiency of RNA interference for maize functional genomics. Plant Physiology 143: 1441-1451. Alleman, M. A., L. Sidorenko, K. McGinnis, J. White, V. Seshadri, J. Dorweiler, K. Sikkink, and V. Chandler (2006) An RNA-dependent RNA polymerase is required for paramutation in maize. Nature 442: 295-298. McGinnis, K. M., C. Springer, Y. Lin, C. C. Carey, and V. L. Chandler (2006) Transcriptionally silenced transgenes in maize are activated by three mutations defective in paramutation. Genetics 173: 1637-1647.