Borer, Philip N. - Syracuse University - Department of Chemistry

研究领域

Biochemistry; nucleic acid structure and interaction, biosensors, nuclear magnetic resonance

近期论文

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Wang, S., Pelczer, I., Borer, P. N., & Levy, G. C. (1994) J. Magn. Reson. Ser. A 108, 171-176, “Maximum-Likelihood Deconvolution of NMR Spectra in Multidimensional Space.” Wang, K.- Y., Zhang, Y. -J, & Borer, P. N. (1994) Science in China Ser. B 37, 1177-1184, “NMR Studies on Structural Features of DNA [d(TCGCGCG)]2 with a Dangling T Residue.” Xu, J., Weber, P., & Borer, P. N. (1995) J. Biomolec. NMR 5, 183-192; “Computer-assisted As-signment of Peptides with Non-standard Amino Acids.” Borer, P. N., Lin, Y., Wang, S., Roggenbuck, M. J., Gott, J. M., Uhlenbeck, O. C., & Pelczer, I. (1995) Biochemistry 34, 6488-6503; “Proton NMR and Structural Features of a 24-nucleotide RNA Hairpin Loop.” Yu, J. -Q., Blumenthal, D. S., & Borer, P. N. (1995) J. Chem. Info. & Comput. Sci. 35, 803-805; “Monte Carlo Estimation of Errors in 13C-NMR Relaxation Studies of a DNA Oligomer Duplex.” Bishop, K. D., Borer, P. N., & Pelczer, I. (1996) J. Magn. Reson., Ser B 110, 9-15; “Improved Proton Assignment for DNA by Application of Aliasing and Dispersive-Absorptive Phasing to Two-Quantum COSY Spectra.” Kerwood, D. J., & Borer, P. N. (1996) Magn. Reson. Chem. 34, S136-S146; “Structure Refine-ment for a 24-Nucleotide RNA Hairpin.” De Guzman, R. N., Wu, Z. R., Stalling, C., Pappalardo, L., Borer, P. N., & Summers, M. F. (1998) Science 279, 384-388; “Structure of the HIV-1 Nucleocapsid Protein bound to the SL3 -RNA Recognition Element.” Nooren, I. M. A., Wang, K. -Y., Borer, P. N., & Pelczer, I. (1998) J. Biomolec. NMR 11, 319-328; “Full 1H-NMR Assignment of a 24-nucleotide RNA Hairpin: Application of the 1H 3D-NOE/2QC Experiment.” Pappalardo, L., Kerwood, D. J., Pelczer, I., & Borer, P. N. (1998) J. Molec. Biol 282, 801-818; “Three Dimensional Folding of an RNA Hairpin Required for Packaging HIV-1.” Hayes, M. P., Hatala, P. J., Sherer, B. A., Tong, X., Zanatta, N., Borer, P. N., & Kallmerten, J. (2001) Tetrahedron 57, 1515-1524; “Regioselective Synthesis of 13C1-labeled 2-deoxyribonolac-tones.” LaPlante, S. R. & Borer, P. N. (2001) Biophys. Chem. 90, 219-232; “Changes in 13C NMR Chemical Shifts of DNA as a Tool for Monitoring Drug Interactions.” Kerwood, D. J., Cavaluzzi, M. J., & Borer, P. N. (2001) Biochemistry 40, 14518-14529; “Struc-ture of SL4 RNA from the HIV-1 Packaging Signal.” Hatala, P. J., Kallmerten, J., & Borer, P. N. (2001) Nucleosides, Nucleotides & Nucleic Acids 20, 1961-1973; “Regioselective Synthesis of 1,3,5-13C3- and 2,4-13C2-labeled 2-deoxyribonolac-tones.” Shubsda, M. F., Paoletti, A. C., Hudson, B.S., & Borer, P. N. (2002) Biochemistry 41, 5276-5282; “Affinities of Packaging Domain Loops in HIV-1 RNA for the Nucleocapsid Protein.” Cavaluzzi, M. J., Kerwood, D. J., & Borer, P. N. (2002) Analyt. Biochem. 308, 373-380; “Accu-rate Concentration Measurements for Biomolecules by NMR.” Paoletti, A. C., Shubsda, M. F., Hudson, B. S., & Borer, P. N. (2002) Biochemistry 41, 15423-15428; “Affinities of the nucleocapsid protein for variants of SL3 RNA in HIV-1.” Yuan, Y.-Q. Kerwood, D. J., Paoletti, A. C., Shubsda, & Borer, P. N. (2003) Biochemistry 42, 5259-5269; “The Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1 3 Internal Loop.” Cavaluzzi, M. J. & Borer, P. N. (2004) Nucleic Acids Res. 32, e13 1-9; “Revised UV Extinction Coefficients for Nucleoside 5'-Monophosphates and unpaired DNA and RNA.” Boudreau, E.A., Pelczer, I., Borer, P.N., Heffron, G.J., & LaPlante, S.R. (2004), Biophysical Chem. 109, 333-344; “Changes in Drug 13C NMR Chemical Shifts as a Tool for Monitoring In-teractions with DNA.” Paoletti, A. C., Yule, R., Lin, Y., Shubsda, M. F., Hudson, B. S., & Borer, P. N. (2005, in preparation) J. Med. Chem; “Issues in Nucleocapsid-Targeted Drug Discovery and Design.”