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Yao, T. (2015) “A Timer to Coordinate Substrate Processing by the 26S Proteasome.” Nat. Struct. Mol. Biol. 22: 652-3. VanderLinden, R.T., Hemmis C.W., Schmitt B., Ndoja A., Whitby, F.G., Robinson H., Cohen, R.E., Yao, T.* and Hill C.P.* (2015) "Structural Basis for the Activation and Inhibition of the Uch37 Deubiquitylase". Mol. Cell 57(5):901-11 *co-corresponding authors Muthurajan, U., Hepler, M.R.D., Hieb, A.R., Clark, N.J., Kramer, M., Yao, T., and Luger, K. (2014) "Automodification switches PARP-1 function from chromatin architectural protein to histone chaperone." Proc. Natl. Acad. Sci. USA 111:12752-7. Ndoja, A., and Yao, T. (2014) “A non-proteolytic function of ubiquitin in transcription repression.” Microb. Cell 1: 253-255. Long, L., Furgason, M., and Yao, T. (2014) “Non-hydrolyzable ubiquitin-histone mimics.” Methods 70: 134-8. Long, L., Thelen, J.P., Furgason, M., Haj-Yahya M., Brik A., Cheng, D., Peng, J. and Yao, T. (2014) “The U4/U6 recycling factor SART3 has histone chaperone activity and associates with USP15 to regulate H2B deubiquitination.” J. Biol. Chem. 289: 8916-30. Ndoja, A., Cohen, R.E., and Yao, T. (2014) “Ubiquitin signals proteolysis-independent stripping of transcription factors.” Mol. Cell 53: 893-903. Yao, T. (2013) “Ubiquitin Carboxyl-terminal Hydrolase 37.” Handbook of Proteolytic Enzymes Ndoja, A. and Yao, T. (2012) “Regulation of gene expression by the ubiquitin-proteasome system.” Sem. Cell Dev. Biol 23: 523-9. Samara, N.L., Datta, A.B., Berndsen, C.E., Zhang, X., Yao, T., Cohen, R.E., and Wolberger C. (2010) “Structural insights into the assembly and function of the SAGA deubiquitinating module.” Science 328: 1025-9 Yao, T., Song, L., Jin, J., Cai, Y., Takahashi, H., Swanson, S.K., Washburn, M.P., Florens, L., Conaway, R.C., Cohen, R.E., and Conaway, J.W. (2008) "Distinct modes of regulation of the Uch37 deubiquitinating enzyme in the proteasome and the INO80 chromatin remodeling complex." Mol Cell 31: 909-17. Cai, Y., Jin, J., Yao, T., Gottschalk, A.J., Swanson, S.K., Wu, S., Shi, Y., Washburn, M.P., Florens, L., Conaway, R.C., and Conaway, J.W. (2007) "Ubiquitous transcriptional regulator YY1 functions with the human INO80 chromatin remodeler to activate transcription." Nat. Struct. Mol. Biol. 14: 872-4. Cai, Y., Jin, J., Gottschalk, A.J., Yao, T., Conaway, J.W., Conaway, R.C. (2006) "Purification and assay of the human INO80 and SRCAP chromatin remodeling complexes." Methods 40(4):312-7. Abmayr, S., Yao, T., Parmely, T., and Workman, J.L. (2006) Preparation of nuclear and cytoplasmic extracts from mammalian cells. Curr. Protocols Mol. Biol. Unit 12.1.1-12.1.10 Yao, T., Song, L., Xu, W., DeMartino, G.N., Florens, L., Swanson, S.K., Washburn, M.P., Conaway, R.C., Conaway, J.W., and Cohen, R.E. (2006) "Proteasome recruitment and activation of the Uch37 deubiquitinating enzyme by Adrm1." Nat. Cell Biol. 8: 994-1002. Yao, T., and Cohen, R.E. (2005) "Ubiquitin-ovomucoid fusion proteins as model substrates for monitoring degradation and deubiquitination by proteasomes." Methods Enzymol. 398: 522-540. Jin, J., Cai, Y., Yao, T., Gottschalk, A.J., Florens, L., Swanson, S.K., Gutierrez, J.L., Coleman, M.K., Workman, J.L., Mushegian, A., Washburn, M.P., Conaway, R.C, and Conaway, J.W. (2005) "A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex." J. Biol. Chem. 280: 41207-41212. Conaway, R.C., Sato, S., Tomomori-Sato, C., Yao, T., Conaway, J.W. (2005) "The mammalian Mediator complex and its role in transcriptional regulation." Trends Biochem. Sci. 30: 250-255. Conaway, J.W., Florens, L., Sato, S., Tomomori-Sato, C., Parmely, T.J., Yao, T., Swanson, S.K., Banks, C.A., Washburn, M.P., Conaway, R.C. (2005) "The mammalian Mediator complex." FEBS Lett. 579: 904-908. Yao, T., and Cohen, R.E. (2002) "A cryptic protease couples deubiquitination and degradation by the proteasome." Nature 419: 403-407. Hu, M., Li, P., Li, M., Li, W., Yao, T., Wu, J.W., Gu, W., Cohen, R.E., Shi, Y. (2002) "Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde." Cell 111: 1041-1054. Yao, T., and Cohen, R.E. (2000) "Cyclization of polyubiquitin by the E2-25K ubiquitin-conjugating enzyme." J. Biol. Chem. 275: 36862-36868. Yao, T., and Cohen, R.E. (1999) "Giant proteases: beyond the proteasome." Curr. Biol. 9: R551-R553.