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Paris M, Villalta JE, Eisen MB, Lott SE. (2015) Sex Bias and Maternal Contribution to Gene Expression Divergence in Drosophila Blastoderm Embryos. PLoS Genetics. 11(10):e1005592.
Lott SE, Villalta JE, Zhou Q, Bachtrog D, Eisen MB. (2014) Sex-specific embryonic gene expression in species with newly evolved sex chromosomes. PLoS Genet 10(2): e1004159.
Paris M, Kaplan T, Li X.-Y, Villalta J.E, Lott SE, Eisen MB (2013) Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression. PLoS Genetics. 9(9):e1003748.
Ali-Murthy Z, Lott SE, Eisen MB, Kornberg TB. (2013) An Essential Role for Zygotic Expression in the Pre-Cellular Drosophila Embryo. PLoS Genetics. 9(4): e1003428.
Lott SE, Viallalta JE, Schroth GP, Luo S, Tonkin LA, Eisen MB. (2011) Non-canonical compensation of zygotic X transcription in early Drosophila melanogaster development revealed through single-embryo RNA-seq. PLoS Biology 9(2): e1000590.
Lott SE, Ludwig MZ, Kreitman M. (2011) Evolution and genetic analysis of early embryonic patterning in D. simulans and D. sechellia. Evolution. May;65(5):1388-99.
Miles CM, Lott SE, Luengo Hendriks CL, Ludwig MZ, Manu, Williams CL, Kreitman M. Artificial selection on egg size perturbs early pattern formation in Drosophila melanogaster. (2010) Evolution. Jan;65(1):33-42.
Lott S.E., Kreitman M, Palsson A, Alekseeva E, Ludwig MZ. Canalization of segmentation and its evolution in Drosophila. Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):10926-31.
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