Wu, Fang X. - University of Saskatchewan - Department of Biomedical Engineering

个人简介

B.Sc.,M.Sc. (DLUT), Ph.D. (NWPU), Ph.D. (Saskatchewan), P. Eng. Specialization Bionetwork analysis, Network control theory and its applications, Drug target identification, Biomedical signal and image processing and analysis, System identification and parameter estimation, Large scale biological data analysis, Machine learning Current and Past Projects Development of Methodologies for modeling and designing biological systems Development of real-time control methodologies for tandem mass spectrometry Computational bioengineering Laboratory Control engineering approaches to gene regulatory networks

近期论文

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Yuan, Z., Shi, J.H., Lin, W.J., Chen, B.L. and Wu, F.X. (2012). Features-based deisotoping method for tandem mass spectra, Advances in Bioinformatics, 2011(ID 210805), 1-2. Tian, L.P. and Wu, F.X. (2012). Stability and Bifurcations Analysis of Models for Zebrafish Somitogenesis, IEEE Transactions on Nanobioscience, 10(4), 239-247. Wu, F.X. (2012). Stability and Bifurcation of Ring-Structured Genetic Regulatory Networks with Time Delays, IEEE Transactions on Circuits and Systems I, 59(6), 1312-1320. Han, L.L., Wu, F.X., Sheng, J. and Ding, F. (2012). Two recursive least squares parameter estimation algorithms for multirate multiple-input systems by using the auxiliary model, Mathematics and Computers in Simulation, 82(5), 777-789. Liu, L.Z., Wu, F.X. and Zhang, W. (2012). Inference of Biological S-system Using Separable Estimation Method and Genetic Algorithm, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9(4), 955-965. Liang, X.J., Xia, Z.H., Zhang, L.W. and Wu, F.X. (2012). Inference of Gene Regulatory Subnetworks from Time Course Gene Expression Data, BMC Bioinformatics,, 13(S9: S3), 1-10. Tian, L.P., Liu, L.Z., Zhang, Q.W. and Wu, F.X. (2011). Nonlinear Model-based methods for clustering periodically expressed genes, TheScientificWorldJOURNAL, 11, 2051-2061. Wu, F.X. (2011). Global and Robust Stability Analysis of Genetic Regulatory Networks with Time-Varying Delays and Parameter Uncertainties, IEEE Transactions on Biomedical Circuits and Systems, 5(4), 391-398. Wu, F.X. (2011). Delay-Independent Stability of Genetic Regulatory Networks, IEEE Transaction on Neural Networks, 22(11), 1685-1693. Shi, J.H. and Wu, F.X. (2011). Peptide Charge State Determination of Tandem Mass Spectra from Low-Resolution Collision Induced Dissociation, BMC Proteome Science, 9(S1:S3), 1-8. Yan, Y., Zhang, S.G. and Wu, F.X. (2011). Applications of Graph Theory in Protein Structure Identification, BMC Proteome Science,, 9(S1:S17), 1-10. Zhang, J., McQuillan, I. and Wu, F.X. (2011). Speed Improvements of Peptide-Spectrum Matching Using SIMD Instructions, Proteomics, 11(19), 3779-3785. Cheng, L., Hou, Z.G., Lin, Y., Tan, M., Zhang, W. and Wu, F.X. (2011). A Recurrent Neural Network for Non-Smooth Convex Optimization Problems with an Application to the Identification of Genetic Regulatory Networks,, IEEE Transaction on Neural Networks, 22(5), 714-726. Wu, F.X. and Huan, J. (2011). Special Focus on Bioinformatics and Systems Biology, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 8(2), 292-293. Ding, J.D., Shi, J.H. and Wu, F.X. (2011). SVM-RFE based feature selection for tandem mass spectrum quality assessment,, International Journal of Data Mining and Bioinformatics, 5(1), 73-88. Zou, A.M., Shi, J.H., Ding, J.D. and Wu, F.X. (2010). Charge state determination of peptide tandem mass spectra using support vector machine (SVM), IEEE Transaction on Information Technology in Biomedicine, 14(3), 552-558. Wu, F.X., Shi, Z.K. and Mu, L. (2010). Estimating parameters in the caspase activated apoptosis system, International Journal of Biomedical Engineering and Technology, 4(4), 338-354. Wu, F.X., Mu, L. and Shi, Z.K. (2010). Estimation of Parameters in Rational Reaction Rates of Molecular Biological Systems via Weighted Least Squares, International Journal of Systems Science, 40(1), 73-80. Wu, F.X. and Zhang, W. (2010). Dynamic model-based method for selecting genes from time-course expression profiles, IEEE Transaction on Information Technology in Biomedicine, 14(1), 16-22. Koh, C., Wu, F.X., Selvaraj, G. and Kusalik, A. (2009). "Using a state-space model and location analysis to infer time-delayed gene regulatory networks",, EURASIP Journal on Bioinformatics and Systems Biology, 2009(Article ID 484601), 1-14. Shi, J.H. and Wu, F.X. (2009). Protein Inference by Assembling Peptides Identified from Tandem Mass Spectra, Current Bioinformatics, 4(3), 226-233. Ding, J.D., Shi, J.H. and Wu, F.X. (2009). Quality assessment of tandem mass spectra by using a weighted k-means, Clinical Proteomics, 5(1), 15-22. Hang, X.Y. and Wu, F.X. (2009). l1 least square for cancer diagnosis using gene expression data, Journal of Computer Science and System Biology, 2(2), 167-173.. Hang, X.Y. and Wu, F.X. (2009). Sparse Representation for the Classification of Tumors Using Gene Expression Data, Journal of Biomedicine and Biotechnology, 2009(Article ID 403689), 1-6. Ding, J.D., Shi, J.H., Poirier, G.G. and Wu, F.X. (2009). A novel approach to denoising ion trap tandem mass spectra, BMC Proteome Science, 7(:9), 1-12.