个人简介
教育经历
2008年-2013年,山东大学,计算生物化学,理学博士
2004年-2008年,山东大学,化学,理学学士
主要职历
2016年-至今,华中农业大学,信息学院,副教授,硕士生导师
2016年9月,台湾交通大学,应用化学系,访问学者
2013年-2015年,中国科学院青岛生物能源与过程研究所,助理研究员、副研究员
研究领域
生物信息学
主要围绕复杂生物大分子的动态行为和光动力学现象结合高性能计算平台展开研究。我们侧重于发展包括新一代的分子间相互作用力场、动力学方案,并结合高性能计算与数据挖掘突破现有理论模拟的瓶颈;发展适合的理论模拟方法,实现对生物大分子光激发过程的实时模拟,目前作为主要作者之一,设计编写了JADE 程序包,完成了面向复杂分子体系激发态过程的动力学方法的设计和改进(https://github.com/jade-package),为复杂分子体系的激发态光化学研究提供了有效的研究工具。
近期论文
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Likai Du, Zhenggang Lan*, An on-the-fly surface-hopping program JADE for nonadiabatic molecular dynamics of poly-atomic systems: implementation and applications; J. Chem. Theory Comput., 2015, 11, 1360
Likai Du*, Cuihuan Geng, Dongju Zhang*, Zhenggang Lan*, and Chengbu Liu, Atomic Resolution Insights into the Structural Aggregations and Optical Properties of Neat Imidazolium-Based Ionic Liquids; J. Phys. Chem. B, 2016, 120, 6721
Likai Du, Zhenggang Lan*, Ultrafast Structural Flattening Motion in Photoinduced Excited State Dynamics of a Bis(dimine) Copper(I) Complex; Phys. Chem. Chem. Phys., 2016, 18, 7641-7650
Fang Liu, Likai Du*, Dongju Zhang, Jun Gao*, Performance of density functional theory on the anisotropic halogen•••halogen interactions and potential energy surface: Problems and possible solutions; 2016, 116, 710
Fang Liu, Likai Du*, Lili Wang, Jun Gao*, Chengbu Liu, Application of polarizable ellipsoidal force field model to pnicogen bonds; J. Comput. Chem., 2015 , 36, 441
Likai Du, Jun Gao*, Chengbu Liu*; A Polarizable Ellipsoidal Force Field for Halogen Bonds; J. Comput. Chem. 2013, 34, 2032 Likai Du, Jun Gao*, Yongjun Liu, Chengbu Liu*; Water-Dependent Reaction Pathways: An Essential Factor for the Catalysis in HEPD Enzyme; J. Phys. Chem. B, 2012, 116, 11837
Likai Du, Jun Gao*, Yongjun Liu, Dongju Zhang, Chengbu Liu*; The Reaction Mechanism of Hydroxyethylphosphonate Dioxygenase: a QM/MM Study; Org. Biomol. Chem., 2012, 10, 1014
Jing Huang, Likai Du, Jun Wang, Zhenggang Lan*, Photoinduced Excited-State Energy-Transfer Dynamics of a Nitrogen-Cored Symmetric Dendrimer: From the Perspective of the Jahn–Teller Effect, J. Phys. Chem. C, 2015, 119, 7578
Jing Huang, Likai Du, De-Ping Hu, Zhenggang Lan*, Theoretical Analysis of Excited States and Energy Transfer Mechanism in Conjugated Dendrimers; J. Comput. Chem. 2015, 36, 151
Cuihuan Geng, Likai Du, Fang Liu, Rongxiu Zhu*, Chengbu Liu*, Theoretical study on the mechanism of selective fluorination of aromatic compounds with Selectfluor, RSC Adv., 2015, 5, 33385
Yanwei Li, Ruiming Zhang, Likai Du, Qingzhu Zhang, Wenxing Wang, Insights into the catalytic mechanism of chlorophenol 4-monooxygenase: a quantum mechanics/molecular mechanics study; RSC Adv., 2015; 5, 13871
Yanwei Li, Likai Du, Yueming Hu, Xiaomin Sun, Jingtian Hu*; Theoretical Study on the Aging and Reactivation Mechanism of Tabun-Inhibited Acetylcholinesterase by Using the Quantum Mechanical/Molecular Mechanical Method; Can. J. Chem., 2012,90, 376
Yang Wang, Likai Du, Jie Zhang, Shengyu Feng*; A Thermosensitive Supramolecular Aggregation from Linear Telechelic Polydimethylsiloxane with Self-assembly Units; J. Polym. Res., 2011, 18, 1635
Qianqian Hou, Likai Du , Jun Gao , Yongjun Liu *, and Chengbu Liu; QM/MM Study on the Reaction Mechanism of O6-Alkylguanine DNA lkyltransferase; J. Phys. Chem. B, 2010, 114, 15296
Jinghua Li, Likai Du, Lushan Wang*; Glycosidic-bond hydrolysis mechanism catalyzed by cellulase Cel7A from Trichoderma reesei: a comprehensive theoretical study by performing MD, QM, and QM/MM calculations; J. Phys. Chem. B, 2010, 114, 15261