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An L. & Harrison P.M. (2016) The evolutionary scope and neurological disease linkage of yeast-prion-like proteins in humans. Biology Direct 11: 32.
An L., Fitzpatrick D.A. & Harrison P.M. (2016) Emergence and evolution of prion and prion-like proteins in budding yeasts. BMC Evolutionary Biology 16: 24.
Reimer J, Aloise M.N., Harrison P.M. & Schmeing T.M. (2016) Synthetic cycle of the initiation module of a formylating nonribosomal peptide synthetase. Nature 529: 239–242.
Narasumani M., Harrison P.M. (2015) Bioinformatical parsing of folding-on-binding proteins reveals their compositional and evolutionary sequence design. Scientific Reports 5: 18586.
Bouchard J., Oliver C., Harrison P.M. (2015) The distribution and evolution of Arabidopsis thaliana cis natural antisense transcripts. BMC Genomics 9: 444.
Harbi D, Harrison P.M. (2014) Classifying prion and prion-like phenomena. Prion 8 (2): 27960.
Harbi D, Harrison P.M. (2014) Interaction networks of prion, prionogenic and prion-like proteins in budding yeast, and their role in gene regulation. PLoS ONE 9 (6): e100615.
Harrison P.M. (2014) Computational methods for pseudogene annotation based on sequence homology. Methods Mol Biol 1167: 27-39.
Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, Town CD, Edger PP, Pires JC, Schumaker KS, Jarvis DE, Mandáková T, Lysak MA, van den Bergh E, Schranz ME, Harrison PM, Moses AM, Bureau TE, Wright SI, Blanchette M. (2013) An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nature Genetics 45: 891-898.
Gendoo DMA, Harrison PM (2012) The Landscape of the Prion Protein's Structural Response to Mutation Revealed by Principal Component Analysis of Multiple NMR Ensembles. PLoS Comput Biol 8 (8): e1002646. doi:10.1371/journal.pcbi.1002646
Djamel Harbi, Marimuthu Parthiban, Deena M.A. Gendoo, Sepehr Ehsani, Manish Kumar, Gerold Schmitt-Ulms, Ramanathan Sowdhamini and Paul M. Harrison (2012) PrionHome: A database of prions and other sequences relevant to prion phenomena. PLoS One. 2012;7 (2):e31785. Epub 2012 Feb 20.
Gendoo DMA, Harrison PM (2011) Origins and Evolution of the HET-s Prion-Forming Protein: Searching for Other Amyloid-Forming Solenoids. PLoS ONE 6 (11): e27342. doi:10.1371/journal.pone.0027342
Ehsani S, Tao R, Pocanschi CL, Ren H, Harrison PM, Schmitt-Ulms, GS (2011) Evidence for Retrogene Origins of the Prion Gene Family. PLoS ONE 6 (10): e26800. doi:10.1371/journal.pone.0026800
Harbi, D, Parthiban, M, Gendoo, D, Ehsani, S, Kumar, M, Schmitt-Ulms, G, Sowdhamini, R, and Harrison, PM (2011) PrionOme: A database of prions and other sequences relevant to prion phenomena. Nature Precedings, npre.2011.6430.1.
Westaway D, Daude N, Wohlgemuth S, Harrison P (2011) The PrP-like proteins Shadoo and Doppel. Top Curr Chem. 2011;305: 225-56.
Gendoo, D. & Harrison, P.M. (2011) Discordant and chameleon sequences: their distribution, and their implications for amyloidogenicity. Protein Science, DOI 10.1002/pro.590.
Harbi, D., Kumar, M. & Harrison, P.M. (2011) LPS-Annotate: complete annotation of compositionally-biased regions in the protein knowledgebase. Database (Oxford), doi: 10.1093/database/baq031.
De Lima Morais, D. & Harrison, P.M. (2010) Large-scale evidence for conservation of NMD candidature across mammals. PLoS ONE 5 (7): e11695. doi:10.1371/journal.pone.0011695.
Khachane, A. & Harrison, P.M. (2010) Mining mammalian transcript data for functional long non-coding RNAs. PLoS ONE 5 (4): e10316. doi:10.1371/journal.pone.0010316.
Harrison, P.M., Khachane, A & Kumar, M. (2010) Genomic assessment of the evolution of the prion protein gene family in vertebrates. Genomics 95 (5): 268-77.
Khachane, AN & Harrison, PM. (2009) Strong association between pseudogenization mechanisms and gene sequence length. Biology Direct 4: 38.
Khachane, AN & Harrison, PM. (2009) Assessing the genomic evidence for conserved transcribed pseudogenes under selection. BMC Genomics 10: 435 [DATA HERE]
De Lima Morais, D. & Harrison, P.M. (2009) Genomic evidence for non-random endemic populations of decaying exons from mammalian genes. BMC Genomics 10: 309. [DATA HERE]
McEwen LA, Harris D, Schmid RF, Vogel J, Western T, Harrison P. (2009) Evaluation of the redesign of an undergraduate cell biology course. CBE Life Sci. Educ. 8 (1): 72-8.
M. Logan, T. Nguyen, N. Szapiel, J. Knockleby, H. Por, M. Zadworny, M. Neszt, P. Harrison, H. Bussey, C. Mandato, J. Vogel & G. Lesage. (2008) Genetic interaction network of the Saccharomyces cerevisiae type 1 phosphatase Glc7. BMC Genomics 9: 336.