近期论文

查看导师新发文章 （温馨提示：请注意重名现象，建议点开原文通过作者单位确认）

Hoen, D. Bourque, G., Casacuberta, J., Cordaux, R., Feschotte, C., Fiston-Lavier, A.-S., Hua-Van, A., Hubley, R., Kapusta, A., Lerat, E., Maumus, F., Pollock, D., Quesneville, H., Smit, A., Wheeler, T., Bureau, T. and Blanchette, M. (2015) A call for benchmarking transposable element annotation methods. Mobile DNA 6:13 DOI 10.1186/s13100-015-0044-6. Hoen, D. and Bureau, T. (2015) Discovery of novel genes derived from transposable elements using integrative genomic analysis. Molecular Biology and Evolution 32(6):1487–1506 doi:10.1093/molbev/msv042. Vello, E,. Tomita, A., Diallo, A.-O., and Bureau, T. (2015) A comprehensive approach to assess Arabidopsis survival phenotype in waterlimited condition using a non-invasive high-throughput phenomics platform. Frontiers in Plant Science 6:1101. doi: 10.3389/fpls.2015.01101. Edger, P., Heidel-Fischer, H., Bekaert, M., Rota, J., Glöckner, G., Platts, A., Heckel, D., Der, J., Wafula, E., Tang, M., Hofberger, J., Smithson, A., Hall, J., Blanchette, M., Bureau, T., Wright, S., dePamphilis, C., Schranz, M., Barker, M., Conant, G., Wahlberg, N., Vogel, H., Pires, J., and Wheat. C. (2015) The butterfly plant arms-race escalated by gene and genome duplication. Proceedings of the National Academy of Sciences USA 112: 8362–8366. Joly-Lopez, Z. and Bureau, T. (2014)Diversity and evolution of transposable elements in Arabidopsis. Chromosomal Research 22, 203-216. Bureau, T. (2014) MUG1†and†MUG2†of the domesticated transposon gene family†MUSTANG†are necessary for†Arabidopsis thaliana†fitness, poster presentation, International Conference on Arabidopsis Research, Portland, Oregon USA, July 2014. Bureau, T. (2014) MUSTANG 7: A domesticated†transposable element with a†low temperature stress phenotype, poster presentation, International Conference on Arabidopsis Research, Portland, Oregon USA, July 2014. Bureau, T. (2014) Functional characterization of Tophat, a domesticated hAT-like transposable element gene, poster presentation, International Conference on Arabidopsis Research, Portland, Oregon USA, July 2014. Bureau, T. (2014) High-throughput screening to detect drought tolerance genotypes in Arabidopsis using a non-invasive phenomics platform, poster presentation, International Conference on Arabidopsis Research, Portland, Oregon USA, July 2014. Haudry, A., Platts, A., Vello, E., Hoen, D., Leclercq, M., Williamson, R., Forczek, E., Joly-Lopez, Z., Steffen, J., Hazzouri, K., Dewar, K., Stinchcombe, J., Schoen, D., Wang, X., Schmutz, J., Town, C., Edger, P., Pires, J., Schumaker, K., Jarvis, D., Mand·kov·, T., Lysak, M., Schranz, M., van den Bergh, E., Harrison, P., Moses, A.*, Bureau, T.*, Wright, S.*, Blanchette, M.* (2013) An Atlas of over 90,000 Conserved Non-Coding Sequences Yields a Detailed Map of Crucifer Regulatory Regions. Nature Genetics doi:10.1038/ng.2684 ZoÈ Joly-Lopez, Ewa Forczek, Douglas R. Hoen, Nikoleta Juretic, and Thomas E. Bureau (2012). A Gene Family Derived from Transposable Elements during Early Angiosperm Evolution Has Reproductive Fitness Benefits in Arabidopsis thaliana. PLoS Genetics 8: e1002931 Hoen, D. and Bureau, T. (2012) Transposable Element Exaptation in Plants. Plant Transposable Elements: Topics in Current Genetics 24: 219-251. Elrouby, N. and Bureau, T.E. (2011) Modulation of AUXIN-BINDING PROTEIN 1 gene expression in maize and the teosintes by transposon insertions in its promoter. Molecular Genomics and Genetics, 267: 143-153.(Talk highlighted in the article Transposable elements ≠ Are they good for you after all? By John Brookfield, Genetics Society News, 65, pp. 20-24.) Elrouby, N. and Bureau, T. (2010) Bs1, a new chimeric gene formed by retrotransposon-mediated exon shuffling in maize. Plant Physiology 153:1413-1424. McNally, K., Childs, K., Bohnert, R., Davidson, R. Zhao, K., Ulat, V., Zeller, G., Clark, R., Hoen, D., Bureau, T., Stokowski, R., Ballinger, D., Frazer, K., Cox, D., Padhukasahasram, B., Bustamante, C., Weigel, D., Mackill, D., Bruskiewich, R., Rätsch, G., Buell, C., Leung, H., and Leach, J. (2009) Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences USA 106:12273-12278. Kwon, S.-J., Park, K.C., Son, J.-H., Bureau, T., Park, C.-H. and Kim, N.-S. (2009) Sequence diversity of a domesticated transposase gene, MUG1, in Oryza species. Molecules and Cells 27:459-465. Hoen, D. and Bureau, T. as part of the Rice Annotation Project (2008) The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Research 36:1028-1033. Kim, N.-S., Park, K.-C., Kwon, S.-J., Kim, P.-H and Bureau, T. (2008) Gene structure dynamics and divergence of the polygalacturonase gene family of plants and fungus. Genome 51: 30-40. Hoen, D. and Bureau, T. as part of the Rice Annotation Project (2007) Curated Genome Annotation of Oryza sativa ssp. Japonica and Comparative Genome Analysis with Arabidopsis thaliana. Genome Research 17:175-183. Hoen, D., Park, K.-C., Elrouby, N., Yu, Z., Mohabir, N., Cowan, R. and Bureau, T. (2006) Transposon-mediated expansion and diversification of a family of ULP-like genes. Molecular Biology and Evolution 23:1254-1268. Cowan, R., Hoen, D., Schoen, D. and Bureau, T. (2005) MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms. Molecular Biology and Evolution 22:2084-2089. Juretic, N., Hoen, D., Huynh, M., Harrison, P. and Bureau, T. (2005) The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Research 15: 1292-1297. Rated “9.0” or exceptional by the Faculty of 1000. IRGSP (Transposon section: Juretic, N., Hoen, D., Wright, S., Bruskiewich, R. and Bureau, T.) (2005) The map-based sequence of the rice genome. Nature 436: 793-800. MacKenzie, J., Saade, F., Le, Q.-H., Bureau, T., and Schoen, D. (2005) Effects of UV-B exposure on rates of genomic mutation and transposon mobility in Arabidopsis thaliana. Genetics 171:715-723.