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Roelke, D. L., and Spatharis, S. (2015) Phytoplankton succession in recurrently fluctuating environments. PLoS ONE, 10(3), e0121392. (doi:10.1371/journal.pone.0121392) (PMID:25803437) (PMCID:PMC4372531)
Roelke, D. L., and Spatharis, S. (2015) Phytoplankton assemblage characteristics in recurrently fluctuating environments. PLoS ONE, 10(3), e0120673. (doi:10.1371/journal.pone.0120673) (PMID:25799563) (PMCID:PMC4370464)
Tamvakis, A., Trygonis, V., Miritzis, J., Tsirtsis, G., and Spatharis, S. (2014) Optimizing biodiversity prediction from abiotic parameters. Environmental Modelling & Software, 53, pp. 112-120. (doi:10.1016/j.envsoft.2013.12.001)
Spatharis, S., and Tsirtsis, G. (2013) Zipf–Mandelbrot model behavior in marine eutrophication: two way fitting on field and simulated phytoplankton assemblages. Hydrobiologia, 714(1), pp. 191-199. (doi:10.1007/s10750-013-1536-3)
Smeti, E., Kormas, K.A., and Spatharis, S. (2013) A non-phylogenetic alpha diversity approach on prokaryotic community structure in aquatic systems. Ecological Indicators, 29, pp. 361-366. (doi:10.1016/j.ecolind.2013.01.027)
Spyropoulou, A., Spatharis, S., Papantoniou, G., and Tsirtsis, G. (2013) Potential response to climate change of a semi-arid coastal ecosystem in eastern Mediterranean. Hydrobiologia, 705(1), pp. 87-99. (doi:10.1007/s10750-012-1384-6)
Tamvakis, A., Miritzis, J., Tsirtsis, G., Spyropoulou, A., and Spatharis, S. (2012) Effects of meteorological forcing on coastal eutrophication: modeling with model trees. Estuarine, Coastal and Shelf Science, 115, pp. 210-217. (doi:10.1016/j.ecss.2012.09.003)
Roelke, D.L., Spatharis, S., and Mitrovic, S.M. (2012) A new hydrology: effects on ecosystem form and functioning. Canadian Journal of Fisheries and Aquatic Sciences, 69(8), pp. 1377-1379. (doi:10.1139/f2012-085)
Carteron, A., Jeanmougin, M., Leprieur, F., and Spatharis, S. (2012) Assessing the efficiency of clustering algorithms and goodness-of-fit measures using phytoplankton field data. Ecological Informatics, 9, pp. 64-68. (doi:10.1016/j.ecoinf.2012.03.008)
Spatharis, S., Skliris, N., Meziti, A., Kormas, K.A., and Weyhenmeyer, G. (2012) First record of a trichodesmium erythraeumbloom in the mediterranean sea. Canadian Journal of Fisheries and Aquatic Sciences, 69(8), pp. 1444-1455. (doi:10.1139/f2012-020)
Tsirtsis, G., and Spatharis, S. (2011) Simulating the structure of natural phytoplankton assemblages: descriptive vs. mechanistic models. Ecological Modelling, 222(12), pp. 1922-1928. (doi:10.1016/j.ecolmodel.2011.03.029)
Spatharis, S., Roelke, D.L., Dimitrakopoulos, P.G., and Kokkoris, G.D. (2011) Analyzing the (mis)behavior of Shannon index in eutrophication studies using field and simulated phytoplankton assemblages. Ecological Indicators, 11(2), pp. 697-703. (doi:10.1016/j.ecolind.2010.09.009)
Spatharis, S., Orfanidis, S., Panayotidis, P., and Tsirtsis, G. (2011) Assembly processes in upper subtidal macroalgae: the effect of wave exposure. Estuarine, Coastal and Shelf Science, 91(2), pp. 298-305. (doi:10.1016/j.ecss.2010.10.032)
Spatharis, S., and Tsirtsis, G. (2010) Ecological quality scales based on phytoplankton for the implementation of Water Framework Directive in the Eastern Mediterranean. Ecological Indicators, 10(4), pp. 840-847. (doi:10.1016/j.ecolind.2010.01.005)
Spatharis, S., Dolapsakis, N.P., Economou-Amilli, A., Tsirtsis, G., and Danielidis, D.B. (2009) Dynamics of potentially harmful microalgae in a confined Mediterranean Gulf—assessing the risk of bloom formation. Harmful Algae, 8(5), pp. 736-743. (doi:10.1016/j.hal.2009.03.002)
Spatharis, S., Mouillot, D., Chi, T.D., Danielidis, D.B., and Tsirtsis, G. (2009) A niche-based modeling approach to phytoplankton community assembly rules. Oecologia, 159(1), pp. 171-180. (doi:10.1007/s00442-008-1178-8)
Spatharis, S., Mouillot, D., Danielidis, D.B., Karydis, M., Chi, T.D., and Tsirtsis, G. (2008) Influence of terrestrial runoff on phytoplankton species richness-biomass relationships: a double stress hypothesis. Journal of Experimental Marine Biology and Ecology, 362(1), pp. 55-62. (doi:10.1016/j.jembe.2008.06.003)
Tsirtsis, G., Spatharis, S., and Karydis, M. (2008) Application of the lognormal equation to assess phytoplankton community structural changes induced by marine eutrophication. Hydrobiologia, 605(1), pp. 89-98. (doi:10.1007/s10750-008-9307-2)
Tsirtsis, G., Spatharis, S., Sampatakaki, A., and Spyropoulou, A. (2008) Thresholds of terrestrial nutrient loading for the development of eutrophication episodes in a coastal embayment in the Aegean Sea. Translational Waters Bulletin, 2(3), pp. 25-37. (doi:10.1285/i1825229Xv2n3p25)
Spatharis, S., Danielidis, D.B., and Tsirtsis, G. (2007) Recurrent Pseudo-nitzschia calliantha (Bacillariophyceae) and Alexandrium insuetum (Dinophyceae) winter blooms induced by agricultural runoff. Harmful Algae, 6(6), pp. 811-822. (doi:10.1016/j.hal.2007.04.006)
Spatharis, S., Tsirtsis, G., Danielidis, D.B., Chi, T.D., and Mouillot, D. (2007) Effects of pulsed nutrient inputs on phytoplankton assemblage structure and blooms in an enclosed coastal area. Estuarine, Coastal and Shelf Science, 73(3-4), pp. 807-815. (doi:10.1016/j.ecss.2007.03.016)
Mouillot, D., Spatharis, S., Reizopoulou, S., Laugier, T., Sabetta, L., Basset, A., and Do Chi, T. (2006) Alternatives to taxonomic-based approaches to assess changes in transitional water communities. Aquatic Conservation, 16(5), pp. 469-482. (doi:10.1002/aqc.769)
Copp, G.H., Spatharis, S., and Turmel, M. (2005) Consistency of diel behaviour and interactions of stream fishes and invertebrates during summer. River Research and Applications, 21(1), pp. 75-90. (doi:10.1002/rra.833)