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Bird, C., Darling, K.F., Russell, A.D., Davis, C.V., Fehrenbacher, J., Free, A., Wyman, M. and Ngwenya, B.T. (2017) Cyanobacterial endobionts within a major marine, planktonic, calcifier (Globigerina bulloides, Foraminifera) revealed by 16S rRNA metabarcoding. Biogeosciences, 14: 901-920.
Robinson, G., Caldwell, G.S., Wade, M.J., Free, A., Jones, C.L.W. and Stead, S.M. (2016) Profiling bacterial communities associated with sediment-based aquaculture bioremediation systems under contrasting redox regimes. Scientific Rep, 6: 38850. doi: 10.1038/srep38850
Widder, S., Allen, R., Pfeiffer, T., Curtis, T., Wiuf, C., Sloan, W., Cordero, O., Brown, S., Momeni, B., Shou, W., Kettle, H., Flint, H., Haas, A., Kreft, J., Laroche, B., Rainey, P., Milferstedt, K., Grosskopf, T., Jin, Q., Freilich, S., Schuster, S., Huisman, J., Free, A., Quince, C., Labarthe, S., Wang, H., Smeths, B., Klapper, I., Picioreanu, C., Isaac Newton Institute Fellows and Soyer, O. (2016) Challenges in microbial ecology: building predictive understanding of community behaviour. ISME J, 10: 2557-2568.
Bush, T., Butler, I.B., Free, A. and Allen, R.J. (2015) Redox regime shifts in microbially mediated biogeochemical cycles. Biogeosciences, 12: 3713-3724.
Glendinning, L., Nausch, N., Free, A., Taylor, D.W. and Mutapi, F. (2014) The microbiota and helminths: Sharing the same niche in the human host. Parasitology, 141: 1255-1271.
Glendinning, L. and Free, A. (2014) Supra-organismal interactions in the human intestine. Front Cell Infect Microbiol, 4: 47. doi: 10.3389/fcimb.2014.00047
Pagaling, E., Strathdee, F., Spears, B.M., Cates, M.E., Allen, R.J. and Free, A. (2014) Community history affects the predictability of microbial ecosystem development. ISME J, 8: 19-30.
Strathdee, F. and Free, A. (2013). Denaturing gradient gel electrophoresis. In DNA Electrophoresis: Methods and Protocols. Ed: S. Makovets. Methods in Molecular Biology series, Humana Press, USA, pp. 145-157.
Pereira-Medrano, A., Knighton, M., Fowler, G.J.S., Ler, Z.Y., Pham, T.K., Ow, S.W., Free, A., Ward, F.B. and Wright, P.C. (2013). Quantitative proteomic analysis of the exoelectrogenic bacterium Arcobacter butzleri ED-1 reveals increased abundance of a flagellin protein under anaerobic growth on an insoluble electrode. J Proteomics, 78: 197-210.
Khatri, B.S., Free, A. and Allen, R.J. (2012). Oscillating microbial dynamics driven by small populations, limited nutrient supply and high death rates. J Theor Biol, 314: 120-129.
Toh, H., Sharma, V.K., Oshima, K., Kondo, S., Hattori, M., Ward, F.B., Free, A. and Taylor, T.D. (2011) Complete genome sequences of Arcobacter butzleri ED-1 and Arcobacter sp.-L, isolated from a microbial fuel cell. J Bacteriol 193: 6411-6412.
Tota-Maharaj, K., Scholz, M., Ahmed, T., French, C. and Pagaling, E. (2010) The synergy of permeable pavements and geothermal heat pumps for stormwater treatment and reuse. Env Technol 31: 1517-1531.
Fedorovich, V., Knighton, M.C., Pagaling, E., Ward, F.B., Free, A. and Goryanin, I. (2009) A novel electrochemically active bacterium phylogenetically related to Arcobacter butzleri isolated from a microbial fuel cell. Appl Env Microbiol 75: 7326-7334.
Stoebel, D.M., Free, A. and Dorman, C.J. (2008) Anti-silencing: overcoming H-NS-mediated repression of transcription in Gram-negative enteric bacteria. Microbiology 154: 2533-2545.
Free, A. and Barton, N.H. (2007) Do evolution and ecology need the Gaia hypothesis? Trends Ecol Evol 22: 611-619.