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Hu, Y., Kasivisvanathan, V., Simmons, L., Clarkson, M., Thompson, S., Shah, T., ...Emberton, M. (2016). Development and Phantom Validation of a 3D-Ultrasound-Guided System for Targeting MRI-visible Lesions during Transrectal Prostate Biopsy. IEEE Transactions on Biomedical Engineering,
Thompson, S.A., Schneider, C., Gurusamy, K., Hawkes, D., Davidson, B., Clarkson, M. (2016). Development, Validation, and Modelling of Image Guidance Systems for Surgery. Presented at: Young Researchers' Futures Meeting Imperial College, London.
Thompson, S., Stoyanov, D., Schneider, C., Gurusamy, K., Ourselin, S., Davidson, B., ...Clarkson, M.J. (2016). Hand-eye calibration for rigid laparoscopes using an invariant point. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 11 (6), 1071-1080. doi:10.1007/s11548-016-1364-9
Hill, E.R., Xia, W., Clarkson, M.J., Desjardins, A.E. (2016). Identification and removal of laser-induced noise in photoacoustic imaging using singular value decomposition. Biomed. Opt. Express, 8 68-77. doi:10.1364/BOE.8.000068
Schneider, C., Johnson, S.P., Walker-Samuel, S., Gurusamy, K., Clarkson, M.J., Thompson, S., ...Desjardins, A.E. (2016). Utilizing confocal laser endomicroscopy for evaluating the adequacy of laparoscopic liver ablation. LASERS IN SURGERY AND MEDICINE, 48 (3), 299-310. doi:10.1002/lsm.22464
Thompson, S., Totz, J., Song, Y., Stoyanov, D., Ourselin, S., Hawkes, D., Clarkson, M. (2015). Accuracy validation of an image guided laparoscopy system for liver resection.
Johnsen, S.F., Taylor, Z.A., Han, L., Hu, Y., Clarkson, M.J., Hawkes, D.J., Ourselin, S. (2015). Detection and modelling of contacts in explicit finite-element simulation of soft tissue biomechanics. International Journal of Computer Assisted Radiology and Surgery, 1-19. doi:10.1007/s11548-014-1142-5
Song, Y., Totz, J., Thompson, S., Johnsen, S., Barratt, D., Schneider, C., ...Hawkes, D. (2015). Locally rigid, vessel-based registration for laparoscopic liver surgery. International Journal of Computer Assisted Radiology and Surgery, 1-11. doi:10.1007/s11548-015-1236-8
Johnsen, S.F., Taylor, Z.A., Clarkson, M.J., Hipwell, J., Modat, M., Eiben, B., ...Hawkes, D.J. (2015). NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics.. INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY, 10 (7), 1077-1095. doi:10.1007/s11548-014-1118-5
Allan, M., Thompson, S., Clarkson, M., Ourselin, S., Hawkes, D., Kelly, J., Stoyanov, D. (2014). 2D-3D pose tracking of rigid instruments in minimally invasive surgery.
Zombori, G., Rodionov, R., Nowell, M., Zuluaga, M., Clarkson, M., Micallef, C., ...McEvoy, A. (2014). A computer assisted planning system for the placement of sEEG electrodes in the treatment of epilepsy.
Totz, J., Thompson, S., Stoyanov, D., Gurusamy, K., Davidson, B., Hawkes, D., Clarkson, M. (2014). Fast semi-dense surface reconstruction from stereoscopic video in laparoscopic surgery..
Clarkson, M.J., Zombori, G., Thompson, S., Ourselin, S. (2014). NiftyLink.
Clarkson, M.J., Zombori, G., Thompson, S., Totz, J., Song, Y., Espak, M., ...Ourselin, S. (2014). The NifTK Software Platform for Image Guided Interventions. International Journal of Computer Assisted Radiology and Surgery,
Scahill, R.I., Ridgway, G.R., Barnes, J., Ryan, N.S., Clarkson, M.J., Foster, J., ...Warren, J.D. (2013). Genetic influences on atrophy patterns in familial AD: a comparason of APP and PSEN-1 mutations. Journal of AD, 35 199-212. doi:10.3233/JAD-121255
Osoria, E., Finnegan, S., Clarkson, M., Timoteo, S., Brandao, I., Roma-Torres, A., ...Bastos-Leite, A. (2013). Usefulness of quantitative registration techniques applied to serial magnetic resonance imaging to assess brain volume changes in anorexia nervosa.
Modat, M., Cardoso, M.J., Cash, D.M., Leung, K.K., Clarkson, M.J., Barnes, J., ...Ourselin, S. (2012). A Pipeline for efficient segmentation using a large template library..
Fonteijn, H.M., Modat, M., Clarkson, M.J., Barnes, J., Lehmann, M., Hobbs, N.Z., ...Fox, N.C. (2012). An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease.. NEUROIMAGE, 60 (3), 1880-1889. doi:10.1016/j.neuroimage.2012.01.062
Cash, D.M., Melbourne, A., Modat, M., Machado, M., Clarkson, M., Fox, N., Ourselin, S. (2012). Cortical Folding Analysis on Patients with Alzheimer’s Disease and Mild Cognitive Impairment.
Rohrer, J.D., Clarkson, M.J., Kittus, R., Rossor, M.N., Ourselin, S., Warren, J.D., Fox, N.C. (2012). Rates of hemispheric and lobar atrophy in the language variants of frontotemporal lobar degeneration.. JOURNAL OF ALZHEIMERS DISEASE, 30 (2), 407-411. doi:10.3233/JAD-2012-111556
Clarkson, M.J., Cardoso, M.J., Modat, M., Ridgway, G.R., Leung, K.K., Rohrer, J.D., ...Fox, N. (2011). A Comparative Study of Voxel and Surface Based Cortical Thickness Methods in Frontotemporal Dementia.
Clarkson, M.J., Cardoso, M.J., Ridgway, G.R., Modat, M., Leung, K.K., Rohrer, J.D., ...Ourselin, S. (2011). A comparison of voxel and surface based cortical thickness estimation methods. NeuroImage, 57 (3), 856-865. doi:10.1016/j.neuroimage.2011.05.053
Fonteijn, H., Clarkson, M., Modat, M., Barnes, J., Lehmann, M., Ourselin, S., ...Alexander, D. (2011). An Event-Based Disease Progression Model and Its Application to Familial Alzheimer’s Disease.
Leung, K.K., Ridgway, G.R., Clarkson, M.J., Nielsen, C., Ourselin, S., Fox, N. (2011). Automated and consistent brain atrophy estimation using boundary shift integral in longitudinal MRI study.
Ridgway, G.R., Lehmann, M., Rohrer, J., Clarkson, M., Warren, J., Ourselin, S., Fox, N. (2011). Balanced sensitivity and specificity on unbalanced data using support vector machine re-thresholding.