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MENDIONDO GM, GIBBS DJ, SZURMAN-ZUBRZYCKA M, KORN A, MARQUEZ J, SZAREJKO I, MALUSZYNSKI M, KING J, AXCELL B, SMART K, CORBINEAU F and HOLDSWORTH MJ, 2016. Enhanced waterlogging tolerance in barley by manipulation of expression of the N-end rule pathway E3 ligase PROTEOLYSIS6. Plant Biotechnology Journal. 40(1), 40-50 GRAVOT A, RICHARD G, LIME T, LEMARIé S, JUBAULT M, LARIAGON C, LEMOINE J, VICENTE J, ROBERT-SEILANIANTZ A, HOLDSWORTH MJ and MANZANARES-DAULEUX MJ, 2016. Hypoxia response in Arabidopsis roots infected by Plasmodiophora brassicae supports the development of clubroot. BMC plant biology. 16(1), 251 DEKKERS BJ, PEARCE SP, VAN BOLDEREN-VELDKAMP RP, HOLDSWORTH MJ and BENTSINK L, 2016. Dormant and after-Ripened Arabidopsis thaliana Seeds are Distinguished by Early Transcriptional Differences in the Imbibed State. Frontiers in plant science. 7, 1323 GIBBS DJ, BAILEY M, TEDDS HM and HOLDSWORTH MJ, 2016. From start to finish: amino-terminal protein modifications as degradation signals in plants. The New phytologist. 211(4), 1188-94 SHORINOLA O, BIRD N, SIMMONDS J, BERRY S, HENRIKSSON T, JACK P, WERNER P, GERJETS T, SCHOLEFIELD D, BALCáRKOVá B, VALáRIK M, HOLDSWORTH MJ, FLINTHAM J and UAUY C, 2016. The wheat Phs-A1 pre-harvest sprouting resistance locus delays the rate of seed dormancy loss and maps 0.3 cM distal to the PM19 genes in UK germplasm. Journal of experimental botany. 67(14), 4169-78 WILSON, MICHAEL H, HOLMAN, TARA J, SORENSEN, IBEN, CANCHO-SANCHEZ, ESTER, WELLS, DARREN M, SWARUP, RANJAN, KNOX, J PAUL, WILLATS, WILLIAM G T, UBEDA-TOMAS, SUSANA, HOLDSWORTH, MICHAEL, BENNETT, MALCOLM J, VISSENBERG, KRIS and HODGMAN, T CHARLIE, 2015. Multi-omics analysis identifies genes mediating the extension of cell walls in the Arabidopsis thaliana root elongation zone. Frontiers in cell and developmental biology. 3, 10 SCHELER C, WEITBRECHT K, PEARCE SP, HAMPSTEAD A, BüTTNER-MAINIK A, LEE KJD, VOEGELE A, ORACZ K, DEKKERS BJW, WANG X, WOOD ATA, BENTSINK L, KING JR, KNOX JP, HOLDSWORTH MJ, MüLLER K and LEUBNER-METZGER G, 2015. Promotion of testa rupture during garden cress germination involves seed compartment-specific expression and activity of pectin methylesterases. Plant Physiology. 167(1), 200-215 ABBAS M, BERCKHAN S, ROONEY DJ, GIBBS DJ, VICENTE CONDE J, SOUSA CORREIA C, BASSEL GW, MARíN-DE LA ROSA N, LEóN J, ALABADí D, BLáZQUEZ MA and HOLDSWORTH MJ, 2015. Oxygen sensing coordinates photomorphogenesis to facilitate seedling survival. Current biology : CB. 25(11), 1483-8 GIBBS D, VICENTE CONDE J, BERCKHAN S, MENDIONDO GM, PRASAD G and HOLDSWORTH MJ, 2015. Group VII Ethylene Response Factors co-ordinate oxygen and nitric oxide signal transduction and stress responses in plants. Plant Physiology. 169, 23-31 GIBBS DJ, MD ISA N, MOVAHEDI M, LOZANO-JUSTE J, MENDIONDO GM, BERCKHAN S, MARíN-DE LA ROSA N, VICENTE CONDE J, SOUSA CORREIA C, PEARCE SP, BASSEL GW, HAMALI B, TALLOJI P, TOMé DFA, COEGO A, BEYNON J, ALABADí D, BACHMAIR A, LEóN J, GRAY JE, THEODOULOU FL and HOLDSWORTH MJ, 2014. Nitric Oxide Sensing in Plants Is Mediated by Proteolytic Control of Group VII ERF Transcription Factors. Molecular Cell. 53(3), 369-379 MARIN-DE LA ROSA N, SOTILLO B, MISKOLCZI P, GIBBS DJ, VICENTE J, CARBONERO P, ONATE-SANCHEZ L, HOLDSWORTH MJ, BHALERAO R, ALABADI D and BLAZQUEZ MA, 2014. Large-scale identification of gibberellin-related transcription factors defines Group VII ERFs as functional DELLA partners. Plant Physiology. 166, 1022-1032 MENDIONDO GM, MEDHURST A, VAN ROERMUND CW, ZHANG X, DEVONSHIRE J, SCHOLEFIELD D, FERNáNDEZ J, AXCELL B, RAMSAY L, WATERHAM HR, WAUGH R, THEODOULOU FL and HOLDSWORTH MJ, 2014. Barley has two peroxisomal ABC transporters with multiple functions in β-oxidation. Journal of Experimental Botany. 65(17), 4833-4847 BASSEL GW, STAMM P, MOSCA G, BARBIER DE REUILLE P, GIBBS DJ, WINTER R, JANKA A, HOLDSWORTH MJ and SMITH RS, 2014. Mechanical constraints imposed by 3D cellular geometry and arrangement modulate growth patterns in the Arabidopsis embryo. Proceedings of the National Academy of Sciences of the United States of America. 111(23), 8685-90 GIBBS DJ, BACARDIT J, BACHMAIR A and HOLDSWORTH MJ, 2014. The eukaryotic N-end rule pathway: conserved mechanisms and diverse functions. Trends in Cell Biology. 24, 603–611 DEKKERS B.J.W., PEARCE S., VAN BOLDEREN-VELDKAMP R.P., MARSHALL A., WIDERA P., GILBERT J., DROST H., BASSEL G.W., MüLLER K., KING J.R., WOOD A.T.A., GROSSE I., QUINT M., KRASNOGOR N., LEUBNER-METZGER G., HOLDSWORTH M.J. and BENTSINK L., 2013. Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. Plant physiology. 163(1), 205-15 BAILEY-SERRES J., FUKAO T., GIBBS D.J., HOLDSWORTH M.J., LEE S.C., LICAUSI F., PERATA P., VOESENEK L.A.C.J. and VAN DONGEN J.T., 2012. Making Sense Of Low Oxygen Sensing. Trends In Plant Science. 17, 129-138 MIDDLETON A.M., UBEDA-TOMáS S., GRIFFITHS J., HOLMAN T., HEDDEN P., THOMAS S.G., PHILLIPS A.L., HOLDSWORTH M.J., BENNETT M.J., KING J.R. and OWEN M.R., 2012. Mathematical modeling elucidates the role of transcriptional feedback in gibberellin signaling Proceedings of the National Academy of Sciences of the United States of America. 109(19), 7571-7576 GONZALEZ-GUZMAN M, PIZZIO GA, ANTONI R, VERA-SIRERA F, MERILO E, BASSEL GW, FERNáNDEZ MA, HOLDSWORTH MJ, PEREZ-AMADOR MA, KOLLIST H and RODRIGUEZ PL, 2012. Arabidopsis pyr/pyl/rcar receptors play a major role in quantitative regulation of stomatal aperture and transcriptional response to abscisic acid. The Plant Cell. 24(6), 2483-96 LUCAS, M., SWARUP, R., PAPONOV, I.A., SWARUP, K., CASIMIRO, I., LAKE, D., PERET, B., ZAPPALA, S., MAIRHOFER, S., WHITWORTH, M., WANG, J., LJUNG, K. and ET AL, 2011. Short-Root regulates primary, lateral, and adventitious root development in Arabidopsis. Plant Physiology. 155(1), 384-98 BASSEL, G.W., LAN, H., GLAAB, E., GIBBS, D.J., GERJETS, T., KRASNOGOR, N., BONNER, A.J., HOLDSWORTH, M.J. and PROVART, N.J., 2011. Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions Proceedings of the National Academy of Sciences of the United States of America: PNAS. 108(23), 9709-9714 BASSEL, G. W, HOLDSWORTH, M.J and PROVART, N.J., 2011. Seed bioinformatics. Methods in molecular biology (Clifton, N.J.). 773, 403-19 BASSEL, G.W., GLAAB, E., MARQUEZ, J., HOLDSWORTH, M.J. and BACARDIT, J., 2011. Functional network construction in Arabidopsis using rule-based machine learning on large-scale data sets The Plant Cell. 23(9), 3101-3116 GIBBS, D.J., LEE, S.C., ISA, N.M., GRAMUGLIA, .S, FUKAO, T., BASSEL, G.W., CORREIA, C.S., CORBINEAU, F., THEODOULOU, F.L., BAILEY-SERRES, J. and HOLDSWORTH, M.J., 2011. Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants. Nature. 479(7373), 415-418 PEARCE, SP, KING, JR and HOLDSWORTH, MJ, 2011. Axisymmetric Indentation Of Curved Elastic Membranes By A Convex Rigid Indenter International Journal Of Non-Linear Mechanics. 46(9), 1128-1138 DUPEUX, F., SANTIAGO, J., BETZ, K., TWYCROSS, J., PARK, S-Y., RODRIGUEZ, L., GONZALEZ-GUZMAN, M., JENSEN, M.R., KRASNOGOR, N., BLACKLEDGE, M., HOLDSWORTH, M., CUTLER, S.R., RODRIGUEZ, P.L. and MáRQUEZ, J.A., 2011. A thermodynamic switch modulates abscisic acid receptor sensitivity EMBO Journal. 30(20), 4171-4184