French, Andrew - University of Nottingham

研究领域

Image analysis of plants Automating phenotyping approaches (robotics, automated image capture) Developing novel software tools to aid biologists and mathematical modellers

近期论文

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POUND, MICHAEL P.AND FRENCH, ANDREW P.AND FOZARD, JOHN A.AND MURCHIE, ERIK H.AND PRIDMORE, TONY P., 2016. A patch-based approach to 3D plant shoot phenotyping Machine Vision and Applications. 1-13 MICHAEL POUND, ALEXANDRA J BURGESS, MICHAEL H WILSON, JONATHAN A ATKINSON, MARCUS GRIFFITHS, AARON S JACKSON, ADRIAN BULAT, GEORGIOS TZIMIROPOULOS, DARREN M WELLS, ERIK H MURCHIE, TONY P PRIDMORE and ANDREW P FRENCH, 2016. Deep Machine Learning provides state-of-the-art performance in image-based plant phenotyping Biorxiv. Available at: HANNO SCHARR, MASSIMO MINERVINI, ANDREW P. FRENCH, CHRISTIAN KLUKAS, DAVID M. KRAMER, XIAOMING LIU, IMANOL LUENGO, JEAN-MICHEL PAPE, GERRIT POLDER, DANIJELA VUKADINOVIC, XI YIN and SOTIRIOS A. TSAFTARIS, 2016. Leaf segmentation in plant phenotyping: a collation study Machine Vision and Applications. 27(4), 585-606 IMANOL LUENGO, MARK BASHAM and ANDREW P FRENCH, 2016. Fast global interactive volume segmentation with regional supervoxel descriptors In: Proc. SPIE 9784, Medical Imaging 2016: Image Processing, 97842D (March 21, 2016). 9784. IMANOL LUENGO, MARK BASHAM and ANDREW P. FRENCH, 2016. SMURFS: Superpixels from Multi-scale Refinement of Super-regions In: Proceedings of the British Machine Vision Conference 2016. POUND, MICHAEL, FRENCH, ANDREW P. and WELLS, DARREN M., 2015. Quantification of Fluorescent Reporters in Plant Cells PLANT CELL EXPANSION: METHODS AND PROTOCOLS. 1242, 123-131 DEE, HANNAH and FRENCH, ANDREW, 2015. From image processing to computer vision: plant imaging grows up Foreword FUNCTIONAL PLANT BIOLOGY. 42(5), III-V LARRIEU AP, FRENCH AP, PRIDMORE TP, BENNETT MJ and WELLS DM, 2014. Time-profiling fluorescent reporters in the Arabidopsis root. Methods in molecular biology (Clifton, N.J.). 1056, 11-17 BAND L, WELLS DM, FOZARD JA, GHETIU T, FRENCH AP, POUND MP, WILSON MH, YU L, LI W, HIJAZI H, OH J, PEARCE S, PEREZ-AMADOR MA, YUN J, KRAMER E, ALONSO JM, GODIN G, VERNOUX T, HODGMAN TC, PRIDMORE TP, SWARUP R, KING JR and BENNETT MJ, 2014. Systems Analysis of auxin transport in the Arabidopsis root apex Plant Cell. MIGUEL-PACHECO, GIULIANA G., KALER, JASMEET, REMNANT, JOHN, CHEYNE, LYDIA, ABBOTT, CAROLINE, FRENCH, ANDREW P., PRIDMORE, TONY P. and HUXLEY, JONATHAN N., 2014. Behavioural changes in dairy cows with lameness in an automatic milking system Applied Animal Behaviour Science. 150(0), 1-8 LARRIEU, ANTOINE P., FRENCH, ANDREW P., PRIDMORE, TONY P., BENNETT, MALCOLM J. and WELLS, DARREN M., 2014. Time-Profiling Fluorescent Reporters in the Arabidopsis Root PLANT CHEMICAL GENOMICS: METHODS AND PROTOCOLS. 1056, 11-17 POUND, MICHAEL P., FRENCH, ANDREW P., MURCHIE, ERIK H. and PRIDMORE, TONY P., 2014. Automated Recovery of Three-Dimensional Models of Plant Shoots from Multiple Color Images PLANT PHYSIOLOGY. 166(4), 1688-U801 BAND, LEAH R., WELLS, DARREN M., FOZARD, JOHN A., GHETIU, TEODOR, FRENCH, ANDREW P., POUND, MICHAEL P., WILSON, MICHAEL H., YU, LEI, LI, WENDA, HIJAZI, HUSSEIN I., OH, JAESUNG, PEARCE, SIMON P., PEREZ-AMADOR, MIGUEL A., YUN, JEONGA, KRAMER, ERIC, ALONSO, JOSE M., GODIN, CHRISTOPHE, VERNOUX, TEVA, HODGMAN, T. CHARLIE, PRIDMORE, TONY P., SWARUP, RANJAN, KING, JOHN R. and BENNETT, MALCOLM J., 2014. Systems Analysis of Auxin Transport in the Arabidopsis Root Apex PLANT CELL. 26(3), 862-875 ANDREW P FRENCH and MICHAEL P POUND, 2014. Analysis of Root Growth Using Image Analysis. In: S DUTTA GUPTA and YASUOMI IBARAKI, eds., Plant Image Analysis: Fundamentals and Applications CRC Press / Taoylor and Francis. 279-289 MICHAEL P POUND and ANDREW P FRENCH, 2014. An Introduction to Images and Image Analysis. In: S DUTTA GUPTA and YASUOMI IBARAKI, eds., Plant Image Analysis: Fundamentals and Applications CRC Press / Taylor and Francis. POUND MP, FRENCH AP, MURCHIE E and PRIDMORE TP, 2014. Surface reconstruction of plant shoots from multiple views In: European Conference on Computer Vision (ECCV) Workshop on Computer Vision Problems in Plant Phenotyping. MICHAEL P POUND, ANDREW P FRENCH, JONATHAN ATKINSON, DARREN M WELLS, MALCOLM J BENNETT and TONY P PRIDMORE, 2013. RootNav: Navigating images of complex root architectures: http://www.plantphysiol.org/content/162/4/1802.long Plant Physiology. POUND, M.P., FRENCH, A.P., ATKINSON, J.A., WELLS, D.M., BENNETT, M.J. and PRIDMORE, T., 2013. RootNav: navigating images of complex root architectures Plant Physiology. 162(4), 1802-1814 PéRET B, MIDDLETON AM, FRENCH AP, LARRIEU A, BISHOPP A, NJO M, WELLS DM, PORCO S, MELLOR N, BAND LR, CASIMIRO I, KLEINE-VEHN J, VANNESTE S, SAIRANEN I, MALLET R, SANDBERG G, LJUNG K, BEECKMAN T, BENKOVA E, FRIML J, KRAMER E, KING JR, DE SMET I, PRIDMORE T, OWEN M and BENNETT MJ, 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular systems biology. 9, 699 PERET, BENJAMIN, MIDDLETON, ALISTAIR M., FRENCH, ANDREW P., LARRIEU, ANTOINE, BISHOPP, ANTHONY, NJO, MARIA, WELLS, DARREN M., PORCO, SILVANA, MELLOR, NATHAN, BAND, LEAH R., CASIMIRO, ILDA, KLEINE-VEHN, JUERGEN, VANNESTE, STEFFEN, SAIRANEN, ILKKA, MALLET, ROMAIN, SANDBERG, GORAN, LJUNG, KARIN, BEECKMAN, TOM, BENKOVA, EVA, FRIML, JIRI, KRAMER, ERIC, KING, JOHN R., DE SMET, IVE, PRIDMORE, TONY, OWEN, MARKUS and BENNETT, MALCOLM J., 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence MOLECULAR SYSTEMS BIOLOGY. 9, FRENCH AP, WELLS DM, EVERITT N and PRIDMORE TP, 2012. High-Throughput Quantification of Root Growth. In: MANCUSO, S, ed., Measuring Roots: An Updated Approach Heidelberg. xiii, 382 p. BAND. L.R., WELLS, D.M., LARRIEU, A., SUN, J., MIDDLETON, A.M., FRENCH, A.P., BRUNOUD, G., SATO, E.M., WILSON, M.H., PéRET, B., OLIVA, M., SWARUP, R., SAIRANEN, I., PARRY, G., LJUNG, K., BEECKMAN, T., GARIBALDI, J.M., ESTELLE, M., OWEN, M.R., VISSENBERG, K., HODGMAN, T.C., PRIDMORE, T.P., KING, J.R., VERNOUX, T. and BENNETT, M.J., 2012. Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism Proceedings of the National Academy of Sciences of the United States of America. 109(12), 4668-4673 WELLS, D.M., FRENCH, A.P., NAEEM, A., ISHAQ, O., TRAINI, R., HIJAZI, H., BENNETT, M.J. and PRIDMORE, T.P., 2012. Recovering the dynamics of root growth and development using novel image acquisition and analysis methods Philosophical Transactions of the Royal Society B: Biological Sciences. 367(1595), 1517-1524