徐帆 - 北京理工大学 - 前沿交叉科学研究院

个人简介

教育和工作经历 2022-至今，北京理工大学前沿交叉科学研究院，教授，博导，特立青年学者，国家海外高层次青年人才 2021-2022，普渡大学，高级研究助理 2018-2021，普渡大学，博士后研究员 2011-2017，中国科学院计算技术研究所，计算机科学与技术，博士 2007-2011，北京理工大学，计算机科学与技术，学士主持项目国家级青年人才项目北京理工大学特立青年学者项目国家自然科学基金面上项目获奖北京理工大学特立青年学者中国科学院百篇优秀博士论文社会兼职担任Journal of the American Chemical Society、Optics Express、Biomedical Optics Express、Optics Letters、Transactions on Computational Biology and Bioinformatics、BMC Bioinformatics等国际期刊审稿人

研究领域

超分辨显微成像与智能计算机器学习生物信息高性能计算

近期论文

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Shan Gao#; Fan Xu#; Hongjia Li; Fudong Xue; Mingshu Zhang*; Pingyong Xu*; Fa Zhang*; DETECTOR: structural information guided artifact detection for super-resolution fluorescence microscopy image, Biomedical Optics Express, 2021, 12(9): 5751-5769. #Co-first authors. Fan Xu#, Donghan Ma#, Kathryn P MacPherson, Sheng Liu, Ye Bu, Yu Wang, Yu Tang, Cheng Bi, Tim Kwok, Alexander A Chubykin, Peng Yin, Sarah Calve*, Gary E Landreth*, Fang Huang*, Three dimensional nanoscopy of whole cells and tissues with in situ point spread function retrieval, Nature Methods, 2020, 17(5), 531-540. #Co-first authors. Hongjia Li#, Fan Xu#, Shan Gao, Mingshu Zhang, Fudong Xue, Pingyong Xu*, Fa Zhang*, Live-SIMBA: an ImageJ plug-in for the universal and accelerated single molecule-guided Bayesian localization super resolution microscopy (SIMBA) method, Biomedical Optics Express, 2020, 11(10), 5842-5859. #Co-first authors. Sha An#, Karl Ferdinand Ziegler#, Peiyi Zhang, Yu Wang, Tim Kwok, Fan Xu, Cheng Bi, Sandro Matosevic, Peng Yin, Tongcang Li*, Fang Huang*, Axial plane single-molecule super-resolution microscopy of whole cells, Biomedical Optics Express, 2020, 11(1), 461-479, 2020. Mingshu Zhang#, Zhifei Fu#, Changqing Li#, Anyuan Liu, Dingming Peng, Fudong Xue, Wenting He, Shan Gao, Fan Xu, Dan Xu, Ling Yuan, Fa Zhang, Zhiheng Xu, Tao Xu*, Pingyong Xu*, Fast super-resolution imaging technique and immediate early nanostructure capturing by a photoconvertible fluorescent protein, Nano Letter, 2019, 20(4), 2197-2208. Yu Li#, Fan Xu#, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao*, Renmin Han*, DLBI: deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy, Bioinformatics, 2018, 34(13), 284-294. #Co-first authors. Fudong Xue, Wenting He, Fan Xu, Mingshu Zhang, Liangyi Chen, Pingyong Xu, Hessian single-molecule localization microscopy using sCMOS camera, Biophysics Reports, 2018, 4(4), 215-221. Fan Xu#, Mingshu Zhang#, Wenting He, Renmin Han, Fudong Xue, Zhiyong Liu, Fa Zhang*, Jennifer Lippincott-Schwartz*, Pingyong Xu*, Live cell single molecule-guided Bayesian localization super resolution microscopy, Cell Research, 2017, 27(5), 713-716, (highlighted in Nature Methods). #Co-first authors. Fan Xu, Mingshu Zhang, Zhiyong Liu, Pingyong Xu*, Fa Zhang*, Bayesian localization microscopy based on intensity distribution of fluorophores, Protein & cell, 2015, 6(3), 211-220. Renmin Han, Liansan Wang, Fan Xu, Yongdeng Zhang, Mingshu Zhang, Zhiyong Liu, Fei Ren*, Fa Zhang*, Drift correction for singlemolecule imaging by molecular constraint field, a distance minimum metric, BMC Biophysics, 2015, 8(1), 1. Gongming Wang*, Fan Xu, Precise improvement of ISAF reconstruction algorithm based on the computational radius of density function, Bio-medical materials and engineering, 2014, 24(6), 3787-3795. Fan Xu, Fa Zhang, Xiang Chen, Zhiyong Liu, A siRNA prediction method combining sequence and secondary, International Symposium on Bioinformatics Research and Applications (ISBRA2013), North Carolina, U.S., May 2013.