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Chen Jian#*, Zhang Xiangbo#, Yi Fei, Gao Xiang, Song Weibin, Zhao Haiming, Lai Jinsheng*. MP3RNA-seq: Massively parallel 3'end RNA sequencing for high-throughput gene expression profiling and genotyping. Journal of Integrative Plant Biology, 2021, DOI: 10.1111/jipb.13077.
Fei Yi, Wei Gu, Jianfang Li, Chen Jian, Hu Li, Cui Yang, Zhao Haiming, Guo Yan, Lai Jinsheng Lai, Song Weibin*. Miniature seed6, encoding an endoplasmic reticulum signal peptidase, is critical in seed development. Plant Physiology, 2020, DOI: 10.1093/plphys/kiaa060.
Zhao Yingwen, Wang Jun, Chen Jian, Zhang Xiangliang, Guo Maozu*, Yu Guoxian*. A literature review of gene function prediction by modeling gene ontology. Frontiers in Genetics, 2020, 11: 400
Yi Fei#, Gu Wei#, Chen Jian, Song Ning, Gao Xiang, Zhang Xiangbo, Zhou Yingsi, Ma Xuxu, Song Weibin, Zhao Haiming, Eddi Esteban, Asher Pasha, Nicholas J. Provart, Lai Jinsheng*. High temporal-resolution transcriptome landscape of early maize seed development, Plant Cell, 2019, 31(5): 974-992.
Sun Silong#, Zhou Yingsi#, Chen Jian#, Shi Junpeng#, Zhao Haiming#, Zhao Hainan, Song Weibin, Zhang Mei, Cui Yang, Dong Xiaomei, Liu Han, Ma Xuxu, Jiao Yinping, Wang Bo, Wei Xuehong, Joshua C. Stein, Jeff C. Glaubitz, Lu Fei, Yu Guoliang, Liang Chengzhi, Kevin Fengler Li Bailin, Antoni Rafalski, Patrick S. Schnable, ?Doreen H. Ware, Edward S. Buckler?, Lai Jinsheng*. Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes., Nature Genetics, 2018, 50(9):1289-1295.
Dong Xiaomei#, Chen Jian#, Li Tong#, Li En, Zhang Xiangbo, Zhang Mei, Song Weibin, Zhao Haiming, Lai Jinsheng*. Parent-of-origin-dependent nucleosome organization correlates with genomic imprinting in maize. Genome Research, 2018, 28: 1-9.
Chen Jian#, Li En#, Zhang Xiangbo, Dong Xiaomei, Lei Lei, Song Weibin, Zhao Haiming, Lai Jinsheng*. Genome-wide nucleosome occupancy and organization modulates the plasticity of gene transcriptional status in maize. Molecular Plant, 2017, 10: 962-974.
Chen Jian#, Li En#, Lai Jinsheng*. The coupled effect of nucleosome organization on gene transcription level and transcriptional plasticity. Nucleus, 2017, 8(6): 605-612.
Dong Xiaomei#, Zhang Mei#, Chen Jian#, Peng Lizeng, Zhang Nan, Wang Xin, Lai Jinsheng*. Dynamic and antagonistic allele-specific epigenetic modifications controlling the expression of imprinted genes in maize endosperm, Molecular Plant, 2016, 10: 442-455.
Lei Lei., Shi Junpeng., Chen Jian., Zhang Mei, Sun Silong, Xie Shaojun, Li Xiaojie, Zeng Biao, Peng Lizeng, Hauck Andrew, Song Weibin, Fan Zaifeng, and Lai Jinsheng. (2015). Ribosome profiling reveals dynamic translational landscape in maize seedlings under drought stress. The Plant Journal, 2015, 84,1206-1218.
Yi Fei., Chen Jian, and Yu Jingjuan. Global analysis of uncapped mRNA changes under drought stress and microRNA-dependent endonucleolytic cleavages in foxtail millet. BMC Plant Biology, 2015, 15, 1-15.
Chen Jian*, Zeng Biao, Zhang Mei, Xie Shaojun, Wang Gaokui., Hauck Andrew, and Lai Jinsheng. Dynamic transcriptome landscape of maize embryo and endosperm development. Plant Physiology, 2014, 166, 252-264.
Zhang Mei, Xie Shaojun., Dong Xiaomei, Zhao Xin., Zeng Biao, Chen Jian, Li Hui, Yang Weilong, Zhao Hainan, Wang Gaokui, Chen Zongliang, Sun Ssilong, Hauck Andrew, Jin Weiwei, and Lai Jinsheng. Genome-wide high resolution parental-specific DNA and histone methylation maps uncover patterns of imprinting regulation in maize. Genome Research, 2014, 24, 167-176.
Zhang Mei, Zhao Hainan, Xie Shaojun, Chen Jian, Xu Yuanyuan, Wang Keke, Zhao Haiming, Guan Haiying, Hu Xiaojiao, Jiao Yinping, Song Weibin, and Lai Jinsheng. Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm. Proceedings of the National Academy of Sciences, 2011, 108, 20042-20047.
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