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Jing Chen#, Qun Zhao#*, Hang Gao, Lili Zhao, Huiying Chu, Yichu Shan, Zhen Liang, Yukui Zhang, Lihua Zhang*, A Glycosidic-Bond-Based Mass-Spectrometry-Cleavable Cross-linker Enables In Vivo Cross-linking for Protein Complex Analysis, Angewandte Chemie International Edition, 2023, 62: e202212860.
Beirong Zhang#, Zhou Gong#*, Lili Zhao, Yuxin An, Hang Gao, Jing Chen, Zhen Liang, Maili Liu, Yukui Zhang, Qun Zhao,* and Lihua Zhang*, Decoding Protein Dynamics in Cells Using Chemical Cross-Linking and Hierarchical Analysis. Angewandte Chemie International Edition, 2023, e202301345.
Yuwan Chen, Wen Zhou, Yufei Xia, Weijie Zhang, Qun Zhao, Xinwei Li, Hang Gao, Zhen Liang, Guanghui Ma, Kaiguang Yang*, Lihua Zhang*, Yukui Zhang, Targeted cross-linker delivery for the in situ mapping of protein conformations and interactions in mitochondria, Nature Communications, 2023, 14: 3882.
Baofu Ma, Jianyu Han, Qun Zhao, Bo Jiang, Zhixin Zhang*, Baofeng Zhao*, Zhen Liang, Yukui Zhang, Lihua Zhang*, Platinum Engineering on Nanoceria Surface toward High Catalytic Activity for Inducing Tumor Cell Apoptosis and Inhibiting Migration, Acs Sustainable Chemistry & Engineering, 2023, 11: 6163-6172.
Xinwei Li, Yuwan Chen, Jing Jiang, Wen Zhou, Hang Gao, Qun Zhao, Zhen Liang, Xupeng Cao*, Kaiguang Yang*, Lihua Zhang*, and Yukui Zhang, Crosslinker Nanocarriers Delivery to Chloroplasts for In Vivo Mapping of Photosynthetic Membrane Protein Complexes in Living Chlamydomonas reinhardtii Cells, Analytical Chemistry, 2023, 95: 9555-9563.
Beirong Zhang, Hang Gao, Zhou Gong, Lili Zhao, Bowen Zhong, Zhigang Sui, Zhen Liang, Yukui Zhang, Qun Zhao*, and Lihua Zhang*, Improved Cross-Linking Coverage for Protein Complexes Containing Low Levels of Lysine by Using an Enrichable Photo-Cross-Linker, Analytical Chemistry, 2023, 95: 9445-9452.
Li Guan*, Yanyan Zhou, Xiao Li, Yongbao Mao, Anyang Li, Yile Fu, Wen Liu, Sheying Dong, Zhen Liang, Yukui Zhang, Qun Zhao*, and Lihua Zhang*, ON-OFF Fluorescent Cyanine Dye Based on a Benzothiophenyl Rotor Enables Selective Illumination of G-Quadruplexes in Mitochondria, Analytical Chemistry, 2023, 95: 9288-9296.
Bowen Zhong, Yuxin An, Hang Gao, Lili Zhao, Xiao Li, Zhen Liang, Yukui Zhang, Qun Zhao*, Lihua Zhang*, In vivo cross-linking-based affinity purification and mass spectrometry for targeting intracellular protein-protein interactions, Analytica Chimica Acta, 2023, 1265: 341273.
Zuoling Wen, Yuebin Zhang, Beirong Zhang, Yumo Hang, Li Xu, Yangsheng Chen, Qunhui Xie, Qun Zhao, Lihua Zhang, Guohui Li, Bin Zhao, Fei Sun*, Yujia Zhai*, Yun Zhu*, Cryo-EM structure of the cytosolic AhR complex, Structure, 2023, 31: 295-308.
Huan Feng#, Qun Zhao#, Beirong Zhang, Hang Hu, Meng Liu, Kaifeng Wu, Xiaosong Li, Xin Zhang*, Lihua Zhang*, Yu Liu*, Enabling Photo-Crosslinking and Photo-Sensitizing Properties for Synthetic Fluorescent Protein Chromophores. Angewandte Chemie International Edition, 2022, e202215215.
Shen Chen#, Liping Chen#, Lizhu Ye#, Yue Jiang, Qiong Li, Haiyan Zhang, Rui Zhang, Huiyao Li, Dianke Yu, Rong Zhang, Yujie Niu, Qun Zhao, Jianhui Liu, Gangfeng Ouyang, Michael Aschnerf, Yuxin Zheng, Lihua Zhang, Wen Chen*, Daochuan Li*, PP2A-mTOR-p70S6K/4E-BP1 Axis Regulates M1 Polarization of Pulmonary Macrophages and Promotes Ambient Particulate Matter Induced Mouse Lung Injury, Journal of Hazardous Materials, 2022, 424: 127624.
Hongwei Chu#, Qun Zhao#, Ju Liu, Kaiguang Yang, Yanlei Wang, Jianhui Liu, Kun Zhang, Baofeng Zhao*, Hongyan He*, Yong Zheng, Shijun Zhong, Zhen Liang, Lihua Zhang*, Yukui Zhang, Ionic Liquid-Based Extraction System for In-Depth Analysis of Membrane Protein Complexes, Analytical Chemistry, 2022, 94: 758-767.
Yuxin An, Qun Zhao*, Hang Gao, Lili Zhao, Xiao Li, Xiaodan Zhang, Zhen Liang, Lihua Zhang*, Yukui Zhang, Selective Removal of Unhydrolyzed Monolinked Peptides from Enriched Crosslinked Peptides To Improve the Coverage of Protein Complex Analysis, Analytical Chemistry, 2022, 94: 3904-3913.
Hongwei Chu#, Qun Zhao*#, Yichu Shan#, Shen Zhang, Zhigang Sui, Xiao Li, Fei Fang, Baofeng Zhao*, Shijun Zhong, Zhen Liang, Lihua Zhang*, Yukui Zhang, All-Ion Monitoring-Directed Low-Abundance Protein QuantificationReveals CALB2 as a Key Promoter in Hepatocellular CarcinomaMetastasis, Analytical Chemistry, 2022, 94: 6102-6111.
Hang Gao, Lili Zhao, Bowen Zhong, Beirong Zhang, Zhou Gong, Baofeng Zhao, Yi Liu, Qun Zhao*, Lihua Zhang*, Yukui Zhang, In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker, Analytical Chemistry, 2022, 94: 7551-7558.
Yuxin An, Qun Zhao*, Zhou Gong, Lili Zhao, Yi Li, Zhen Liang, Peng Zou, Yukui Zhang, Lihua Zhang*, Suborganelle-Specific Protein Complex Analysis Enabled by in Vivo Cross-Linking Coupled with Proximal Labeling, Analytical Chemistry, 2022, 94: 12051-12059.
Hang Gao, Qun Zhao*, Zhou Gong, Bowen Zhong, Jing Chen, Zhigang Sui, Xiao Li, Zhen Liang, Yukui Zhang, Lihua Zhang*, Alkynyl-Enrichable Carboxyl-Selective Crosslinkers to Increase the Crosslinking Coverage for Deciphering Protein Structures, Analytical Chemistry, 2022, 94: 12398-12406.
Di Shen#, Wenhan Jin#, Qun Zhao#, Mengdie Wang, Beirong Zhang, Huan Feng, Wang Wan, Yulong Bai, Haochen Lyu, Jialu Sun, Lihua Zhang*, and Yu Liu*, Covalent Solvatochromic Proteome Stress Sensor Based on the Schiff Base Reaction, Analytical Chemistry, 2022, 94: 14143-14150.
Yuwen Chen#, Yuxin An#, Zhongpeng Dai, Yi Liu, Zhen Liang, Qun Zhao*, Lihua Zhang*, Yukui Zhang, Highly Selective Enrichment of Surface Proteins from Living Cells by Photo-crosslinking Probe Enabled In-depth Analysis of Surfaceome, Analytica Chimica Acta, 2022, 1203: 339694.
Lili Zhao#, Bowen Zhong#, Yuxin An, Weijie Zhang, Hang Gao, Xiaodan Zhang, Zhen Liang, Yukui Zhang, Qun Zhao*, Lihua Zhang*, Enhanced protein–protein interaction network construction promoted by in vivo cross-linking with acid-cleavable click-chemistry enrichment, Frontiers in Chemistry, 2022, 10: 994572.
Liping Chen#, Ping Guo#, Wenxue Li#, Xinhang Jiang, Qun Zhao, Daochuan Li, Qing Wang, Yongmei Xiao, Xiumei Xing, Yaqin Pang, Michael Aschner, Lihua Zhang*, Wen Chen*, Protein Phosphatase 2A Regulates Cytotoxicity and Drug Resistance by Dephosphorylating AHR and MDR1, Journal of Biological Chemistry, 2022, 298: 101918.
Wang Wan#, Qun Zhao#, Biao Jing#, Congcong Peng, Mengdie Wang, Yanan Huang, Wenhan Jin, Bowen Zhong, Zhenduo Zhang, Xuepeng Dong, Zhenming Gao*, Lihua Zhang*, Yu Liu*, Interrogating the impact of aggregation-induced emission nanoparticles on in vitro protein stability, ex vivo protein homeostasis, and in vivo biocompatibility, AGGREGATE, 2022, e274.
Lili Zhao, Zhou Gong, Qun Zhao*, Lihua Zhang*, Yukui Zhang, Deciphering In-vivo Cross-linking Mass Spectrometry Data for Dynamic Protein Structure Analysis, Chemical Research in Chinese Universities, 2022, 38: 758-762.
Liping Chen#, Ping Guo#, Wenxue Li#, Fei Fang#, Wei Zhu, Junling Fan, Fangping Wang, Yuanyuan Gao, Qun Zhao, Qing Wang, Yongmei Xiao, Xiumei Xing, Daochuan Li, Tieliu Shi, Dianke Yu, Michael Aschner, Lihua Zhang*, Wen Chen*, Perturbation of Specific Signaling Pathways Is Involved in Initiation of Mouse Liver Fibrosis, Hepatology, 2021, 73: 1551-1569.
Wang Wan, Yanan Huang, Qiuxuan Xia, Yulong Bai, Yuwen Chen, Wenhan Jin, Mengdie Wang, Di Shen, Haochen Lyu, Yuqi Tang, Xuepeng Dong, Zhenming Gao, Qun Zhao, Lihua Zhang, Yu Liu*, Covalent Probes for Aggregated Protein Imaging via Michael Addition，Angewandte Chemie-International Edition, 2021, 60: 11335-11343.
Hongwei Chu, Changqing Wu, Qun Zhao, Rui Sun, Kuo Yang, Baofeng Zhao*, Yang Liu, Zhen Liang, Shijun Zhong, Lihua Zhang*, Yukui Zhang, Quantitative Proteomics Identifies FOLR1 to Drive Sorafenib Resistance via Activating Autophagy in Hepatocellular Carcinoma Cells, Carcinogenesis, 2021, 42: 753-761.
Lili Zhao, Qun Zhao*, Yichu Shan, Fei Fang, Weijie Zhang, Baofeng Zhao, Xiao Li, Zhen Liang, Lihua Zhang*, Yukui Zhang, Smart Cutter: An Efficient Strategy for Increasing the Coverage of Chemical Cross-Linking Analysis, Analytical Chemistry, 2020, 92: 1097-1105.
Fei Fang, Qun Zhao, Huiying Chu, Mingwei Liu, Baofeng Zhao, Zhen Liang, Lihua Zhang*, Guohui Li*, Liming Wang, Jun Qin, Yukui Zhang, Molecular Dynamics Simulation-assisted Ionic Liquid Screening for Deep Coverage Proteome Analysis, Molecular & Cellular Proteomics, 2020, 19: 1724-1737.
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