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Stanislav M. Avdoshenko, Sai Sriharsha M. Konda, and Dmitrii E. Makarov, On the calculation of internal forces in mechanically stressed polyatomic molecules, J. Chem. Phys. 141, 134115 (2014). Ignacia Echeverria, Dmitrii E. Makarov, and Garegin A. Papoian, Concerted Dihedral Rotations Give Rise to Internal Friction in Unfolded Proteins, JACS 236 (2014) 8708-8713, DOI: 10.1021/ja503069k Sai Sriharsha M. Konda, Stanislav M. Avdoshenko, and Dmitrii E. Makarov, Exploring the topography of the stress-modified energy landscapes of mechanosensitive molecules, J. Chem. Phys. 140, 104114 (2014) Dmitrii E. Makarov, Computational and Theoretical Insights into Protein Translocation, Protein & Peptide Letters, 21 (2014), 217-226 Ronald M. Levy, Wei Dai, Nan-jie Deng and Dmitrii E. Makarov, How long does it take to equilibrate the unfolded state of a protein?, PROTEIN SCIENCE, 22, 1459-1465 (2013) (DOI: 10.1002/pro.2335) Sai Sriharsha M. Konda, Johnathan N. Brantley, Bibin T. Varghese, Kelly M. Wiggins,, Christopher W. Bielawski, and Dmitrii E. Makarov, Molecular Catch Bonds and anti-Hammond Effect in Polymer Mechanochemistry, the Journal of the American Chemical Society, 135 (2013), 12722-12729 Alexander T. Hawk, Sai Sriharsha M. Konda, and Dmitrii E. Makarov, Computation of transit times using the milestoning method with applications to polymer translocation, J. Chem. Phys., 139 (2013), 064101 Takanori Uzawa, Takashi Isoshima, Yoshihiro Ito, Koichiro Ishimori, Dmitrii E. Makarov, and Kevin W. Plaxco, Sequence and Temperature Dependence of the End-to-End Collision Dynamics of Single-Stranded DNA, Biophys. Journal 104 (2013), 2485-2492 Ryan R. Cheng, Alexander T. Hawk, and Dmitrii E. Makarov, Exploring the role of internal friction in the dynamics of unfolded proteins using simple polymer models, J. Chem. Phys. 138, 074112 (2013). Dmitrii E. Makarov, Interplay of non-Markov and internal friction effects in the barrier crossing kinetics of unfolded proteins, J. Chem. Phys. 138, 014102 (2013). Johnathan N. Brantley, Sai S.M. Konda, Dmitrii E. Makarov and Christopher W. Bielawski, Regiochemical Effects on Molecular Stability: A Mechanochemical Evaluation of 1,4- and 1,5-Disubstituted Triazoles, J. Am. Chem. Soc., 2012, 134 (24), 9882–9885/ Herschel M. Watkins, Alexis Vallée-Bélisle, Francesco Ricci, Dmitrii E. Makarov, and Kevin W. Plaxco, Entropic and Electrostatic Effects on the Folding Free Energy of a Surface-Attached Biomolecule: An Experimental and Theoretical Study, JACS (2012) 134(4) 2120-2126. James A. Madsen, Ryan R. Cheng, Dmitrii E. Makarov, and Jennifer S. Brodbelt, Charge-site dependent dissociation of hydrogen-rich radical peptide cations upon vacuum UV photoexcitation, Chem. Eur. J., 18 (2012), 5374-5383. Andrea Soranno, Brigitte Buchli, Daniel Nettels, Sonja Müller-Späth, Ryan R. Cheng, Shawn H. Pfeil, Armin Hoffmann, Everett A. Lipman, Dmitrii E. Makarov, Benjamin Schuler, Quantifying internal friction in unfolded and intrinsically disordered proteins with single molecule spectroscopy, Proc. Nat. Acad. Sci 109 (2012) 17800–17806.