吴玉峰 - 南京农业大学

个人简介

吴玉峰，2008于中国科学院遗传与发育生物学研究所获遗传学博士学位。2008-2014作为博士后/研究科学家在美国威斯康辛大学-麦迪逊分校工作。现任南京农业大学生物信息中心主任、作物遗传与种质创新国家重点实验室教授。热忱欢迎对生物信息学、表观基因组学感兴趣，具有植物生物学、生化与分子生物学背景或统计与计算机良好基础的同学报考博士、硕士研究生！

研究领域

主要从事植物表观组学、基因组信息学研究，通过基于高通量测序技术的生物信息学研究，从DNA、RNA及染色质修饰等不同层次，探索植物生长发育以及作物重要农艺性状相关的表观遗传学机制。

近期论文

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Zhu, D., Mao, F., Tian, Y., Lin, X., Gu, L., Gu, H., Qu, Lj., Wu, Y., and Wu, Z. (2020). The features and regulation of co-transcriptional splicing in arabidopsis. Molecular Plant 13, 278-294. Liu S, Xue C, Fang Y, Chen G, Peng X, Zhou Y, Chen C, Liu G, Gu M, Wang K, Zhang W, Wu Y, Gong Z. (2018). Global involvement of lysine crotonylation in protein modification and transcription regulation in rice. Mol Cell Proteomics 17, 1922-1936. Zhao, H., Zhang, W., Chen, L., Wang, L., Marand, A.P., Wu, Y., and Jiang, J. (2018). Proliferation of Regulatory DNA Elements Derived from Transposable Elements in the Maize Genome. Plant Physiol 176, 2789-2803. Wu, Y.F., Zhang, W.L., and Jiang, J.M. (2014). Genome-wide nucleosome positioning is orchestrated by genomic regions associated with dnase i hypersensitivity in rice. PLoS Genet 10, e1004378. Wang, K.*, Wu, Y.F.*, Zhang, W.L., Dawe, R.K., and Jiang, J.M. (2014). Maize centromeres expand and adopt a uniform size in the genetic background of oat. Genome Res 24, 107-116. Zhang, H.Q., Koblizkova, A., Wang, K., Gong, Z.Y., Oliveira, L., Torres, G.A., Wu, Y.F., Zhang, W.L., Novak, P., Buell, C.R., Macas, J., and Jiang, J.M. (2014). Boom-bust turnovers of megabase-sized centromeric DNA in solanum species: Rapid evolution of DNA sequences associated with centromeres. Plant Cell 26, 1436-1447. Zhang, W.L., Zhang, T., Wu, Y.F., and Jiang, J.M. (2014). Open chromatin in plant genomes. Cytogenet Genome Res 143, 18-27. Duangpan, S., Zhang, W.L., Wu, Y.F., Jansky, S.H., and Jiang, J.M. (2013). Insertional mutagenesis using tnt1 retrotransposon in potato. Plant Physiol 163, 21-29. Zhang, T., Talbert, P.B., Zhang, W.L., Wu, Y.F., Yang, Z.J., Henikoff, J.G., Henikoff, S., and Jiang, J.M. (2013). The cento satellite confers translational and rotational phasing on cenh3 nucleosomes in rice centromeres. P Natl Acad Sci USA 110, E4875-E4883. Gong, Z.Y., Wu, Y.F., Koblizkova, A., Torres, G.A., Wang, K., Iovene, M., Neumann, P., Zhang, W.L., Novak, P., Buell, C.R., Macas, J., and Jiang, J.M. (2012). Repeatless and repeat-based centromeres in potato: Implications for centromere evolution. Plant Cell 24, 3559-3574. Zhang, W.L.*, Wu, Y.F.*, Schnable, J.C., Zeng, Z.X., Freeling, M., Crawford, G.E., and Jiang, J.M. (2012). High-resolution mapping of open chromatin in the rice genome. Genome Res 22, 151-162. Zhang, W.L.*, Zhang, T.*, Wu, Y.F.*, and Jiang, J.M. (2012). Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in arabidopsis. Plant Cell 24, 2719-2731. Wu, Y.F., Kikuchi, S., Yan, H.H., Zhang, W.L., Rosenbaum, H., Iniguez, A.L., and Jiang, J.M. (2011). Euchromatic subdomains in rice centromeres are associated with genes and transcription. Plant Cell 23, 4054-4064. Yan, H.H., Kikuchi, S., Neumann, P., Zhang, W.L., Wu, Y.F., Chen, F., and Jiang, J.M. (2010). Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice. Plant J. 63, 353-365. Hirsch, C.D., Wu, Y.F., Yan, H.H., and Jiang, J.M. (2009). Lineage-specific adaptive evolution of the centromeric protein cenh3 in diploid and allotetraploid oryza species. Mol Biol Evol 26, 2877-2885. Wu, Y.F., Zhu, Z.G., Ma, L.G., and Chen, M.S. (2008). The preferential retention of starch synthesis genes reveals the impact of whole-genome duplication on grass evolution. Mol Biol Evol 25, 1003-1006.