Whitby, Corinne - University of Essex - School of Biological Sciences

个人简介

Posts and Training: 1997-2002 PostDoctoral Research Fellow, University of Liverpool 2002-2003 PostDoctoral Research Fellow, University of Aberdeen 2003-2005 PostDoctoral Research Fellow, University of Exeter 2006-2012 Lecturer in Environmental Microbiology, University of Essex 2012-Present Senior Lecturer in Environmental Microbiology, University of Essex September 2011- March 2012 Royal Society Visiting Fellow University of Calgary, University of Alberta, Canada

研究领域

My research is focussed on the following areas: 1. Microbial nitrogen and carbon cycling. 2. Microbial biodegradation of hydrocarbons with a specific focus on naphthenic acid (NA) biodegradation in aquatic and terrestrial environments. 3. Impact of nanoparticles on microbial communities in the environment. 4. Characterization of microbial communities in bioaerosols. I am currently PI on several research grants including a BBSRC-CASE project 'Using synthetic biology to forward engineer catabolic pathways in Psudomonads for use as biotechnological tools in the bioremediation of oil sands process waters, a NERC-CASE project to analyse plant-microbial interactions in the soil rhizosphere, a NERC-CASE project with Forest Research to analyse the ‘Spatio-temporal dynamics of microbial community structure and function across an afforestation chronosequence’ and a NERC-funded project with industry to develop a Process Scale-up for Rapid Naphthenic Acid Removal from Oil sands Process Waters (OSPW). I am also Co-I on a NERC funded project to investigate ‘The role of lateral exchange in modulating the seaward flux of C, N, P’, and Co-I on an EU-funded project for FrameWork 7 (FP7) to measure ‘Human Exposure to Aeorosol Contaminants in Modern Microenvironments (HEXACOMM)’ and Co-I on a NERC-funded grant to develop 'Rapid monitoring of bioaerosols in industrial, agricultural and urban environments'.

近期论文

查看导师最新文章（温馨提示：请注意重名现象，建议点开原文通过作者单位确认）

Beddow J, Stolpe B, Cole PA, Lead JR, Sapp M, Lyons BP, Colbeck I, Whitby C* (2016). Nanosilver inhibits nitrification and reduces ammonia-oxidizing bacterial but not archaeal amoA gene abundance in estuarine sediments. Environmental Microbiology (in press). Lansdown K, McKew BA, Whitby C, Dumbrell AJ, Heppell CM, Binley A, Olde, L, Trimmer M (2016). Importance and controls of anaerobic ammonium oxidation influenced by riverbed geology. Nature Geosciences (doi:10.1038/ngeo2684). Folwell BD, McGenity TJ, Whitby C* (2016). Characterisation of biofilm and planktonic bacterial and fungal communities transforming high molecular weight polyaromatic hydrocarbons. Appl. Environ. Microbiol. (doi:10.1128/AEM.03713-15). Beddow J, Johnson RJ, Lawson T, Breckels MN, Webster RJ, Smith BE, Rowland SJ, Whitby C* (2016). The effect of oil sands process-affected water and model naphthenic acids on photosynthesis and growth in Emiliania huxlyei and Chlorella vulgaris. Chemosphere 145: 416-423. Tatti E, McKew BA, Whitby C, Smith CJ (2016). Simultaneous DNA-RNA extraction from coastal sediments and quantification of 16S rRNA genes and transcripts by real-time PCR. JoVE (in press). Smith CJ, McKew BA, Whitby C* (2016). Primers-functional genes for nitrogen-cycling microbes in oil reservoirs. In: Hydrocarbon and Lipid Microbiology protocols (Springer protocols Handbooks) Ed: McGenity, TJ, Timmis KN, Nogales B. (in press). Folwell BD, McGenity TJ, Price A, Johnson RJ, Whitby C* (2015). Exploring the capacity for anaerobic biodegradation of polycyclic aromatic hydrocarbons and naphthenic acids by microbes from oil-sands process affected waters. Int. J. Biodeterioration & Biodegradation (doi:10.1016/j.ibiod.2014.12.016). Li J, Nedwell DB, Beddow J, Dumbrell AJ, McKew BA, Thorpe EL, Whitby C* (2015). amoA gene abundances and nitrification potential rates suggest that benthic ammonia-oxidizing bacteria (AOB) not archaea (AOA) dominate N cycling in the Colne estuary, UK. Appl. Environ. Microbiol. 81: 159-165. Beddow J, Stolpe B, Cole, PA, Lead JR, Sapp MS, Lyons BP, McKew, BA, Steinke, M, Benyahia F, Colbeck I, Whitby C* (2014). Estuarine sediment hydrocarbon-degrading microbial communities demonstrate resilience to nanosilver. Int. J. Biodeterioration & Biodegradation. 96:206-215. Papaspyrou, S, Smith, CJ, Dong, LF, Whitby, C, Dumbrell, AJ, Nedwell, DB (2014). Nitrate reduction functional genes and nitrate reduction potentials persist in deeper estuarine sediments. Why? PLOS ONE, 9 (4): 1-13. Beddow, J, Stolpe, B, Cole, PA, Lead, JR, Sapp, M, Lyons, B, Colbeck, I, Whitby, C* (2014). Effects of engineered silver nanoparticles on the growth and activity of ecologically important microbes. Environmental Microbiology Reports. 6:448-458. Johnson, RJ, Smith, BE, Rowland SJ, Whitby, C* (2013). Biodegradation of alkyl branched aromatic alkanoic naphthenic acids by Pseudomonas putida KT2440. International Journal of Biodeterioration and Biodegradation 81: 3-8. McKew, B, Dumbrell, AJ, Daud, SD, Hepburn, L, Thorpe, E, Morgensen, L, Whitby, C* (2012). Characterization of geographically distinct bacterial communities associated with the coral mucus from Acropora spp. and Porites spp. Appl. Environ. Microbiol. 78: 5229-5237. Johnson, RJ, West, C, Swaih, AM, Folwell, BD, Smith, BE, Rowland SJ, Whitby, C* (2012). Aerobic biotransformation of alkyl branched aromatic alkanoic naphthenic acids via two different pathways by a new isolate of Mycobacterium. Environmental Microbiology, 14: 872-882. Pankhurst, L, Whitby, C, Pawlett, M, Larcombe, L, McKew, BA, Deacon, L, Morgan, S, Villa, R, Drew, G, Tyrrel, S, Pollard, S, Coulon, F (2012). Temporal and spatial changes of the microbial bioaerosol communities in green-waste composting. FEMS Microbiololgy Ecology, 79: 229-239. Rowland, SJ, Jones, D, Scarlett, AG, West, CE, Hin, LP, Boberek, M, Tonkin, A, Smith, BE, Whitby, C* (2011). Synthesis and toxicity of some metabolites of the microbial degradation of synthetic naphthenic acids. Science of the Total Environment. 409: 2936-2941. Whitby, C*, Skovhus, T (2011). Applied Microbiology and Molecular Biology in Oil Field Systems. C. Whitby, T.L. Skovhus (eds.) Springer, Berlin. Price, A, Alvarez, LA, Whitby, C, & Larsen, J (2011). How many microorganisms are present? Quantitative reverse transcription PCR (qRT-PCR). In: Applied Microbiology and Molecular Biology in Oil Field Systems. C. Whitby, T.L. Skovhus (eds.) Springer, Berlin. Johnson, R, Smith, BE, Sutton, P, McGenity, TJ, Rowland, SJ, Whitby, C*. (2010). Microbial biodegradation of aromatic alkanoic naphthenic acids is affected by the degree of alkyl side chain branching. Isme Journal. 5: 486-496. Price, A, Alvarez, LA, Whitby, C, Larsen, J (2010). Detection of SRP activity by quantification of mRNA for the dissimilatory (bi) sulfite reductase gene (dsrA) by reverse transcription quantitative PCR. NACE- International Corrosion Series.