Teif, Vladimir - University of Essex - School of Biological Sciences

个人简介

2015 - current: Lecturer. University of Essex, School of Biological Sciences 2008 – 2015: German Cancer Research Center (DKFZ) and BioQuant, Heidelberg 2011 – 2015: BIOMS Fellowship 2009 – 2011: Fellow of the Cellnetworks Cluster of Excellence 2008 – 2009: DKFZ Guest Scientist, Group of Prof. Karsten Rippe 2004 – 2008: Belarus National Academy of Sciences, Minsk, Belarus 2009 – 2010: Senior Scientist 2004 – 2008: Research Scientist

研究领域

Modelling epigenetic regulation Next Generation Sequencing Biophysics of chromatin DNA-protein binding Cell differentiation Cancer transition Lattice models

近期论文

查看导师新发文章（温馨提示：请注意重名现象，建议点开原文通过作者单位确认）

Teif V.B and Cherstvy A.G. (2016). Chromatin and epigenetics: current biophysical views. AIMS Biophysics 3, 88-98 | Open access article | PDF Teif V.B. (2016). Nucleosome positioning: resources and tools online. Briefings in Bioinformatics. DOI: 10.1093/bib/bbv086 | Advance Access Online | Author's PDF Teif V.B., Kepper N., Yserentant K., Wedemann G., Rippe K. (2015). Affinity, stoichiometry and cooperativity of heterochromatin protein 1 (HP1) binding to nucleosomal arrays. J. Phys.: Condens. Matter 27, 064110 | PDF | Salih B., Teif V.B., Tripathi V., Trifonov E.N. (2015) Strong nucleosomes of mouse genome in recovered centromeric sequences. J. Biomol. Struct. Dynam. 33, 1164-1175 | Taylor & Francis Online | PDF | Teif V.B., Beshnova D.A., Marth C., Vainshtein Y., Mallm J.-P., Höfer T. and Rippe K. (2014). Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development. Genome Research. 24, 1285-1295 | Pubmed | PDF | Press release | Beshnova D.A., Cherstvy A.G. Vainshtein Y. and Teif V.B. (2014). Regulation of the nucleosome repeat length in vivo by the DNA sequence, protein concentrations and long-range interactions. PLoS Comp. Biol. 10, e1003698 | PDF | Icon for Public Library of Science Cherstvy A.G. and Teif V.B. (2014). Electrostatic effect of H1-histone protein binding on nucleosome repeat length. Phys. Biol. 11, 044001 | PDF | Teif V.B. (2014). On the Sociology of Science 2.0. In "Opening Science: The Evolving Guide on How the Internet is Changing Research, Collaboration and Scholarly Publishing", Eds. S. Bartling, S. Friesike. Springer, 2014, IX, 335 p. 43 illus. | ISBN 978-3-319-00026-8 | Order book online | Teif V.B., Erdel F., Beshnova D.A., Vainshtein Y., Mallm J.-P., Rippe K. (2013) Taking into account nucleosomes for predicting gene expression. Methods 62, 26-38 | Sciencedirect | PDF | Schöpflin, R., Teif, V. B., Müller, O., Weinberg, C., Rippe, K. & Wedemann, G. (2013). Modeling nucleosome position distributions from experimental nucleosome positioning maps. Bioinformatics. 29, 2380-2386 | Pubmed | Full Text | Cherstvy A.G. and Teif V.B. (2013) Structure-driven homology pairing of chromatin fibers: The role of electrostatics and protein bridging. J. Biol. Phys. 39, 363-385 | PDF | Teif V.B., Beshnova D., Vainshtein Y., Höfer T., Rippe K. (2013). Developing a software suite to analyze the interplay between nucleosome arrangement, DNA methylation and tanscription factor binding. EMBnet.journal 19A, 39-40. | Abstract | PDF | Teif V.B. (2013). Science 3.0: Corrections to the Science 2.0 paradigm. | ArXiv:1301.2522 | Teif V.B., Vainshtein Y., Caudron-Herger M., Mallm J.-P., Marth C., Höfer T., Rippe K. (2012). Genome-wide nucleosome positioning during embryonic stem cell development. Nature Struct. Mol. Biol. 19, 1185-92 | Pubmed | Bioquant press release | DKFZ press release | Full text online | PDF | Teif V. B. and Rippe K. (2012). Calculating transcription factor binding maps for chromatin. Brief. Bioinform. 13, 187-201 | Full text at Oxford University Press | PDF | Teif V. B., Shkrabkou A.V., Egorova V.P., Krot V.I. (2012). Nucleosomes in gene regulation: Theoretical approaches. Molecular Biology 46, 1-10. | PDF | Teif V. B. and Rippe K. (2011). Nucleosome mediated crosstalk between transcription factors. Phys. Biol. 8, 04400. | PubMed | PDF | Teif V. B. and Bohinc K. (2011). Condensed DNA: condensing the concepts. Progr. Biophys. Mol. Biol. 105, 208-222. | PDF | Längst G., Teif V. B. and Rippe K. (2011). Chromatin remodeling by translocation of nucleosomes. In “Genome organization and function in the cell nucleus”, Ed. K. Rippe, Wiley-VCH, Weinheim. P. 111-139. | Teif V. B., Ettig R. and Rippe K. (2010). A lattice model for transcription factor access to nucleosomal DNA. Biophys. J. 99, 2597-2607 | PDF |