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Evolutionary inference across eukaryotes identifies specific pressures favoring mitochondrial gene retentionIGJ?, B WilliamsCell Systems 2 101 (2016) (link; free link [OA]; blog)[Commentaries in Cell Systems and Science; press coverage here] Endless love: On the termination of a playground number gameIGJ?Recreational Mathematics Magazine (in press) (free link [OA]; blog) Monitoring Intracellular Oxygen Concentration: Implications for Hypoxia Studies and Real-Time Oxygen MonitoringM Potter, L Badder, Y Hoade, IGJ, K MortenAdv Exp Med Biol (Oxygen Transport to Tissue XXXVII) 257 (2016) (link; blog) A novel quantitative assay of mitophagy: Combining high content fluorescence microscopy and mitochondrial DNA load to quantify mitophagy and identify novel pharmacological tools against pathogenic heteroplasmic mtDNAA Diot, A Hinks-Roberts, T Lodge, C Liao, E Dombi, K Morten, S Brady, C Fratter, J Carver, R Muir, R Davis, C Green, IGJ, D Hilton-Jones, C Sue, H Mortiboys, J PoultonPharm Res 100 24 (2015) (link; blog) Stochastic modelling, Bayesian inference, and new in vivo measurements elucidate the debated mtDNA bottleneck mechanismIGJ, J Burgstaller, V Havlicek, T Kolbe, T Rülicke, G Brem, J Poulton, N JoneseLife 4 e07464 (2015) (link [OA]; blog) What is the function of mitochondrial networks? A theoretical assessment of hypotheses and proposal for future researchH Hoitzing, IGJ, N JonesBioEssays 37 687 (2015) (link [OA]; blog) Multiple hypothesis correction is vital and undermines reported mtDNA links to diseases including AIDS, cancer, and Huntingdon'sIGJ? Mitochondrial DNA doi: 10.3109/19401736.2015.1022732 2015 (link ; free link [OA]; blog) Closed-form stochastic solutions for non-equilibrium dynamics and inheritance of cellular components over many cell divisionsIGJ, N JonesProc Roy Soc A 471 20150050 (2015) (link [OA]; blog) Mitochondrial DNA disease and developmental implications for reproductive strategies(IGJ & J Burgstaller)*, J PoultonMol Hum Reprod 21 11 (2015) (link [OA]; blog) Explicit tracking of uncertainty increases the power of quantitative rule-of-thumb reasoning in cell biologyIGJ, B Rickett, N JonesBiophys J 107 2612 (2014) (link [OA]; blog)[Commentary in Biophys J; Toolbox article in Nature (VI below)] The 'mitoflash' probe cpYFP does not respond to superoxideM Schwarzl?nder, S Wagner, Y Ermakova, V Belousov, R Radi, J Beckman, G Buettner, N Demaurex, M Duchen, H Forman, M Fricker, D Gems, A Halestrap, B Halliwell, U Jakob, IGJ, N Jones, D Logan, B Morgan, F Müller, D Nicholls, S Remington, P Schumacker, C Winterbourn, L Sweetlove, A Meyer, T Dick, M MurphyNature 514 E12 (2014) (link; blog)[Press coverage here] FRIENDLY regulates mitochondrial distribution, fusion, and quality control in ArabidopsisA El Zawily, M Schwarzl?nder, I Finkemeier, IGJ, A Benamar, Y Cao, C Gissot, A Meyer, K Wilson, R Datla, D Macherel, N Jones, D LoganPlant Physiol 166 808 (2014) (link; blog) mtDNA segregation in heteroplasmic tissues is common in vivo and modulated by haplotype differences and developmental stageJ Burgstaller, IGJ, N Jones, J Albrechtová, T Kolbe, C Vogl, A Futschik, C Mayrhofer, D Klein, S Sabitzer, M Blattner, C Gülly, J Poulton, T Rülicke, J Piálek, R Steinborn, G BremCell Reports 7 2031 (2014) (link [OA]; blog)[Press coverage here; included in UK health policy via HFEA recommendations for gene therapies] A tractable genotype-phenotype map modelling the self-assembly of protein quaternary structureS Greenbury, IGJ, A Louis, S AhnertJ Roy Soc Interf 11 20140249 (2014) (link [OA]; blog)[One of the most-cited articles in Interface in 2014] Efficient parametric inference for stochastic biological systems with measured variabilityIGJ? Stat Appl Genet Mol Biol 13 379 (2014) (link ; free link [OA]; blog) Phenotypic landscape inference reveals multiple evolutionary paths to C4 photosynthesis(IGJ & B Williams)*, S Covshoff, J Hibberd eLife 2 e00961 (2013) (link [OA]; blog)[Editor's choice and commentary in eLife; press coverage here] Pulsing of membrane potential in individual mitochondria: a stress-induced mechanism to regulate respiratory bioenergetics in ArabidopsisM Schwarzl?nder, D Logan, IGJ, N Jones, A Meyer, M Fricker, L SweetlovePlant Cell 24 1188 (2012) (link; blog)[Recommended by F1000] Epistasis can lead to fragmented neutral spaces and contingency in evolutionS Schaper, IGJ, A LouisProc Roy Soc B 279 1777 (2011) (link ; free link [OA]; blog) Mitochondrial Variability as a Source of Extrinsic Cellular NoiseIGJ, B Gaal, R das Neves, T Enver, F Iborra, N JonesPLoS Comput Biol 8 e1002416 (2011) (link [OA]; blog) Evolutionary dynamics in a simple model of self-assemblyIGJ, S Ahnert, J Doye, A LouisPhys Rev E 83 066105 (2011) (link ; free link [OA]; blog)

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