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Farrer, R., Henk, D., Fisher, M., May, R. and Cuomo, C., 2016. Forthcoming. Microevolutionary traits and comparative population genomics of the emerging pathogenic fungus Cryptococcus gattii. Philosophical Transactions of the Royal Society B Henk, D. and Vilgalys, R., 2015. Forthcoming. Genetic structure within Septobasidium colonies suggests outcrossing and frequent non-self-fusion. Fungal Genomics and Biology Browne, A. G., Fisher, M. C. and Henk, D. A., 2013. Species-specific PCR to describe local-scale distributions of four cryptic species in the Penicillium chrysogenum complex. Fungal Ecology, 6 (5), pp. 419-429. Voelz, K., Ma, H., Phadke, S., Byrnes, E. J., Zhu, P., Mueller, O., Farrer, R. A., Henk, D. A., Lewit, Y., Hsueh, Y.-P., Fisher, M. C., Idnurm, A., Heitman, J. and May, R. C., 2013. Transmission of hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen Cryptococcus gattii. Plos Genetics, 9 (9), e1003771. Farrer, R. A., Henk, D. A., MacLean, D., Studholme, D. J. and Fisher, M. C., 2013. Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects. Scientific Reports, 3, 1512. Henk, D. A., Shahar-Golan, R., Devi, K.R., Boyce, K.J., Zhan, N., Fedorova, N.D., Nierman, W.C., Hsueh, P.R., Yuen, K.Y., Sieu, T.P.M., Van Kinh, N., Wertheim, H., Baker, S. G., Day, J. N., Vanittanakom, N., Bignell, E. M., Andrianopoulos, A. and Fisher, M. C., 2012. Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus penicillium marneffei. PLoS Pathogens, 8 (10), e1002851. Fisher, M. C. and Henk, D. A., 2012. Sex, drugs and recombination: the wild life of Aspergillus:News and views: Perspective. Molecular Ecology, 21 (6), pp. 1305-1306. Henk, D. A. and Fisher, M. C., 2012. The gut fungus Basidiobolus ranarum has a large genome and different copy numbers of putatively functionally redundant elongation factor genes. PLoS ONE, 7 (2), e31268. Fisher, M.C., Henk, D.A., Briggs, C.J., Brownstein, J.S., Madoff, L.C., McCraw, S.L. and Gurr, S.J., 2012. Emerging fungal threats to animal, plant and ecosystem health. Nature, 484 (7393), pp. 186-194. Farrer, R. A., Weinert, L. A., Bielby, J., Garner, T. W. J., Balloux, F., Clare, F., Bosch, J., Cunningham, A. A., Weldon, C., Du Preez, L. H., Anderson, L., Pond, S. L. K., Shahar-golan, R., Henk, D. A. and Fisher, M. C., 2011. Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage. Proceedings of the National Academy of Sciences of the United States of America, 108 (46), pp. 18732-18736. Henk, D. A., Eagle, C. E., Brown, K., Van Den Berg, M. A., Dyer, P. S., Peterson, S. W. and Fisher, M. C., 2011. Speciation despite globally overlapping distributions in Penicillium chrysogenum: the population genetics of Alexander Fleming’s lucky fungus. Molecular Ecology, 20 (20), pp. 4288-4301. Henk, D. A. and Fisher, M. C., 2011. Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis. PLoS ONE, 6 (8), e22883. Henk, D., Farr, D.F. and Aime, M.C., 2011. Mycodiplosis (Diptera) infestation of rust fungi is frequent, wide spread and possibly host specific. Fungal Ecology, 4 (4), pp. 284-289. Meece, J. K., Anderson, J. L., Fisher, M. C., Henk, D. A., Sloss, B. L. and Reed, K. D., 2011. Population Genetic Structure of Clinical and Environmental Isolates of Blastomyces dermatitidis, Based on 27 Polymorphic Microsatellite Markers. Applied and Environmental Microbiology, 77 (15), pp. 5123-5131. Cao, C., Liang, L., Wang, W., Luo, H., Huang, S., Liu, D., Xu, J., Henk, D. A. and Fisher, M. C., 2011. Common Reservoirs for Penicillium marneffei Infection in Humans and Rodents, China. Emerging Infectious Diseases, 17 (2), pp. 209-214. Simwami, S. P., Khayhan, K., Henk, D. A., Aanensen, D. M., Boekhout, T., Hagen, F., Brouwer, A. E., Harrison, T. S., Donnelly, C. A. and Fisher, M. C., 2011. Low Diversity Cryptococcus neoformans Variety grubii Multilocus Sequence Types from Thailand Are Consistent with an Ancestral African Origin. PLoS Pathogens, 7 (4), e1001343. Walker, S. F., Bosch, J., Gomez, V., Garner, T. W. J., Cunningham, A. A., Schmeller, D. S., Ninyerola, M., Henk, D. A., Ginestet, C., Arthur, C.-p. and Fisher, M. C., 2010. Factors driving pathogenicity vs. prevalence of amphibian panzootic chytridiomycosis in Iberia. Ecology Letters, 13 (3), pp. 372-382. Henk, D. and Aime, C. M., 2008. Evolution of mating pheromone and receptor genes in Pucciniomycotina. Inoculum, 59 (2), p. 19.

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