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研究领域

My research focuses on prokaryotic structural, functional and comparative genomics to understand pathways required for signal perception, communication, adaptation, symbiosis, and virulence. My current research investigates the genomic determinants within root nodule bacteria (RNB) that govern the establishment of a successful nitrogen fixing symbiosis with specific legumes. This research has a strong international collaborative context and involves 30 scientists from 15 countries across the globe.

近期论文

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Haskett, T., Wang, P., Ramsay, J., O'Hara, G., Reeve, W., Howieson, J., Terpolilli, J., (2016), Complete Genome Sequence of Mesorhizobium ciceri Strain CC1192, an Efficient Nitrogen-Fixing Microsymbiont of Cicer arietinum, Genome Announcements, 4, 3, pages -. Haskett, T., Wang, P., Ramsay, J., O'Hara, G., Reeve, W., Howieson, J., Terpolilli, J., (2016), Complete Genome Sequence of Mesorhizobium ciceri bv. biserrulae Strain WSM1284, an Efficient Nitrogen-Fixing Microsymbiont of the Pasture Legume Biserrula pelecinus, Genome Announcements, 4, 3, pages -. Tian, T., Parker, M., Seshadri, R., Reddy, T., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Baeshen, M., Baeshen, N., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequenceof Bradyrhizobium sp. Tv2a.2, a microsymbiont ofTachigali versicolor discovered in Barro ColoradoIsland of Panama, Standards in Genomic Sciences, 10, , pages -. Eshraghi, L., De Meyer, S., Tian, T., Seshadri, R., Ivanova, N., Pati, A., Markowitz, V., Woyke, T., Kyrpides, N., Tiwari, R., Yates, R., Howieson, J., Reeve, W., (2015), High-quality permanent draft genome sequence of Bradyrhizobium sp. strain WSM1743 an effective microsymbiont of an Indigofera sp. growing in Australia, Standards in Genomic Sciences, 10, 87, pages 1 - 8. Tian, T., Parker, M., Seshadri, R., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Baeshen, M., Baeshen, N., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequenceof Bradyrhizobium sp. Th.b2, a microsymbiont ofAmphicarpaea bracteata collected in Johnson City,New York, Standards in Genomic Sciences, 10, 24, pages -. Reeve, W., Ardley, J., Tian, T., Eshraghi, L., Yoon, J., Ngamwisetkun, P., Seshadri, R., Ivanova, N., Kyrpides, N., (2015), A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey, Standards in Genomic Sciences, 10, , pages 1 - 8. Tiwari, R., Howieson, J., Yates, R., Tian, T., Held, B., Tapia, R., Han, C., Seshadri, R., Reddy, T., Huntemann, M., Pati, A., Woyke, T., Markowitz, V., Ivanova, N., Kyrpides, N., Reeve, W., (2015), Genome sequence of Bradyrhizobium sp. WSM1253; a microsymbiont of Ornithopus compressus from the Greek Island of Sifnos, Standards in Genomic Sciences, 10, 113, pages 1 - 8. Seshadri, R., Reeve, W., Ardley, J., Tennessen, K., Woyke, T., Kyrpides, N., Ivanova, N., (2015), Discovery of novel plant interaction determinants from the genomes of 163 root nodule bacteria, Scientific Reports, 5, 16825, pages -. Tian, T., Parker, M., Seshadri, R., Reddy, T., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Baeshen, M., Baeshen, N., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequenceof Bradyrhizobium sp. Ai1a-2; a microsymbiont ofAndira inermis discovered in Costa Rica, Standards in Genomic Sciences, 10, DOI 10.1186/s40793-015-0007-z, pages -. Reeve, W., Sullivan, J., Ronson, C., Tian, T., Munk, C., Han, C., Reddy, T., Seshadri, R., Woyke, T., Pati, A., Markowitz, V., Ivanova, N., Kyrpides, N., (2015), High quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym, Standards in Genomic Sciences, 10, 54, pages 1 - 8. Mhamdi, R., Ardley, J., Tian, T., Seshadri, R., Reddy, T., Pati, A., Woyke, T., Markowitz, V., Ivanova, N., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequence of Ensifer meliloti strain 4H41, an effective salt and drought tolerant microsymbiont of Phaseolus vulgaris, Standards in Genomic Sciences, 10, 34, pages 1 - 7. Ziegler, D., Pothier, J., Ardley, J., Fossou, R., Pfluger, V., De Meyer, S., Vogel, G., Tonolla, M., Howieson, J., Reeve, W., Perret, X., (2015), Ribosomal protein biomarkers provide root nodule bacterial identification by MALDI-TOF MS, Applied Microbiology and Biotechnology, 99, 13, pages 5547 - 5562. De Meyer, S., Fabiano, E., Tian, T., Berkum, P., Seshadri, R., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Howieson, J., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512, Standards in Genomic Sciences, 10, 13, pages -. De Meyer, S., Fabiano, E., Tian, T., Van Berkum, P., Seshadri, R., Reddy, T., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Howieson, J., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Burkholderia sp. strain UYPR1.413, Standards in Genomic Sciences, 10, 1, pages 1 - 8. Mazur, A., De Meyer, S., Tian, T., Wielbo, J., Zerbracki, K., Seshadri, R., Reddy, T., Markowitz, V., Ivanova, N., Pati, A., Woyke, T., Kyrpides, N., Reeve, W., (2015), High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland, Standards in Genomic Sciences, 10, 7, pages 1 - 7. Yates, R., Howieson, J., De Meyer, S., Tian, T., Seshadri, R., Pati, A., Woyke, T., Markowitz, V., Ivanova, N., Kyrpides, N., Loi, A., Nutt, B., Garau, G., Sulas, L., Reeve, W., (2015), High-quality permanent draft genome sequence of Rhizobium sullae strain WSM1592; a Hedysarum coronarium microsymbiont from Sassari, Italy, Standards in Genomic Sciences, 10, 7, pages 1 - 6. Terpolilli, J., Tian, T., Yates, R., Howieson, J., Reeve, W., Poole, P., Munk, C., Tapia, R., Han, C., Markowitz, V., Tatiparthi, R., Mavrommatis, K., Ivanova, N., Pati, A., Goodwin, L., Woyke, T., Kyrpides, N., (2014), Genome sequence of Rhizobium leguminosarum bv trifolii strain WSM1689, the microsymbiont of the one flowered clover Trifolium uniflorum, Standards in Genomic Sciences, 9, , pages 527 - 539. Kelly, S., Sullivan, J., Ronson, C., Tian, T., Brau, L., Munk, C., Goodwin, L., Han, C., Woyke, T., Reddy, T., Huntemann, M., Pati, A., Mavrommatis, K., Markowitz, V., Ivanova, N., Kyrpides, N., Reeve, W., (2014), Genome sequence of the Lotus spp. microsymbiontMesorhizobium loti strain R7A, Standards in Genomic Sciences, 9, 6, pages -. Garau, G., Terpolilli, J., Hill, Y., Tian, T., Howieson, J., Brau, L., Goodwin, L., Han, C., Reddy, T., Huntemann, M., Pati, A., Woyke, T., Mavrommatis, K., Markowitz, V., Ivanova, N., Kyrpides, N., Reeve, W., (2014), Genome sequence of Ensifer medicae Di28; an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha, Standards in Genomic Sciences, 9, 4, pages -. Simon, K., Ronson, C., Sullivan, J., Tian, T., Brau, L., Davenport, K., Daligault, H., Erkkila, T., Goodwin, L., Gu, W., Munk, C., Teshima, H., Xu, Y., Chain, P., Woyke, T., Liolios, K., Pati, A., Mavrommatis, K., Markowitz, V., Ivanova, N., Kyrpides, N., Reeve, W., (2014), Genome sequence of the Lotus spp. microsymbiontMesorhizobium loti strain NZP2037, Standards in Genomic Sciences, 9, 7, pages -.

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