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Gaiti, Federico, Fernandez-Valverde, Selene L., Nakanishi, Nagayasu, Calcino, Andrew D., Yanai, Itai, Tanurdzic, Milos and Degnan, Bernard M. (2015) Dynamic and Widespread lncRNA Expression in a Sponge and the Origin of Animal Complexity. Molecular Biology and Evolution, 32 9: 2367-2382. doi:10.1093/molbev/msv117 Li, Ying, Mukherjee, Indrani, Thum, Karen E., Tanurdzic, Milos, Katari, Manpreet S., Obertello, Mariana, Edwards, Molly B., McCombie, W. Richard, Martienssen, Robert A. and Coruzzi, Gloria M. (2015) The histone methyltransferase SDG8 mediates the epigenetic modification of light and carbon responsive genes in plants. Genome Biology, 16 79: 1-15. doi:10.1186/s13059-015-0640-2 Thiebaut, Flavia, Grativol, Cl?′cia, Tanurdzic, Milos, Carnavale-Bottino, Mariana, Vieira, Tauan, Motta, Mariana Romeiro, Rojas, Cristian, Vincentini, Renato, Chabregas, Sabrina Moutinho, Hemerly, Adriana Silva, Martienssen, Robert A. and Ferreira, Paulo Cavalcanti Gomes (2014) Differential sRNA regulation in leaves and roots of sugarcane under water depletion. PLoS One, 9 4: e93822.1-e93822.17. doi:10.1371/journal.pone.0093822 Vidal, Elena A., Moyano, Tomás C., Krouk, Gabriel, Katari, Manpreet S., Tanurdzic, Milos, McCombie, W. Richard, Coruzzi, Gloria M. and Gutierrez, Rodrigo A. (2013) Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots. BMC Genomics, 14 1: 701.1-701.15. doi:10.1186/1471-2164-14-701 Thiebaut, Flavia, Grativol, Clicia, Carnavale-Bottino, Mariana, Rojas, Cristian Antonio, Tanurdzic, Milos, Farinelli, Laurent, Martienssen, Robert A., Hemerly, Adriana Silva and Gomes Ferreira, Paulo Cavalcanti (2012) Computational identification and analysis of novel sugarcane microRNAs. BMC Genomics, 13 1: 290.1-290.14. doi:10.1186/1471-2164-13-290 Banks, Jo Ann, Nishiyama, Tomoaki, Hasebe, Mitsuyasu, Bowman, John L., Gribskov, Michael, dePamphilis, Claude, Albert, Victor A., Aono, Naoki, Aoyama, Tsuyoshi, Ambrose, Barbara A., Ashton, Neil W., Axtell, Michael J., Barker, Elizabeth, Barker, Michael S., Bennetzen, Jeffrey L., Bonawitz, Nicholas D., Chapple, Clint, Cheng, Chaoyang, Correa, Luiz Gustavo Guedes, Dacre, Michael, DeBarry, Jeremy, Dreyer, Ingo, Elias, Marek, Engstrom, Eric M., Estelle, Mark, Feng, Liang, Finet, Cedric, Floyd, Sandra K., Frommer, Wolf B., Fujita, Tomomichi, Gramzow, Lydia, Gutensohn, Michael, Harholt, Jesper, Hattori, Mitsuru, Heyl, Alexander, Hirai, Tadayoshi, Hiwatashi, Yuji, Ishikawa, Masaki, Iwata, Mineko, Karol, Kenneth G., Koehler, Barbara, Kolukisaoglu, Uener, Kubo, Minoru, Kurata, Tetsuya, Lalonde, Sylvie, Li, Kejie, Li, Ying, Litt, Amy, Lyons, Eric, Manning, Gerard, Maruyama, Takeshi, Michael, Todd P., Mikami, Koji, Miyazaki, Saori, Morinaga, Shin-ichi, Murata, Takashi, Mueller-Roeber, Bernd, Nelson, David R., Obara, Mari, Oguri, Yasuko, Olmstead, Richard G., Onodera, Naoko, Petersen, Bent Larsen, Pils, Birgit, Prigge, Michael, Rensing, Stefan A., Mauricio Riano-Pachon, Diego, Roberts, Alison W., Sato, Yoshikatsu, Scheller, Henrik Vibe, Schulz, Burkhard, Schulz, Christian, Shakirov, Eugene V., Shibagaki, Nakako, Shinohara, Naoki, Shippen, Dorothy E., Sorensen, Iben, Sotooka, Ryo, Sugimoto, Nagisa, Sugita, Mamoru, Sumikawa, Naomi, Tanurdzic, Milos, Theissen, Guenter, Ulvskov, Peter, Wakazuki, Sachiko, Weng, Jing-Ke, Willats, William W. G. T., Wipf, Daniel, Wolf, Paul G., Yang, Lixing, Zimmer, Andreas D., Zhu, Qihui, Mitros, Therese, Hellsten, Uffe, Loque, Dominique, Otillar, Robert, Salamov, Asaf, Schmutz, Jeremy, Shapiro, Harris, Lindquist, Erika, Lucas, Susan, Rokhsar, Daniel and Grigoriev, Igor V. (2011) The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants. Science, 332 6032: 960-963. doi:10.1126/science.1203810 Lee, Tae-Jin, Pascuzzi, Pete E., Settlage, Sharon B., Shultz, Randall W., Tanurdzic, Milos, Rabinowicz, Pablo D., Menges, Margit, Zheng, Ping, Main, Dorrie, Murray, James A. H., Sosinski, Bryon, Allen, George C., Martienssen, Robert A., Hanley-Bowdoin, Linda, Vaughn, Matthew W. and Thompson, William F. (2010) Arabidopsis thaliana chromosome 4 replicates in two phases that correlate with chromatin state. PLoS Genetics, 6 6: e1000982.1-e1000982.18. doi:10.1371/journal.pgen.1000982 Slotkin, R. Keith, Vaughn, Matthew, Borges, Filipe, Tanurdzic, Milos, Becker, Joerg D., Feijo, Jose A. and Martienssen, Robert A. (2009) Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell, 136 3: 461-472. doi:10.1016/j.cell.2008.12.038 Tanurdzic, Milos, Vaughn, Matthew W., Jiang, Hongmei, Lee, Tae-Jin, Slotkin, R. Keith, Sosinski, Bryon, Thompson, William F., Doerge, R. W. and Martienssen, Robert A. (2008) Epigenomic consequences of immortalized plant cell suspension culture. PLoS Biology, 6 12: 2880-2895. doi:10.1371/journal.pbio.0060302 Masuda, Hana Paula, Cabral, Luiz Mors, De Veylder, Lieven, Tanurdzic, Milos, Engler, Janice de Almeida, Geelen, Danny, Inze, Dirk, Martienssen, Robert A., Ferreira, Paulo C. G. and Hemerly, Adriana S. (2008) ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription. EMBO Journal, 27 20: 2746-2756. doi:10.1038/emboj.2008.191 Gutierez, Rodrigo A., Stokes, Trevor L., Thum, Karen, Xu, Xiaodong, Obertello, Mariana, Katari, Manpreet S., Tanurdzic, Milos, Dean, Alexis, Nero, Dannion C., McClung, C. Robertson and Coruzzi, Gloria M. (2008) Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1. Proceedings of the National Academy of Sciences of the United States of America, 105 12: 4939-4944. doi:10.1073/pnas.0800211105 Vaughn, Matthew W., Tanurdzic, Milos, Lippman, Zachary, Jiang, Hongmei, Carrasquillo, Robert, Rabinowicz, Pablo D., Dedhia, Neilay, McCombie, W. Richard, Agier, Nicolas, Bulski, Agnes, Colot, Vincent, Doerge, R. W. and Martienssen, Robert A. (2007) Epigenetic natural variation in Arabidopsis thaliana. PloS Biology, 5 7: 1617-1629. doi:10.1371/journal.pbio.0050174 Vaughn, Matthew W., Tanurdzic, Milos and Martienssen, Rob (2005) Replication, repair, and reactivation. Developmental Cell, 9 6: 724-725. doi:10.1016/j.devcel.2005.11.011 Wang, Wenming, Tanurdzic, Milos, Luo, Meizhong, Sisneros, Nicholas, Kim, Hye Ran, Weng, Jing-Ke, Kudrna, Dave, Mueller, Christopher, Arumuganathan, K., Carlson, John, Chapple, Clint, de Pamphilis, Claude, Mandoli, Dina, Tomkins, Jeff, Wing, Rod A. and Banks, Jo Ann (2005) Construction of a bacterial artificial chromosome library from the spikemoss Selaginella moellendorffii: a new resource for plant comparative genomics. BMC Plant Biology, 5 10.1-10.8. doi:10.1186/1471-2229-5-10 Weng, Jing-Ke, Tanurdzic, Milos and Chapple, Clint (2005) Functional analysis and comparative genomics of expressed sequence tags from the lycophyte Selaginella moellendorffii. BMC Genomics, 6 85.1-85.13. doi:10.1186/1471-2164-6-85 Tanurdzic, M., Obreht, D., Vapa, L. and Davidovic, M. (2004) Polyglutamine-encoding microsatellite contributes to LMW GS diversity in Triticum monococcum. Cereal Research Communications, 32 3: 301-308. Tanurdzic, Milos and Banks, Jo Ann (2004) Sex-determining mechanisms in land plants. Plant Cell, 16 Supplement 1: S61-S71. doi:10.1105/tpc.016667