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Song C.#*, Jin K.#* & Raaijmakers J.M. (2021) Designing a home for beneficial plant microbiomes. Current Opinion in Plant Biology, 62, 102025.
Zhou L., Song C., Li Z., Kuipers O.P*. (2021) Antimicrobial activity screening of rhizosphere soil bacteria from tomato and genome-based analysis of their antimicrobial biosynthetic potential. BMC Genomics, 22, 29.
Zhou L., Song C., Munoz C.Y., Kuipers O.P*. (2021) Bacillus cabrialesii BH5 protects tomato plants against Botrytis cinerea by production of specific antifungal compounds. Frontiers in Microbiology, 12, 707609.
Song C., Zhu F.*, Carrión V.J.* & Cordovez V.* (2020) Beyond plant microbiome composition: exploiting microbial functions and plant traits via integrated approaches. Frontiers in Bioengineering and Biotechnology, 8, 896.
孙铭雪, 宋春旭*. (2020) 驯化对植物微生物组结构和功能影响的研究进展. 土壤学报, https://kns.cnki.net/kcms/detail/32.1119.P.20201230.1337.004.html.
Li Z., Charkraborty P., de Vries R.H., Song C., Zhao X., Roelfes G., Scheffers D., Kuipers O.P*. (2020) Characterization of two relacidines belonging to a novel class of circular lipopeptides that act against Gram‐negative bacterial pathogens. Environmental Microbiology, 22, 5125-5136.
Li Z., Song C., Yi Y., Kuiper O.P*. (2020) Characterization of plant growth-promoting rhizobacteria from perennial ryegrass and genome mining of novel antimicrobial gene clusters. BMC Genomics, 21, 157.
Li Z., de Vries R.H., Chakraborty P., Song C., Zhao X., Scheffers D., Roelfes G., Kuipers O.P*. (2020) Novel modifications of nonribosomal peptides from Brevibacillus laterosporus MG64 and investigation of their mode of action. Applied and Environmental Microbiology, 86, e01981-20.
Shan S., Wang W., Song C., Wang M., Sun B., Li Y., Fu Y., Gu X., Ruan W*., Rasman S. (2019) The symbiotic bacteria Alcaligenes faecalis of the entomopathogenic nematodes Oscheius spp. exhibit potential biocontrol of plant‐ and entomopathogenic fungi. Microbial Biotechonology, 12, 459-471.
Li Z., Song C.*, de Jong A., Kuipers O.P.* (2019) Draft genome sequences of six Bacillus strains and one Brevibacillus strain isolated from the rhizosphere of perennial ryegrass (Lolium perenne). Microbiology Resource Announcements, 8, e01586-18.
Zhou L., Song C., de Jong A., Kuipers O.P.* (2019) Draft genome sequences of 10 Paenibacillus and Bacillus sp. strains isolated from healthy tomato plants and rhizosphere soil. Microbiology Resource Announcements, 8(12):e00055-19
Wu H#, Wang H#, Zhu L, Wei X, Wang B, Song C, Yu. Z* (2019). The dlt operon in Bacillus thuringiensis confers resistance to cationic antimicrobial peptides and virulence to insect. Acta Microbiologica Sinica. 59(10): 1897–1914
Yi Y., Li Z., Song C., Kuipers O.P*. (2018) Exploring plant‐microbe interactions of the rhizobacteria Bacillus subtilis and Bacillus mycoides by use of the CRISPR‐Cas9 system. Environmental Microbiology, 20, 4245-4260.
van Heel A.J#., de Jong A#., Song C., Viel J.H., Kok J., Kuipers O.P*. (2018) BAGEL4: A user-friendly web server to thoroughly mine RiPPs and bacteriocins. Nucleic Acids Research, 46, W278-W281.
Yan Q., Lopes L.D., Shaffer B.T., Kidarsa T.A., Vining O., Philmus B., Song C., Stockwell V.O., Raaijmakers J.M., Mcphail K.L., Andreote F.D., Chang J.H. & Loper J.E*. (2018) Secondary metabolites and interspecific competition affect accumulation of spontaneous mutants in the gacS/gacA regulatory system in Pseudomonas protegens. mBio, 9, e01845-17.
Tyc O., Song C., Dickschat J., Vos M. & Garbeva. P*. (2017) The ecological role of volatile and soluble secondary metabolites produced by soil bacteria. Trends in Microbiology, 25, 280-292.
Schulz-Bohm K#*., Geisen S#., Wubs J., Song C., de Boer W. & Garbeva P. (2017) The prey’s scent - Volatile organic compound mediated interactions between soil bacteria and their protist predators. The ISME Journal, 11, 817-820.
Song C., Kidarsa T.A., van de Mortel J.E., Loper J.E. & Raaijmakers J.M*. (2016) Living on the edge: spatial heterogeneity and convergent evolution of social cheaters in swarming colonies of Pseudomonas protegens. Environmental Microbiology, 18, 3453-3465.
Song C.*, R. Schmidt., de Jager V., Krzyzanowska D., Jongedijk E., Cankar K., Beekwilder J., van Veen A., de Boer W., van Veen J.A., & Garbeva P. (2015) Exploring the genomic traits of fungus-feeding bacterial genus Collimonas. BMC Genomics, 16, 1103.
Song C. #, Mazzola M.#, Cheng X., Alexandrov T., Oetjen J., Dorrestein P., Watrous J., van der Voort M. & Raaijmakers J.M*. (2015) Molecular and chemical dialogues in bacteria protozoa interactions. Scientific Reports, 5, 12837.
Song C.#, Sundqvist G.#, Malm E., de Bruijn I., Aundy K., van de Mortel J.E., Bulone V. & Raaijmakers J.M*. (2015) Lipopeptide biosynthesis in Pseudomonas fluorescens is regulated by the protease complex ClpAP. BMC Microbiology, 15, 29.
Song C., van der Voort M., van de Mortel J.E., Hassan K.A., Elbourne L.D., Paulsen I.T., Loper J.E. & Raaijmakers J.M*. (2015) The Rsm regulon of plant growth-promoting Pseudomonas fluorescens SS101: role of small RNAs in regulation of lipopeptide biosynthesis. Microbial Biotechnology, 8, 296-310.
Zachow C*., Jahanshah G. de Bruijn I. Song C., Ianni F., Pataj Z., Gerhardt H., Pianet I., L?mmerhofer M., Berg G., Gross H. & Raaijmakers J.M. (2015) The novel lipopeptide poaeamide of the endophyte Pseudomonas poaeRE*1-1-14 is involved in pathogen suppression and root colonization. Molecular Plant-Microbe Interactions, 28, 800-810.
Song C., Aundy K., van de Mortel J. & Raaijmakers J.M*. (2014) Discovery of new regulatory genes of lipopeptide biosynthesis in Pseudomonas fluorescens. FEMS Microbiology Letters, 356, 166-175.
J.E. Loper*, Hassan K.A., Mavrodi D.V., Davis II E.W., Lim C.K., Shaffer B.T., Elbourne L.D., Stockwell V.O., Hartney S.L., Breakwell K., Henkels M.D., Tetu S.G., Rangel L.I., Kidarsa T.A., Wilson N.L., van de Mortel J.E., Song C., Blumhagen R., Radune D., Hostetler J.B., Brinkac L.M., Durkin A.S., Kluepfel D.A., Wechter W.P., Anderson A.J., Kim Y.C., Pierson III L.S., Pierson E.A., Lindow S.E., Kobayashi D.Y., Raaijmakers J.M., Weller D.M., Thomashow L.S., Allen A.E. & Paulsen I.T. (2012) Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions. PLoS Genetics, 8, e1002784.
Zhao C.#, Song C.#, Luo Y., Yu Z. & Sun M*. (2008) L-2,3-diaminopropionate: one of the building blocks for the biosynthesis of Zwittermicin A in Bacillus thuringiensis subsp. kurstakistrain YBT-1520. FEBS Letters, 582, 3125-3131.
Zhao C., Luo Y., Song C., Liu Z., Chen S., Yu Z. & Sun M*. (2007) Identification of three Zwittermicin A biosynthesis-related genes from Bacillus thuringiensis subsp. kurstaki strain YBT-1520. Archives of Microbiology, 187, 313-319.
出版著作
Song C*. Regulation and natural functions of lipopeptide biosynthesis in Pseudomonas. PhD thesis, Wageningen University, Wageningen, NL. 2015.
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