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1. Zhu, Y. G., Y. Zhao, B. Li, C. L. Huang, S. Y. Zhang, S. Yu, Y. S. Chen, T. Zhang, M. R. Gillings and J. Q. Su (2017). "Continental-scale pollution of estuaries with antibiotic resistance genes." Nat Microbiol 2: 16270.
2. Su, J. Q., Y. Xia, H. Y. Yao, Y. Y. Li, X. L. An, B. K. Singh, T. Zhang and Y. G. Zhu (2017). "Metagenomic assembly unravel microbial response to redox fluctuation in acid sulfate soil." Soil Biology & Biochemistry 105: 244-252.
3. Su, J. Q., L. Cui, Q. L. Chen, X. L. An and Y. G. Zhu (2017). "Application of genomic technologies to measure and monitor antibiotic resistance in animals." Ann N Y Acad Sci 1388(1): 121-135.
4. Ding, L. J., J. Q. Su, H. Li, Y. G. Zhu and Z. H. Cao (2017). "Bacterial succession along a long-term chronosequence of paddy soil in the Yangtze River Delta, China." Soil Biology & Biochemistry 104: 59-67.
5. Zhu, Y.-G., J.-Q. Su, Z. Cao, K. Xue, J. Quensen, G.-X. Guo, Y.-F. Yang, J. Zhou, H.-Y. Chu and J. M. Tiedje (2016). "A buried Neolithic paddy soil reveals loss of microbial functional diversity after modern rice cultivation." Science Bulletin 61(13): 1052-1060.
6. Zhang, Y., S. Chen, X. Hao, J.-Q. Su, X. Xue, Y. Yan, Y.-G. Zhu and J. Ye (2016). "Transcriptomic Analysis Reveals Adaptive Responses of an Enterobacteriaceae Strain LSJC7 to Arsenic Exposure." Frontiers in Microbiology 7.
7. Xu, L., W. Ouyang, Y. Qian, C. Su, J. Su and H. Chen (2016). "High-throughput profiling of antibiotic resistance genes in drinking water treatment plants and distribution systems." Environmental Pollution 213: 119-126.
8. Chen, Q., X. An, H. Li, J. Su, Y. Ma and Y.-G. Zhu (2016). "Long-term field application of sewage sludge increases the abundance of antibiotic resistance genes in soil." Environment International 92-93: 1-10.
9. Su, J. Q., B. Wei, W. Y. Ou-Yang, F. Y. Huang, Y. Zhao, H. J. Xu and Y. G. Zhu (2015). "Antibiotic Resistome and Its Association with Bacterial Communities during Sewage Sludge Composting." Environ Sci Technol 49(12): 7356-7363.
10. Su, J., W. Ouyang, Y. Hong, D. Liao, S. Khan and H. Li (2015). "Responses of endophytic and rhizospheric bacterial communities of salt marsh plant (Spartina alterniflora) to polycyclic aromatic hydrocarbons contamination." Journal of Soils and Sediments: 1-9.
11. Su, J.-Q., L.-J. Ding, K. Xue, H.-Y. Yao, J. Quensen, S.-J. Bai, W.-X. Wei, J.-S. Wu, J. Zhou, J. M. Tiedje and Y.-G. Zhu (2015). "Long-term balanced fertilization increases the soil microbial functional diversity in a phosphorus-limited paddy soil." Molecular Ecology 24(1): 136-150.
12. Zhang, S.-Y., F.-J. Zhao, G.-X. Sun, J.-Q. Su, X.-R. Yang, H. Li and Y.-G. Zhu (2015). "Diversity and Abundance of Arsenic Biotransformation Genes in Paddy Soils from Southern China." Environmental Science & Technology.
13. Wang, N., L.-J. Ding, H.-J. Xu, H.-B. Li, J.-Q. Su* and Y.-G. Zhu (2015). "Variability in responses of bacterial communities and nitrogen oxide emission to urea fertilization among various flooded paddy soils." FEMS Microbiology Ecology 91(3).
14. Ouyang WY, Huang FY, Zhao Y, Li H, Su JQ* (2015). Increased levels of antibiotic resistance in urban stream of Jiulongjiang River, China. Appl Microbiol Biotechnol 99: 5697-5707.
15. Li, H., B. S. Weng, F. Y. Huang, J. Q. Su and X. R. Yang (2015). "pH regulates ammonia-oxidizing bacteria and archaea in paddy soils in Southern China." Appl Microbiol Biotechnol 99(14): 6113-6123.
16. Xie, W. Y., J. Q. Su* and Y. G. Zhu (2015). "Phyllosphere bacterial community of floating macrophytes in paddy soil environments as revealed by illumina high-throughput sequencing." Appl Environ Microbiol 81(2): 522-532.
17. Yang, X. R., H. Li, S. A. Nie, J. Q. Su, B. S. Weng, G. B. Zhu, H. Y. Yao, J. A. Gilbert and Y. G. Zhu (2015). "Potential contribution of anammox to nitrogen loss from paddy soils in southern china." Appl Environ Microbiol 81(3): 938-947.
18. Ding, L.-J., J.-Q. Su, H.-J. Xu, Z.-J. Jia and Y.-G. Zhu (2015). "Long-term nitrogen fertilization of paddy soil shifts iron-reducing microbial community revealed by RNA-13C-acetate probing coupled with pyrosequencing." ISME J, 9(3): 721-734.
19. Huang, X., C. Liu, K. Li, J. Su, G. Zhu and L. Liu (2015). "Performance of vertical up-flow constructed wetlands on swine wastewater containing tetracyclines and tet genes." Water Research 70(0): 109-117.
20. Wang, H. T., J. Q. Su, T. L. Zheng and X. R. Yang (2014). "Impacts of vegetation, tidal process, and depth on the activities, abundances, and community compositions of denitrifiers in mangrove sediment." Appl Microbiol Biotechnol 98(22): 9375-9387.
21. Xu, H. J., X. H. Wang, H. Li, H. Y. Yao, J. Q. Su and Y. G. Zhu (2014). "Biochar impacts soil microbial community composition and nitrogen cycling in an acidic soil planted with rape." Environ Sci Technol 48(16): 9391-9399.
22. Xie, W. Y., J. Q. Su* and Y. G. Zhu* (2014). "Arsenite Oxidation by the Phyllosphere Bacterial Community Associated with Wolffia australiana." Environ Sci Technol 48(16): 9668-9674.
23. Wang, F. H., M. Qiao, J. Q. Su, Z. Chen, X. Zhou and Y. G. Zhu (2014). "High throughput profiling of antibiotic resistance genes in urban park soils with reclaimed water irrigation." Environ Sci Technol 48(16): 9079-9085.
24. Nie, S.-A., H.-J. Xu, S. Li, H. Li and J.-Q. Su* (2014). "Relationships Between Abundance of Microbial Functional Genes and the Status and Fluxes of Carbon and Nitrogen in Rice Rhizosphere and Bulk Soils." Pedosphere 24(5): 645-651.
25. Xu, H.J., Li, S., Su, J.Q., Nie, S.A., Gibson, V., Li, H., and Zhu, Y.G. (2014) Does urbanization shape bacterial community composition in urban park soils? A case study in 16 representative Chinese cities based on the pyrosequencing method. FEMS Microbiol Ecol 87: 182-192.
26. Xiao, K.Q., Bao, P., Bao, Q.L., Jia, Y., Huang, F.Y., Su, J.Q., and Zhu, Y.G. (2014) Quantitative analyses of ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) large-subunit genes (cbbL) in typical paddy soils. FEMS Microbiol Ecol 87: 89-101.
27. Su, JQ, B. Wei, C. Y. Xu, M. Qiao and Y. G. Zhu (2014). Functional metagenomic characterization of antibiotic resistance genes in agricultural soils from China. Environment International 65(0): 9-15.
28. Peng, J. J., H. Li, JQ Su, Q. F. Zhang, J. P. Rui and C. Cai (2013). Response of bacterial communities to short-term pyrene exposure in red soil. Frontiers of Environmental Science & Engineering 7(4): 559-567.
29. Zhang, Q., J. Peng, Q. Chen, X. Yang, Y. Hong and J. Su* (2013). Abundance and composition of denitrifiers in response to Spartina alterniflora invasion in estuarine sediment. Canadian Journal of Microbiology 59(12): 825-836.
30. Peng J, Zhang Y, Su JQ, Qiu Q, Jia Z, Zhu Y-G (2013). Bacterial communities predominant in the degradation of 13C4-4,5,9,10-pyrene during composting. Bioresour Technol 143: 608-614.
31. Zhu YG, Johnson TA, Su JQ, Qiao M, Guo GX, Stedtfeld RD et al (2013). Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc Natl Acad Sci U S A 110: 3435-3440.
32. Yanyan Zhou, Jianqiang Su, Qiliang Lai, Xinyi Li, Xiaoru Yang, Peiyan Dong, and Tianling Zheng (2013). Phaeocystidibacter luteus gen. nov. sp. nov., a new member of the family Cryomorphaceae isolated from the marine alga Phaeocystis globosa and emended description of Owenweeksia hongkongensis. Int J Syst Evol Microbiol. 63(Pt 3): 1143-1148. (Co-first author).
33. Jianqiang Su, Yanyan Zhou, Qiliang Lai, Xinyi Li, Peiyan Dong, Xiaoru Yang, Bangzhou Zhang, Jinlong Zhang, Xiaowei Zheng, Yun Tian and Tianling Zheng (2012). Sinobacterium caligoides gen. nov. sp. nov., a new member of the family Oceanospirillaceae isolated from South China Sea and emended description of Amphritea japonica. nt J Syst Evol Microbiol 2013, 63(Pt 6), 2095-100