近期论文
查看导师新发文章
(温馨提示:请注意重名现象,建议点开原文通过作者单位确认)
M. Li, M. Cheng, Y. Ye, W. K. Hong, H. F. Ting, T. W. Lam, C. Y. Tang, T. Wong, S. M. Yiu "Predicting RNA secondary structures: One-grammar-fits-all solution", in International Symposium on Bioinformatics and Applications (ISBRA): 211-222, 2015.
B. Misof, S. Liu, K. Meusemann, R. S. Peters, A. Donath, C. Mayer, P. B. Frandsen, J. Ware, T. Flouri, R. G. Beutel, O. Niehuis, M. Petersen, F. Izquierdo-Carrasco, T. Wappler, J. Rust, A. J. Aberer, U. Aspock, H. Aspock, D. Bartel, A. Blanke, S. Berger, A. Bohm, T. R. Buckley, B. Calcott, J. Chen, F. Friedrich, M. Fukui, M. Fujita, C. Greve, P. Grobe, S. Gu, Y. Huang, L. S. Jermiin, A. Y. Kawahara, L. Krogmann, M. Kubiak, R. Lanfear, H. Letsch, Y. Li, Z. Li, J. Li, H. Lu, R. Machida, Y. Mashimo, P. Kapli, D. D. McKenna, G. Meng, Y. Nakagaki, J. L. Navarrete-Heredia, M. Ott, Y. Ou, G. Pass, L. Podsiadlowski, H. Pohl, B. M. von Reumont, K. Schutte, K. Sekiya, S. Shimizu, A. Slipinski, A. Stamatakis, W. Song, X. Su, N. U. Szucsich, M. Tan, X. Tan, M. Tang, J. Tang, G. Timelthaler, S. Tomizuka, M. Trautwein, X. Tong, T. Uchifune, M. G. Walzl, B. M. Wiegmann, J. Wilbrandt, B. Wipfler, T. K. F. Wong, Q. Wu, G. Wu, Y. Xie, S. Yang, Q. Yang, D. K. Yeates, K. Yoshizawa, Q. Zhang, R. Zhang, W. Zhang, Y. Zhang, J. Zhao, C. Zhou, L. Zhou, T. Ziesmann, S. Zou, Y. Li, X. Xu, Y. Zhang, H. Yang, J. Wang, J. Wang, K. M. Kjer, and X. Zhou, “Phylogenomics resolves the timing and pattern of insect evolution”, Science, 346: 763-767, 2014.
V. Jayaswal, T. K. F. Wong, J. Robinson, L. Poladian, and L. S. Jermiin, “Mixture models of nucleotide sequence evolution that account for heterogeneity in the substitution process across sites and across lineages”, Systematic Biology, 63: 726-742, 2014.
X. Hu, T. K. F. Wong, Z. J. Lu, T. F. Chan, T. C. K. Lau, S. M. Yiu, and K. Y. Yip, “Computational identification of protein binding sites on RNAs using high-throughput RNA structure-probing data”, Bioinformatics, 30: 1049-1055, 2014.
R. Luo, T. Wong, J. Zhu, C. M. Liu, X. Zhu, E. Wu, L. K. Lee, H. Lin, W. Zhu, and D. W. Cheung, “SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner”, PloS one, 8: e65632, 2013.
T. K. F. Wong, and S. M. Yiu, “Structural alignment of RNA with triple helix structure”, Journal of Computational Biology, 19: 365-378, 2012.
T. K. F. Wong, Y. Chiu, T. W. Lam, and S. M. Yiu, “Memory efficient algorithms for structural alignment of RNAs with pseudoknots”, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9: 161-168, 2012.
C. Ma, T. K. F. Wong, T. W. Lam, W. K. Hon, K. Sadakane, and S. M. Yiu, “An Efficient Alignment Algorithm for Searching Simple Pseudoknots over Long Genomic Sequence”, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9: 1629-1638, 2012.
C. M. Liu, T. Wong, E. Wu, R. Luo, S. M. Yiu, Y. Li, B. Wang, C. Yu, X. Chu, K. Zhao, R. Li, T. W. Lam, “SOAP3: Ultra-fast GPU-based parallel alignment tool for short reads”, Bioinformatics, 28: 878-879, 2012.
T. K. F. Wong, B. W. Y. Cheung, T. W. Lam, and S. M. Yiu, “Local structural alignment of RNA with affine gap model”, BMC proceedings, 5: S2, 2011.
T. K. F. Wong, K. L. Wan, B. Y. Hsu, B. W. Cheung, W. K. Hon, T. W. Lam, and S. M. Yiu, “RNASAlign: RNA structural alignment system”, Bioinformatics, 27: 2151-2152, 2011.
T. K. F. Wong, T. W. Lam, W. K. Sung, B. W. Cheung, and S. M. Yiu, “Structural alignment of RNA with complex pseudoknot structure”, Journal of Computational Biology, 18: 97-108, 2011.
T. K. F. Wong, T. W. Lam, S. M. Yiu, and S. C. Wong, “Improving the accuracy of signal transduction pathway construction using level-2 neighbours”, International journal of bioinformatics research and applications, 6: 542-555, 2010.
T. K. F. Wong, T. W. Lam, W. K. Sung, and S. M. Yiu, “Adjacent nucleotide dependence in ncRNA and order-1 SCFG for ncRNA identification”, PloS one, 5: e12848, 2010.
Y. Jia, T. K. F. Wong, Y. Q. Song, S. M. Yiu, and D. K. Smith, “Refining orthologue groups at the transcript level”, BMC genomics, 11: S11, 2010.
T. K. F. Wong, T. W. Lam, P. Chan, and S. M. Yiu, “Correcting short reads with high error rates for improved sequencing result”, International journal of bioinformatics research and applications, 5: 224-237, 2009.
W. Yang, P. Ng, M. Zhao, T. K. F. Wong, S. M. Yiu, and Y. L. Lau, “Promoter-sharing by different genes in human genome–CPNE1 and RBM12 gene pair as an example”, BMC genomics, 9: 456, 2008.
T. K. F. Wong, T. W. Lam, W. Yang, and S. M. Yiu, “Finding alternative splicing patterns with strong support from expressed sequences on individual exons/introns”, Journal of bioinformatics and computational biology, 6: 1021-1033, 2008.