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Li YH, Zhou GY, Ma JX, Jiang WK, Jin LG, Zhang ZH, Guo Y, Zhang JB, Sui Y, Zheng LT, Zhang SS, Zuo Q, Shi XH, Li YF, Zhang WK, Hu Y, Kong G, Hong HL, Liu ZX, Wang Y, Ruan H, Yeung CKL, Liu J, Wang H, Zhang L, Guan R, Wang KJ, Li WB, Chen SY, Chang RZ, Jiang Z, Jackson SA, Li RQ and Qiu LJ. De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits. Nature Biotechnology, 2014, 32(10):1045-1052
Li C*, Li YH*, Li YF*, Lu HF, Hong HL, Tian Y, Li HY, Zhao T, Zhou XW, Liu J, Zhou XA, Jackson SA, Liu B, Qiu LJ. A domestication-associated gene GmPRR3b regulates circadian clock and flowering time in soybean. Molecular Plant, 2020, https://doi.org/10.1016/j.molp.2020.01.014.
Li YH, Li W, Zhang C, Yang L, Chang RZ, Gaut BS and Qiu LJ. Genetic diversity in domesticated soybean (Glycine max) and its wild progenitor (Glycine soja) for simple sequence repeat and single-nucleotide polymorphism loci. New Phytologist, 2010, 188: 242-253
Han YP*, Zhao X*, Liu DY*, Li YH*, Lightfoot DA, Yang ZJ, Zhao L, Zhou G, Wang ZK, Huang L, Zhang ZW, Qiu LJ, Zheng HK, Li WB. Domestication footprints anchor genomic regions of agronomic importance in soybeans, New Phytologist, 2016, 209(2): 871-884
Li YH, Li DL, Jiao YQ, Schnable JC, Li YF, Li HH, Chen HZ, Hong HL, Zhang T, Liu B, Liu ZX, You QB, Tian Y, Guo Y, Guan RX, Zhang LJ, Chang RZ, Zhang ZW, Reif J, Zhou XA, Schnable PS, Qiu LJ. Identification of loci controlling adaptation in Chinese soybean landraces via a combination of conventional and bioclimatic GWAS. Plant Biotechnology Journal, 2020, 18(2):389-401
Koopman WJM*, Li YH *, Coart EL *, Weg WEVD, Vosman B, Roldán-Ruiz I and Smulders MJM. Linked vs. unlinked markers: multilocus microsatellite haplotype-sharing as a tool to estimate gene flow and introgression. Molecular Ecology, 2007, 16: 243-256
Tian Y, Liu B, Reif JC, Guan RX, Li YH*, Qiu LJ. Deep genotyping of the gene GmSNAP facilitates pyramiding resistance to cyst nematode in soybean. Crop Journal, 2019, 7: 677-684. https://doi.org/10.1016/j.cj.2019.04.003
Li YH*, Reif JC, Hong HL, Li HH, Liu ZX, Ma YS, Li J, Tian Y, Li YF, Li WB, Qiu LJ. Genome-wide association mapping of QTL underlying seed oil and protein contents of a diverse panel of soybean accessions, Plant Science, 2018, 266: 95-101 3.785
Li YH, Shi XH, Li HH, Reif JC, Wang JJ, Liu ZX, He S, Yu BS, and Qiu LJ. Dissecting the genetic basis of resistance to soybean cyst nematode combining linkage and association mapping. Plant Genome, 2016, 9(2): doi:10.3835/plantgenome2015.04.0020
Li YH, Reif JC, Ma YS, Hong HL, Liu ZX, Chang RZ and Qiu LJ. Targeted association mapping demonstrating the complex molecular genetics of fatty acid formation in soybean. BMC Genomics, 2015, 16:841.
Li YH, Reif Jochen C, Jackson Scott A, Ma Yan-Song, Chang Ru-Zhen, Qiu Li-Juan. Detecting SNPs underlying domestication-related traits in soybean. BMC Plant Biology, 2014, 14:251
Li YH, Liu B, Reif JC, Liu YL, Li HH, Chang RZ and Qiu LJ. Development of Insertion and Deletion markers based on biparental resequencing for fine mapping seed weight in soybean. Plant Genome, 2014, 7(3): doi: 10.3835/plantgenome2014.04.0014
Li YH, Zhao SC, Ma JX, Li D, Yan L, Li J, Qi XT, Guo X, Zhang L, He W, Chang RZ, Liang Q, Guo Y, Ye C, Wang XB, Tao Y, Guan R, Wang JY, Liu YL, Jin LG, Zhang X, Liu Z, Zhang L, Chen J, Wang KJ, Nielsen R, Li RQ, Chen PY, Li WB, Reif JC, Purugganan M, Wang J, Zhang MC, Wang J and Qiu LJ. Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing. BMC Genomics, 2013, 14:579
Liu YL*, Li YH*, Reif JC, Mette MF, Liu ZX, Liu B, Zhang SS, Yan L, Chang RZ and Qiu LJ. Identification of quantitative trait loci underlying plant height and seed weight in soybean. Plant Genome, 2013, 6(3): doi: 10.3835/plantgenome2013.03.0006
Li YH, Guan RX, Liu ZX, Ma YS, Wang LX, Li LH, Lin FY, Luan WJ, Chen PY, Yan Z, Guan Y, Zhu L, Ning XC, Smulders MJM, Li W, Piao RH, Cui YH, Yu ZM, Guan M, Chang RZ, Hou AF, Shi AN, Zhang B, Zhu SL and Qiu LJ. Genetic structure and diversity of cultivated soybean (Glycine max (L.) Merr.) landraces in China. Theor Appl Genet, 2008, 117: 857-871
Li YH, Zhang C, Gao ZS, Smulders MJM, Ma ZL, Liu ZX, Nan HY, Chang RZ and Qiu LJ. Development of SNP markers and haplotype analysisof the candidate gene for rhg1, which confers resistance to soybean cyst nematode in soybean. Mol Breeding, 2009, 24: 63-76
Li YH, Liu YL, Reif JC, Liu ZX, Liu B, Mette MF, Chang RZ and Qiu LJ. Bi-parental re-sequencing coupled with SNP genotyping of a segregating population offers insights into the landscape of recombination and fixed genomic regions in elite soybean. G3: Genes, Genom, Genet, 2014, 4: 553- 560
Li YH, Smulders MJM, Chang RZ and Qiu LJ. Genetic diversity and association mapping in a collection of selected Chinese soybean accessions based on SSR marker analysis. Conserv Genet, 2011, 12:1145-1157
Li YH, Zhang C, Smulders MJM, Li W, Ma YS, Xu Q, Chang RZ and Qiu LJ. Analysis of average standardized SSR allele size supports domestication of soybean along the Yellow River. Genet Resour Crop Ev, 2013, 60(2): 763-776
Li YH, Han ZH and Xu XF. The segregation patterns of AFLP markers in F1 hybrids of a cross between tetraploid and diploid species in Genus Malus. Plant Breeding, 2004, 123(4):316-320
Li YH, Smulders MJM, Chang RZ and Qiu LJ. Analysis of SSRs uncovers hierarchical structure and genetic diversity in Chinese soybean landraces. J Integr Agr, 2010, 9(12): 1739-1748
Liu YL*, Li YH*, Zhou G, Uzokwe N, Chang RZ, Chen SY and Qiu LJ. Development of soybean EST-SSR markers and their use to assess genetic diversity in the subgenus Soja. J Integr Agr, 2010, 9(10): 1423-1429
Li YF, Hong HL, Li YH*, Ma YS, Chang RZ, Qiu LJ. The identification of presence/absence variants associated with the apparent differences of growth period structures between cultivated and wild soybeans. J Integr Agr, 2016, 15(2): 262-270
田宇, 杨蕾, 李英慧*, 邱丽娟. 抗大豆胞囊线虫SCN3-11位点的KASP标记开发和利用. 作物学报, 2018, 44 (11): 1600-1611
史学晖,李英慧*,于佰双,郭 勇,王家军,邱丽娟. 大豆胞囊线虫主效抗病基因Rhg4 (GmSHMT)的CAPS/dCAPS 标记开发和利用. 作物学报, 2015, 41(10): 1463-1471
张姗姗*,李英慧*,李金英,邱丽娟. 优良品系中品03-5373系谱的遗传解析及抗大豆胞囊线虫病相关标记鉴定. 作物学报, 2013, 39(10): 1746-1753
张 乐*, 李英慧*, 刘章雄, 邱丽娟. 栽培大豆(G. max)和野生大豆(G. soja)的Glyma13g21630基因多样性. 作物学报, 2011, 37(10): 1724-1734
李英慧, 常汝镇, 邱丽娟. 保存大豆种质遗传完整性的策略-基于 SSR 分子标记选择纯系. 中国农业科学, 2010, 43(19): 3930-3936
南海洋*, 李英慧*, 常汝镇, 邱丽娟. 基于大豆胞囊线虫病抗性候选基因rhg1的InDel 标记开发与鉴定. 作物学报, 2009, 35(7): 1236-1243
李英慧, 袁翠平, 张辰, 李伟, 南海洋, 常汝镇, 邱丽娟. 基于大豆胞囊线虫病抗性候选基因的SNP位点遗传变异分析. 遗传, 2009, 31(12): 1259-1264
魏伟*, 邱丽娟*, 张增艳*, 周海飞*, 李英慧*. 被忽视和未被充分利用植物物种:中国首批推荐名单. 植物遗传资源学报, 2008, 9(3): 406-410
李英慧, 刘燕, 关荣霞, 魏淑红, 杨光宇, 周新安, 张孟臣, 杨春燕, 朱保葛, 李卫东, 刘学义, 徐冉, 孙君明, 朱申龙, 赵团结, 刘章雄, 常汝镇, 邱丽娟. “十五”大豆创新种质和1963-1995年间育成品种的SSR遗传结构及遗传多样性分析. 作物学报, 2007, 33(10): 1630-1636