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1. Deng MH, Mehta S, Sun FZ, & Chen T (2002) Inferring domain-domain interactions from protein-protein interactions. Genome Res. 12(10):1540-1548
2. Deng,M.,Zhang,K.,Mehta,S., Chen, T.,Sun, F. Prediction of protein function using protein-protein interaction data. Journal of Computational Biology 2003 10(6):. 947-960.
3. Deng M., Tu Z., Chen T. and Sun F. Mapping Gene Ontology to proteins based on protein-protein interaction data. Bioinformatics 20:895-902, 2004.
4. Deng, M., Chen, T. and Sun F. An integrative analysis of protein function prediction. Journal of Computational Biology 11: 463-475, 2004.
5. Zheng, H., Hang, X., Zhu, J., Qian, M., Qu, W., Zhang, C. and Deng, M. REMAS: a new regression model to identify alternative splicing events from exon array data. BMC Bioinformatics Suppl 1, S28., 2009.