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Yingfan Cai#, Xiaoyan Cai#, Qinglian Wang#, Ping Wang#, Yu Zhang#, Chaowei Cai#, Yanchao Xu#, Kunbo Wang, Zhongli Zhou, Chenxiao Wang, Shuaipeng Geng, Bo Li, Qi Dong, Yuqing Hou, Heng Wang, Peng Ai, Zhen Liu, Feifei Yi, Minshan Sun, Guoyong An, Jieru Cheng, Yuanyuan Zhang, Qian Shi, Yuanhui Xie, Xinying Shi, Ying Chang, Feifei Huang, Yun Chen, Shimiao Hong, Lingyu Mi, Quan Sun, Lin Zhang, Baoliang Zhou, Renhai Peng, Xiao Zhang*and Fang Liu*. Genome sequencing of the Australian wild diploid species Gossypium australe highlights disease resistance and delayed gland morphogenesis. Plant Biotechnology Journal. 2019 Sep 3. doi: 10.1111/pbi.13249.
Zhang Ling, Li W, Tao Y, Zhao S, Yao L, Cai Yingfan*, Niu Q*.Overexpression of the key virulence factor 1,3-1,4-β-D-glucanase in the endophytic bacterium Bacillus halotolerans Y6 to improve Verticillium resistance in cotton. J Agric Food Chem. 2019 May 28. doi: 10.1021/acs.jafc.9b00728.
Dai P#, Miao Y#, He S, Pan Z, Jia Y, Cai Yingfan, Sun J, Wang L, Pang B, Wang M, Du Xiongming. Identifying favorable alleles for improving key agronomic traits in upland cotton. BMC Plant Biology, 2019 Apr 11;19(1):138. doi: 10.1186/s12870-019-1725-y.
Quan Sun, Guangfan Zhou, Yingfan Cai*, Yonghong Fan, Xiaoyan Zhu, Yihua Liu, Xiaohong He, Jinjuan Shen, Huaizhong Jiang, Daiwen Hu,Zheng Pan, Liuxin Xiang, Guanghua He,Jianping Yang. Transcriptome analysis of development of the stem in tumourous stem mustard, Brassica juncea var. tumida Tsen et Lee, by RNA sequencing. BMC Plant Biology, 2012, 12:53
Xiang Linxin, Liu J, Wu C, Deng Y, Cai C, Zhang X, Cai Yingfan*. Genome-wide comparative analysis of NBS-encoding genes in four Gossypium species. BMC Genomics. 2017 Apr 12;18(1):292. doi: 10.1186/s12864-017-3682-x.
Quan Sun, Huaizhong Jiang, Xiaoyan Zhu, Xiaohong He, Liuxin Xiang, Yuzhen Shi, YouluYuan, Xiongming Du,Yingfan Cai*. Analysis of Sea-Island Cotton and Upland Cotton in Response to Verticillium Dahliae Infection by RNA Sequencing. 2013, BMC Genomics, 2013 ,14:852
Xu Zheng, Suowei Wu, Huqu Zhai, Peng Zhou, Meifang Song, Liang Su, Yulin Xi, Zhiyong Li, Yingfan Cai, Fanhua Meng, Li Yang, Haiyang Wang, Jianping Yang*. (2013). Arabidopsis Phytochrome B Promotes SPA1 Nuclear Accumulation to Repress Photomorphogenesis under Far-Red Light. The Plant Cell, 2013，25(1):115-33
Sun Q, Du X, Cai C, Long L, Zhang S, Qiao P, Wang W, Zhou K, Wang G, Liu X, Zhang H, Geng S, Yang C, Gao W, Mo J, Miao C, Song C, Cai Yingfan*. To Be a Flower or Fruiting Branch: Insights Revealed by mRNA and Small RNA Transcriptomes from Different Cotton Developmental Stages. Scientific Reports. 2016 Mar 17;6:23212. doi: 10.1038/srep23212.
Yingfan Cai*, Yongfang Xie, Jinggao Liu. Glandless seed and glanded plant research in cotton. Agronomy for Sustainable Development，2010, 30（1）: 181-190
Sun Quan, Wang G, Zhang X, Zhang X, Qiao P, Long L, Yuan Y*, Cai Yingfan*. Genome-wide identification of the TIFY gene family in three cultivated Gossypium species and the expression of JAZ genes. Scientific Reports. 2017 Feb 10;7:42418. doi: 10.1038/srep42418.
Ping Wang, Sai Zhang, Jing Qiao, Quan Sun, Qian Shi, Chaowei Cai, Jianchuan Mo, Zongyan Chu, Youlu Yuan, Xiongming Du, Yuchen Miao, Xiao Zhang and Yingfan Cai*. Functional analysis of the GbDWARF14 gene associated with branching development in cotton. PeerJ, 2019，DOI 10.7717/peerj.6901
Xiang Liuxin, Cai C, Cheng J, Wang L, Wu C, Shi Y, Luo J, He L, Deng Y, Zhang X, Yuan Y, Cai Yingfan* Identification of circularRNAs and their targets in Gossypium under Verticillium wilt stress based on RNA-seq.. PeerJ. 2018 Mar 16;6:e4500. doi: 10.7717/peerj.4500. eCollection 2018.
Xiang Liuxin, Liu C, Luo J, He L, Deng Y, Yuan J, Wu C*, Cai Yingfan*. A tuber mustard AP2/ERF transcription factor gene, BjABR1, functioning in abscisic acid and abiotic stress responses, and evolutionary trajectory of the ABR1 homologous genes in Brassica species. PeerJ. 2018 Dec 11;6:e6071. doi: 10.7717/peerj.6071.
Sun Quan, Qiao J, Zhang S, He S, Shi Y, Yuan Y, Zhang X, Cai Yingfan*. Changes in DNA methylation assessed by genomic bisulfite sequencing suggest a role for DNA methylation in cotton fruiting branch development. PeerJ. 2018 Jun 14;6:e4945. doi: 10.7717/peerj.4945. eCollection 2018.
Wang W, Yuan Y, Yang C, Geng S, Sun Q, Long L, Cai C, Chu Z, Liu X, Wang G, Du X, Miao C, Zhang X, Cai Y*. Characterisation, Expression, and Functional Analysis of a Novel NAC Gene Associated with Resistance to Verticillium Wilt and Abiotic Stress in Cotton. G3: Genes, Genomes, Genetics， 2016 Nov 1. pii: g3.116.034512. doi: 10.1534/g3.116.034512.
Xiaohong He, Quan Sun, Huaizhong Jiang, Xiaoyan Zhu, Jianchuan Mo, Lu Long,Liuxin Xiang, Yongfang Xie, Yuzhen Shi, Youlu Yuan, Yingfan Cai*. Identification of novel microRNAs in the Verticillium wilt-resistant upland cotton variety KV-1 by high-throughput sequencing. Springerplus. 2014 Sep 27;3:564. doi: 10.1186/2193-1801-3-564. eCollection 2014(SCI).
Quan Sun, Yingfan Cai*, Yongfang Xie，Jianchuan Mo, Youlu Yuan, Yuzhen Shi , Shengwei Li, Huaizhong Jiang, Zheng Pan, Yunling Gao, Min Chen, Xiaohong He. Gene Expression Profiling During Gland Morphorgenesis in a Mutant and a Glandless Upland Cotton. Molecular biology reports,2010,37（7）:3319–3325
Liuxin Xiang, Yuxian Xia*, Yingfan Cai*, Jijun Liu, Xiaohong He, Quan Sun, Xiaoyan Wang, Yuyin Fu, Yonghong Fan, Daiwen Dong, Guanfan Zhou, Jinjuan Shen and Yihua Liu. Characterisation of the first tuber mustard calmodulin-like gene, BjAAR1, and its functions in responses to abiotic stress and abscisic acid in Arabidopsis. Journal of Plant Biology, 2013, 56:168-175.
Yong-Fang Xie, Biao Li, Bochu Wang*, Ying-Fan Cai*.Construction of cDNA Library of Cotton Mutant (Xiangmian 18) Library During Gland Forming Stage. Colloids and Surfaces B: Biointerfaces, 2007, 60（2）：258–263
Jinggao Liu, Robert Stipanovic,Yingfan Cai, Lorraine Puckhaber, Alois Bell. Cloning and Heterologous Expression of a Cytochrome P450 Hydroxylase Involved in the Terpenoid Biosynthetic Pathway in Cotton. Proceedings-Beltwide Cotton Conferences，USA. 2007, Jan.
Yingfan Cai，Hong Zhang，Yu Zeng，Jianchuan Mo，Jinku Bao，Chen Miaom Jie Baim Fang Yan and Fang Chen*. An optimized gossypol high-performance liquid chromatography assay and its application in evaluation of different gland genotypes of cotton. Journal of Biosciences，2004, 29（1）：67-71
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