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Xu,J.,Feng,L.,Han,Z.,Li,Y.,Wu,A.,Shao,T.,Ding,N.,Li,L.,Deng,W.,Di,X.,Wang,J.,Zhang,L.,Xia,L.,Zhang,K.,andCheng,Sh..ExtensiveceRNA–ceRNAinteractionnetworksmediatedbymiRNAsregulatedevelopmentinmultiplerhesustissues.NucleicAcidsResearch,2016,44(19):p.9438–9451.(SCI:10.162)
Ning,S.,M.Yue,P.Wang,Y.Liu,H.Zhi,Y.Zhang,J.Zhang,Y.Gao,M.Guo,D.Zhou,X.Li,andX.Li,LincSNP2.0:anupdateddatabaseforlinkingdisease-associatedSNPstohumanlongnon-codingRNAsandtheirTFBSs.NucleicAcidsRes,2017.45(D1):p.D74-D78.(SCI:10.162)
Zhang,H.,Y.Deng,Y.Zhang,Y.Ping,H.Zhao,L.Pang,X.Zhang,L.Wang,C.Xu,Y.Xiao,andX.Li,Cooperativegenomicalterationnetworkrevealsmolecularclassificationacross12majorcancertypes.NucleicAcidsRes,2017.45(2):p.567-582.(SCI:10.162)
Ping,Y.,Y.Deng,L.Wang,H.Zhang,Y.Zhang,C.Xu,H.Zhao,H.Fan,F.Yu,Y.Xiao,andX.Li,Identifyingcoregenemodulesinglioblastomabasedonmultilayerfactor-mediateddysfunctionalregulatorynetworksthroughintegratingmulti-dimensionalgenomicdata.NucleicAcidsRes,2015.43(4):p.1997-2007.(SCI:9.202)
Wang,P.,S.Ning,Y.Zhang,R.Li,J.Ye,Z.Zhao,H.Zhi,T.Wang,Z.Guo,andX.Li,IdentificationoflncRNA-associatedcompetingtripletsrevealsglobalpatternsandprognosticmarkersforcancer.NucleicAcidsRes,2015.43(7):p.3478-89(SCI:9.202)
Xu,J.,Y.Li,J.Lu,T.Pan,N.Ding,Z.Wang,T.Shao,J.Zhang,L.Wang,andX.Li,ThemRNArelatedceRNA-ceRNAlandscapeandsignificanceacross20majorcancertypes.NucleicAcidsRes,2015.(SCI:9.202)
Ning,S.,J.Zhang,P.Wang,H.Zhi,J.Wang,Y.Liu,Y.Gao,M.Guo,M.Yue,L.Wang,andX.Li,Lnc2Cancer:amanuallycurateddatabaseofexperimentallysupportedlncRNAsassociatedwithvarioushumancancers.NucleicAcidsRes,2015.(SCI:9.202)
Zhi,H.,S.Ning,X.Li,Y.Li,W.Wu,andX.Li,AnovelreannotationstrategyfordissectingDNAmethylationpatternsofhumanlongintergenicnon-codingRNAsincancers.NucleicAcidsRes,2014.42(13):p.8258-70.(SCI:9.112)
Wu,D.,Y.Huang,J.Kang,K.Li,X.Bi,T.Zhang,N.Jin,Y.Hu,P.Tan,L.Zhang,Y.Yi,W.Shen,J.Huang,X.Li,X.Li,J.Xu,D.Wang.ncRDeathDB:acomprehensivebioinformaticsresourcefordecipheringnetworkorganizationofthencRNA-mediatedcelldeathsystem.Autophagy.2015.(SCI:9.108)
Li,C.,J.Han,Q.Yao,C.Zou,Y.Xu,C.Zhang,D.Shang,L.Zhou,C.Zou,Z.Sun,J.Li,Y.Zhang,H.Yang,X.Gao,andX.Li,Subpathway-GM:identificationofmetabolicsubpathwaysviajointpowerofinterestinggenesandmetabolitesandtheirtopologieswithinpathways.NucleicAcidsRes,2013.41(9):p.e101.（SCIIF:8.808）
Li,Y.,J.Xu,H.Chen,J.Bai,S.Li,Z.Zhao,T.Shao,T.Jiang,H.Ren,C.Kang,andX.Li,ComprehensiveanalysisofthefunctionalmicroRNA-mRNAregulatorynetworkidentifiesmiRNAsignaturesassociatedwithgliomamalignantprogression.NucleicAcidsRes,2013.41(22):p.e203.（SCIIF:8.808）
Xiao,Y.,J.Guan,Y.Ping,C.Xu,T.Huang,H.Zhao,H.Fan,Y.Li,Y.Lv,T.Zhao,Y.Dong,H.Ren,andX.Li,Prioritizingcancer-relatedkeymiRNA-targetinteractionsbyintegrativegenomics.NucleicAcidsRes,2012.40(16):p.7653-65.（SCIIF:8.278）
Li,X.,Q.Wang,Y.Zheng,S.Lv,S.Ning,J.Sun,T.Huang,Q.Zheng,H.Ren,J.Xu,X.Wang,andY.Li,PrioritizinghumancancermicroRNAsbasedongenes'functionalconsistencybetweenmicroRNAandcancer.NucleicAcidsRes,2011.39(22):p.e153.（SCIIF:8.026）
Xu,J.,C.X.Li,Y.S.Li,J.Y.Lv,Y.Ma,T.T.Shao,L.D.Xu,Y.Y.Wang,L.Du,Y.P.Zhang,W.Jiang,C.Q.Li,Y.Xiao,andX.Li,MiRNA-miRNAsynergisticnetwork:constructionviaco-regulatingfunctionalmodulesanddiseasemiRNAtopologicalfeatures.NucleicAcidsRes,2011.39(3):p.825-36.（SCIIF:8.026）
Li,Y.,S.Li,J.Chen,T.Shao,C.Jiang,Y.Wang,H.Chen,J.Xu,andX.Li,Comparativeepigeneticanalysesrevealdistinctpatternsofoncogenicpathwaysactivationinbreastcancersubtypes.HumMolGenet,2014.23(20):p.5378-93.(SCI:6.393)
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