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G-quadruplex Structures Contribute to Differential Radiosensitivity of the Human Genome.
iScience ( IF 4.6 ) Pub Date : 2019-10-21 , DOI: 10.1016/j.isci.2019.10.033
Nitu Kumari 1 , Supriya V Vartak 1 , Sumedha Dahal 1 , Susmita Kumari 1 , Sagar S Desai 2 , Vidya Gopalakrishnan 3 , Bibha Choudhary 4 , Sathees C Raghavan 1
Affiliation  

DNA, the fundamental unit of human cell, generally exists in Watson-Crick base-paired B-DNA form. Often, DNA folds into non-B forms, such as four-stranded G-quadruplexes. It is generally believed that ionizing radiation (IR) induces DNA strand-breaks in a random manner. Here, we show that regions of DNA enriched in G-quadruplex structures are less sensitive to IR compared with B-DNA in vitro and inside cells. Planar G-quartet of G4-DNA is shielded from IR-induced free radicals, unlike single- and double-stranded DNA. Whole-genome sequence analysis and real-time PCR reveal that genomic regions abundant in G4-DNA are protected from radiation-induced breaks and can be modulated by G4 stabilizers. Thus, our results reveal that formation of G4 structures contribute toward differential radiosensitivity of the human genome.



中文翻译:

G四联体结构有助于人类基因组的差异放射敏感性。

DNA是人类细胞的基本单位,通常以Watson-Crick碱基配对的B-DNA形式存在。通常,DNA会折叠成非B形式,例如四链G-四链体。通常认为,电离辐射(IR)以随机方式诱导DNA链断裂。在这里,我们表明,与体外B-DNA相比,富含G-四链体结构的DNA区域对IR的敏感性较低和细胞内部。与单链和双链DNA不同,G4-DNA的平面G四联体可抵御IR诱导的自由基。全基因组序列分析和实时PCR表明,富含G4-DNA的基因组区域受到辐射诱导的断裂的保护,并且可以由G4稳定剂调节。因此,我们的结果表明G4结构的形成有助于人类基因组的放射敏感性差异。

更新日期:2019-10-21
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