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BAFfling pathologies: Alterations of BAF complexes in cancer
Cancer Letters ( IF 9.1 ) Pub Date : 2018-01-31 , DOI: 10.1016/j.canlet.2018.01.046
Ophelie Arnaud , François Le Loarer , Franck Tirode

To activate or repress specific genes, chromatin is constantly modified by chromatin-remodeling complexes. Among these complexes, the SWItch/Sucrose Non-Fermenting (SWI/SNF) complex, also referred to as BRG1-Associated Factor (BAF) complex, moves the nucleosome along chromatin using energy provided by ATP hydrolysis. In mammalian organisms, the SWI/SNF complex is composed of 10–15 subunits, depending on cell type, and a defect in one of these subunits can have dramatic consequences. In this review we will focus on the alterations identified in the SWI/SNF (BAF) complex subunits that lead to cancerous pathologies. While SMARCB1 was the first mutated subunit to be reported in a majority of malignant rhabdoid tumors, the advent of next-generation sequencing allowed the discovery of mutations in various SWI/SNF subunits within a broad spectrum of cancers. In most cases, the mutation leads to a loss of expression or to a truncated subunit unable to perform its function. Even though it is now commonly acknowledged that approximately 20% of all cancers present a mutation in a SWI/SNF subunit, some cancers are associated to a specific alteration of a SWI/SNF subunit, which acts either as tumor suppressor genes or as oncogenes, and therefore constitute diagnostic or prognostic biomarkers. Consistently, therapeutic strategies targeting SWI/SNF subunits or the genes affected downstream have been revealed to treat cancers.



中文翻译:

BAFfling病理:癌症中BAF复合物的改变

为了激活或抑制特定基因,染色质可以通过染色质重塑复合物进行不断修饰。在这些复合物中,SWItch /蔗糖非发酵(SWI / SNF)复合物,也称为BRG1相关因子(BAF)复合物,利用ATP水解提供的能量使核小体沿染色质移动。在哺乳动物生物体中,SWI / SNF复合体由10–15个亚基组成,具体取决于细胞类型,这些亚基之一的缺陷可能会产生严重后果。在这篇综述中,我们将重点研究SWI / SNF(BAF)复杂亚基中鉴定出的导致癌症病理的改变。尽管SMARCB1是大多数恶性横纹肌瘤中第一个被报道的突变亚基,下一代测序技术的出现允许在广泛的癌症中发现各种SWI / SNF亚基的突变。在大多数情况下,突变会导致表达丧失或导致无法执行其功能的截短的亚基。尽管现在通常公认的是,所有癌症中约有20%在SWI / SNF亚基中出现突变,但是某些癌症与SWI / SNF亚基的特定改变有关,后者既可以作为抑癌基因,也可以作为癌基因,因此构成了诊断或预后生物标志物。一致地,已经发现靶向SWI / SNF亚基或下游受影响基因的治疗策略可以治疗癌症。尽管现在通常公认的是,所有癌症中约有20%在SWI / SNF亚基中出现突变,但有些癌症与SWI / SNF亚基的特定改变有关,后者既可以作为抑癌基因,也可以作为癌基因,因此构成了诊断或预后生物标志物。一致地,已经发现靶向SWI / SNF亚基或下游受影响基因的治疗策略可治疗癌症。尽管现在通常公认的是,所有癌症中约有20%在SWI / SNF亚基中出现突变,但有些癌症与SWI / SNF亚基的特定改变有关,后者既可以作为抑癌基因,也可以作为癌基因,因此构成了诊断或预后生物标志物。一致地,已经发现靶向SWI / SNF亚基或下游受影响基因的治疗策略可以治疗癌症。

更新日期:2018-01-31
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