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Pseudopolymorphs of chelidamic acid and its dimethyl ester
Acta Crystallographica Section C ( IF 0.7 ) Pub Date : 2012-09-02 , DOI: 10.1107/s0108270112031691
Maya Tutughamiarso , Thorsten Pisternick , Ernst Egert

Different tautomeric and zwitterionic forms of chelidamic acid (4‐hydroxypyridine‐2,6‐dicarboxylic acid) are present in the crystal structures of chelidamic acid methanol monosolvate, C7H5NO5·CH4O, (Ia), dimethylammonium chelidamate (dimethylammonium 6‐carboxy‐4‐hydroxypyridine‐2‐carboxylate), C2H8N+·C7H4NO5, (Ib), and chelidamic acid dimethyl sulfoxide monosolvate, C7H5NO5·C2H6OS, (Ic). While the zwitterionic pyridinium carboxylate in (Ia) can be explained from the pKa values, a (partially) deprotonated hydroxy group in the presence of a neutral carboxy group, as observed in (Ib) and (Ic), is unexpected. In (Ib), there are two formula units in the asymmetric unit with the chelidamic acid entities connected by a symmetric O—H...O hydrogen bond. Also, crystals of chelidamic acid dimethyl ester (dimethyl 4‐hydroxypyridine‐2,6‐dicarboxylate) were obtained as a monohydrate, C9H9NO5·H2O, (IIa), and as a solvent‐free modification, in which both ester molecules adopt the hydroxypyridine form. In (IIa), the solvent water molecule stabilizes the synperiplanar conformation of both carbonyl O atoms with respect to the pyridine N atom by two O—H...O hydrogen bonds, whereas an antiperiplanar arrangement is observed in the water‐free structure. A database study and ab initio energy calculations help to compare the stabilities of the various ester conformations.

中文翻译:

螯胺酸及其二甲酯的假多晶型物

螯胺酸(C 7 H 5 NO 5 ·CH 4 O,(I a),螯合物二甲基铵)的晶体结构中存在不同的互变异构形式和两性离子形式的螯合物(4-羟基吡啶-2,6-二羧酸)(6-羧基-4-羟基吡啶-2-羧酸二甲基铵),C 2 H 8 N + ·C 7 H 4 NO 5 -,(I b)和氯胺酸二甲亚砜单溶剂化物,C 7 H 5 NO 5 ·C 2 H 6 OS,(Ic)。尽管可以从p K a值解释(I a)中的两性离子吡啶鎓羧酸盐,但是在(I b)和(I c)中观察到,在存在中性羧基的情况下,a(部分)去质子化的羟基是意外。在(I b)中,在不对称单元中有两个分子式单元,其具有通过对称的OH ... O氢键连接的螯胺酸实体。同样,获得了作为一水合物C 9 H 9 NO 5 ·H 2 O的螯胺酸二甲酯(4-羟基吡啶-2-2,6-二羧酸二甲酯)晶体(II a),并且作为无溶剂的修饰,两个酯分子均采用羟基吡啶形式。在(II a)中,溶剂水分子通过两个OH-H ... O氢键稳定了两个羰基O原子相对于吡啶N原子的同上平面构象,而在无水结构中观察到了反同上平面排列。数据库研究和从头算能量的计算有助于比较各种酯构象的稳定性。
更新日期:2012-09-02
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