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Urinary proteomics identifies distinct immunological profiles of sepsis associated AKI sub-phenotypes
Critical Care ( IF 8.8 ) Pub Date : 2024-12-18 , DOI: 10.1186/s13054-024-05202-9
Ian B. Stanaway, Eric D. Morrell, F. Linzee Mabrey, Neha A. Sathe, Zoie Bailey, Sarah Speckmaier, Jordan Lo, Leila R. Zelnick, Jonathan Himmelfarb, Carmen Mikacenic, Laura Evans, Mark M. Wurfel, Pavan K. Bhatraju

Patients with sepsis-induced AKI can be classified into two distinct sub-phenotypes (AKI-SP1, AKI-SP2) that differ in clinical outcomes and response to treatment. The biologic mechanisms underlying these sub-phenotypes remains unknown. Our objective was to understand the underlying biology that differentiates AKI sub-phenotypes and associations with kidney outcomes. We prospectively enrolled 173 ICU patients with sepsis from a suspected respiratory infection (87 without AKI and 86 with AKI on enrollment). Among the AKI patients, 66 were classified as AKI-SP1 and 20 as AKI-SP2 using a three-plasma biomarker classifier. Aptamer-based proteomics assessed 5,212 proteins in urine collected on ICU admission. We compared urinary protein abundances between AKI sub-phenotypes, conducted pathway analyses, tested associations with risk of RRT and blood bacteremia, and predicted AKI-SP2 class membership using LASSO. In total, 117 urine proteins were higher in AKI-SP2, 195 were higher in AKI-SP1 (FDR < 0.05). Urinary proteins involved in inflammation and chemoattractant of neutrophils and monocytes (CXCL1 and REG3A) and oxidative stress (SOD2) were abundant in AKI-SP2, while proteins involved in collagen deposition (GP6), podocyte derived (SPOCK2), proliferation of mesenchymal cells (IL11RA), anti-inflammatory (IL10RB and TREM2) were abundant in AKI-SP1. Pathways related to immune response, complement activation and chemokine signaling were upregulated in AKI-SP2 and pathways of cell adhesion were upregulated in AKI-SP1. Overlap was present between urinary proteins that differentiated AKI sub-phenotypes and proteins that differentiated risk of RRT during hospitalization. Variable correlation was found between top aptamers and ELISA based protein assays. A LASSO derived urinary proteomic model to classify AKI-SP2 had a mean AUC of 0.86 (95% CI: 0.69–0.99). Our findings suggest AKI-SP1 is characterized by a reparative, regenerative phenotype and AKI-SP2 is characterized as an immune and inflammatory phenotype associated with blood bacteremia. We identified shared biology between AKI sub-phenotypes and eventual risk of RRT highlighting potential therapeutic targets. Urine proteomics may be used to non-invasively classify SP2 participants.

中文翻译:


尿液蛋白质组学鉴定脓毒症相关 AKI 亚表型的不同免疫学特征



脓毒症诱导的 AKI 患者可分为两种不同的亚型(AKI-SP1、AKI-SP2),它们在临床结果和对治疗的反应上有所不同。这些亚表型的生物学机制仍然未知。我们的目标是了解区分 AKI 亚表型和与肾脏结果关联的潜在生物学。我们前瞻性地招募了 173 例疑似呼吸道感染引起的脓毒症 ICU 患者 (87 例无 AKI,86 例入组时有 AKI)。在 AKI 患者中,使用三血浆生物标志物分类器将 66 例分类为 AKI-SP1,20 例分类为 AKI-SP2。基于适配子的蛋白质组学评估了入住 ICU 时收集的尿液中的 5,212 种蛋白质。我们比较了 AKI 亚型之间的尿蛋白丰度,进行了通路分析,测试了与 RRT 和血液菌血症风险的关联,并使用 LASSO 预测了 AKI-SP2 类成员。总共有 117 种尿蛋白在 AKI-SP2 中较高,195 种在 AKI-SP1 中较高 (FDR < 0.05)。AKI-SP2 中涉及中性粒细胞和单核细胞 (CXCL1 和 REG3A) 的炎症和趋化因子 (CXCL1 和 REG3A) 以及氧化应激 (SOD2) 的尿蛋白丰富,而参与胶原沉积 (GP6) 、足细胞衍生 (SPOCK2)、间充质细胞增殖 (IL11RA) 、抗炎 (IL10RB 和 TREM2) 的蛋白质在 AKI-SP1 中丰富。AKI-SP2 中免疫应答、补体激活和趋化因子信号转导相关的通路上调,AKI-SP1 中细胞粘附通路上调。区分 AKI 亚表型的尿蛋白与区分住院期间 RRT 风险的蛋白之间存在重叠。在顶级适配体和基于 ELISA 的蛋白质测定之间发现了可变的相关性。 用于对 AKI-SP2 进行分类的 LASSO 衍生的尿液蛋白质组学模型的平均 AUC 为 0.86 (95% CI: 0.69–0.99)。我们的研究结果表明,AKI-SP1 的特征是修复性、再生性表型,而 AKI-SP2 的特征是与血液菌血症相关的免疫和炎症表型。我们确定了 AKI 亚表型和 RRT 的最终风险之间的共同生物学,突出了潜在的治疗靶点。尿液蛋白质组学可用于对 SP2 参与者进行无创分类。
更新日期:2024-12-18
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