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Chromatin Helicase CHD6 Establishes Pro-inflammatory Enhancers and is a Synthetic Lethal Target in FH-Deficient Renal Cell Carcinoma
Cancer Research ( IF 12.5 ) Pub Date : 2024-11-26 , DOI: 10.1158/0008-5472.can-24-0787
Juan Jin, Jun Luo, Xiaodong Jin, Kiat Shenq Lim, Yang He, Jiawei Ding, Yan Shen, Yuchen Hou, Hanqing Liu, Xiaoyu Zhu, Jing Zhao, Wenjie Zhou, Hai Huang, Yi Gao, Jun Xiao, Hongchao He, Qunyi Li, Lianxin Liu, Li Chen, Qiang He, Chuanjie Zhang

Fumarate hydratase (FH) deficiency causes hereditary leiomyomatosis and renal cell carcinoma (RCC). FH-deficient tumors lack effective therapeutic options. Here, we utilized an epigenetic-focused single-guide RNA library to elucidate potential drug targets in FH-deficient tumors. The screen identified chromodomain helicase DNA binding protein 6 (CHD6) as an essential regulator of the growth of FH-mutated RCC. Mechanically, FH loss induced fumarate-mediated succinylation and inactivation of KEAP1, blocking subsequent ubiquitin-proteasome degradation of CHD6. Stabilized CHD6 formed a complex with p65 to establish pro-inflammatory enhancers and thereby regulate NF-κB-mediated transcription. Moreover, CHD6 recruited mSWI/SNF ATPases to maintain chromatin accessibility at CHD6-bound enhancers. The PROTAC degrader of SMARCA2/4 AU-15330 effectively abolished structures of cis-regulatory elements bound by CHD6 and suppressed the growth of FH-mutated, but not FH-intact, RCC in vivo. Collectively, these data indicate that CHD6 is a molecular bridge between FH deficiency and pro-inflammatory enhancers assembly that endows FH-deficient tumors with epigenetic vulnerabilities.

中文翻译:


染色质解旋酶 CHD6 建立促炎增强子,是 FH 缺陷型肾细胞癌中的合成致死靶标



富马酸盐水合酶 (FH) 缺乏症会导致遗传性平滑肌瘤病和肾细胞癌 (RCC)。FH 缺陷型肿瘤缺乏有效的治疗选择。在这里,我们利用以表观遗传学为重点的单向导 RNA 文库来阐明 FH 缺陷型肿瘤中的潜在药物靶点。筛选确定染色质域解旋酶 DNA 结合蛋白 6 (CHD6) 是 FH 突变 RCC 生长的重要调节因子。在机械上,FH 缺失诱导富马酸介导的琥珀酰化和 KEAP1 失活,阻断随后的泛素蛋白酶体降解 CHD6。稳定的 CHD6 与 p65 形成复合物,建立促炎增强子,从而调节 NF-κB 介导的转录。此外,CHD6 募集 mSWI/SNF ATP 酶以维持 CHD6 结合增强子的染色质可及性。SMARCA2/4 AU-15330 的 PROTAC 降解剂有效消除了与 CHD6 结合的顺式调节元件的结构,并抑制了 FH 突变但非 FH 完整的 RCC 在体内的生长。总的来说,这些数据表明 CHD6 是 FH 缺陷和促炎增强子组装之间的分子桥梁,赋予 FH 缺陷肿瘤表观遗传脆弱性。
更新日期:2024-11-26
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