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Identification of genetic subtypes in follicular lymphoma
Blood Cancer Journal ( IF 12.9 ) Pub Date : 2024-08-07 , DOI: 10.1038/s41408-024-01111-w
Victoria Shelton 1 , Rajesh Detroja 1 , Ting Liu 1 , Keren Isaev 1 , Anjali Silva 1, 2 , Verena Passerini 3 , Mehran Bakhtiari 1 , Lourdes Calvente 1 , Michael Hong 1 , Michael Y He 1 , Saloni Modi 1 , Samantha A Hershenfeld 1 , Maja Ludvigsen 4, 5 , Charlotte Madsen 5 , Stephen Hamilton-Dutoit 6 , Francesco Annibale d'Amore 4, 5 , Marianne Brodtkorb 7 , Nathalie A Johnson 8 , Tara Baetz 9 , David LeBrun 10 , Josh W D Tobin 11, 12 , Maher K Gandhi 11, 12 , Andrew J Mungall 13 , Wei Xu 14 , Susana Ben-Neriah 15 , Christian Steidl 15 , Jan Delabie 16 , Rosemarie Tremblay-LeMay 16 , Opeyemi Jegede 17 , Oliver Weigert 3, 18, 19 , Brad Kahl 20 , Andrew M Evens 21 , Robert Kridel 1
Affiliation  

Follicular lymphoma (FL) exhibits considerable variability in biological features and clinical trajectories across patients. To dissect the diversity of FL, we utilized a Bernoulli mixture model to identify genetic subtypes in 713 pre-treatment tumor tissue samples. Our analysis revealed the existence of five subtypes with unique genetic profiles that correlated with clinicopathological characteristics. The clusters were enriched in specific mutations as follows: CS (CREBBP and STAT6), TT (TNFAIP3 and TP53), GM (GNA13 and MEF2B), Q (quiescent, for low mutation burden), and AR (mutations of mTOR pathway-related genes). The subtype Q was enriched for patients with stage I disease and associated with a lower proliferative history than the other subtypes. The AR subtype was unique in its enrichment for IgM-expressing FL cases and was associated with advanced-stage and more than 4 nodal sites. The existence of subtypes was validated in an independent cohort of 418 samples from the GALLIUM trial. Notably, patients assigned to the TT subtype consistently experienced inferior progression-free survival when treated with immunochemotherapy. Our findings offer insight into core pathways distinctly linked with each FL cluster and are expected to be informative in the era of targeted therapies.



中文翻译:


滤泡性淋巴瘤遗传亚型的鉴定



滤泡性淋巴瘤 (FL) 在患者的生物学特征和临床轨迹方面表现出相当大的差异。为了剖析 FL 的多样性,我们利用伯努利混合模型来鉴定 713 例治疗前肿瘤组织样本中的遗传亚型。我们的分析揭示了存在五种亚型,这些亚型具有与临床病理特征相关的独特遗传特征。这些簇富含以下特异性突变:CS (CREBBPSTAT6)、TT (TNFAIP3TP53)、GM (GNA13MEF2B)、Q (静止,低突变负荷)和 AR (mTOR 通路相关基因突变)。I 期疾病患者富含 Q 亚型,并且与其他亚型相比,其增殖史较低。AR 亚型在表达 IgM 的 FL 病例中富集方面是独一无二的,并且与晚期和超过 4 个淋巴结部位相关。亚型的存在在 GALLIUM 试验的 418 个样本的独立队列中得到验证。值得注意的是,分配到 TT 亚型的患者在接受免疫化疗治疗时始终经历较差的无进展生存期。我们的研究结果提供了对与每个 FL 集群明显相关的核心途径的见解,并有望在靶向治疗时代提供信息。

更新日期:2024-08-08
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