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miRNome profiling of extracellular vesicles in severe COVID-19 patients and identification of predictors of mortality
The Journal of Infectious Diseases ( IF 5.0 ) Pub Date : 2024-06-12 , DOI: 10.1093/infdis/jiae310 Laura Sánchez-De Prada 1, 2, 3 , Adrián García-Concejo 1, 4 , Álvaro Tamayo-Velasco 1, 4, 5 , Marta Martín-Fernández 1, 4, 6 , Hugo Gonzalo-Benito 1, 4, 7 , Óscar Gorgojo-Galindo 1, 7 , A Montero-Jodra 1, 7 , María Teresa Peláez 1, 8 , Iciar Martínez Almeida 1, 8 , Miguel Bardají-Carrillo 1, 8 , Rocío López-Herrero 1, 8, 9 , Patricia Román-García 1, 8 , José María Eiros 2, 3 , Iván Sanz-Muñoz 1, 2, 4 , Teresa Aydillo 10, 11 , María Ángeles Jiménez-Sousa 1, 4, 12 , Amanda Fernández-Rodríguez 1, 4, 12 , Salvador Resino 1, 4, 12 , María Heredia-Rodríguez 1, 4, 13 , David Bernardo 4, 14 , Ester Gómez-Sánchez 1, 4, 8, 9 , Eduardo Tamayo 1, 4, 8, 9
The Journal of Infectious Diseases ( IF 5.0 ) Pub Date : 2024-06-12 , DOI: 10.1093/infdis/jiae310 Laura Sánchez-De Prada 1, 2, 3 , Adrián García-Concejo 1, 4 , Álvaro Tamayo-Velasco 1, 4, 5 , Marta Martín-Fernández 1, 4, 6 , Hugo Gonzalo-Benito 1, 4, 7 , Óscar Gorgojo-Galindo 1, 7 , A Montero-Jodra 1, 7 , María Teresa Peláez 1, 8 , Iciar Martínez Almeida 1, 8 , Miguel Bardají-Carrillo 1, 8 , Rocío López-Herrero 1, 8, 9 , Patricia Román-García 1, 8 , José María Eiros 2, 3 , Iván Sanz-Muñoz 1, 2, 4 , Teresa Aydillo 10, 11 , María Ángeles Jiménez-Sousa 1, 4, 12 , Amanda Fernández-Rodríguez 1, 4, 12 , Salvador Resino 1, 4, 12 , María Heredia-Rodríguez 1, 4, 13 , David Bernardo 4, 14 , Ester Gómez-Sánchez 1, 4, 8, 9 , Eduardo Tamayo 1, 4, 8, 9
Affiliation
Background Extracellular vesicles (EVs), containing microRNAs (miRNAs) and other molecules, play a central role in intercellular communication, especially in viral infections caused by SARS-CoV-2. This study explores the miRNA profiles in plasma-derived EVs from severe COVID-19 patients referred to controls, identifying potential mortality miRNA predictors. Methods A prospective study was carried out, including 36 severe COVID-19 patients and 33 non-COVID-19 controls. EVs-derived miRNAs were sequenced, and bioinformatics and differential expression analysis between groups were performed. The plasma miRNA profile of an additional cohort of severe COVID-19 patients (n=32) and non-COVID-19 controls (n=12) was used to compare with our data. Survival analysis was used to identify potential mortality predictors among the SDE miRNAs in EVs. Results Severe COVID-19 patients showed 50 significantly differentially expressed (SDE) miRNAs in plasma-derived EVs. These miRNAs were associated with pathways related to inflammation and cell adhesion. Fifteen of these plasma-derived EVs miRNAs were also SDE in the plasma of severe patients vs controls. Two miRNAs, hsa-miR-1469 and hsa-miR-6124, were identified as strong mortality predictors with an área under the ROC Curve (AUC) of 0.938. Conclusion : This research provides insights into the role of miRNAs found within EVs in severe COVID-19 and their potential as clinical biomarkers for mortality.
中文翻译:
重症 COVID-19 患者细胞外囊泡的 miRNome 分析和死亡预测因子的鉴定
背景 含有 microRNA (miRNA) 和其他分子的细胞外囊泡 (EV) 在细胞间通讯中起着核心作用,尤其是在 SARS-CoV-2 引起的病毒感染中。本研究探讨了转诊至对照组的严重 COVID-19 患者的血浆衍生 EV 中的 miRNA 谱,确定了潜在的死亡率 miRNA 预测因子。方法 进行了一项前瞻性研究,包括 36 名重症 COVID-19 患者和 33 名非 COVID-19 对照者。对 EVs 来源的 miRNAs 进行测序,进行生物信息学和组间差异表达分析。使用另一组重症 COVID-19 患者 (n=32) 和非 COVID-19 对照 (n=12) 的血浆 miRNA 谱与我们的数据进行比较。生存分析用于确定 EV 中 SDE miRNAs 中的潜在死亡率预测因子。结果 重症 COVID-19 患者在血浆来源的 EVs 中显示出 50 个显著差异表达 (SDE) miRNA。这些 miRNAs 与炎症和细胞粘附相关的通路相关。与对照组相比,这些血浆来源的 EVs miRNA 中有 15 个在重症患者血浆中也是 SDE。两种 miRNA,hsa-miR-1469 和 hsa-miR-6124,被确定为强死亡率预测因子,ROC 曲线下 área (AUC) 为 0.938。结论: 本研究深入了解了 EV 中发现的 miRNA 在严重 COVID-19 中的作用及其作为死亡率临床生物标志物的潜力。
更新日期:2024-06-12
中文翻译:
重症 COVID-19 患者细胞外囊泡的 miRNome 分析和死亡预测因子的鉴定
背景 含有 microRNA (miRNA) 和其他分子的细胞外囊泡 (EV) 在细胞间通讯中起着核心作用,尤其是在 SARS-CoV-2 引起的病毒感染中。本研究探讨了转诊至对照组的严重 COVID-19 患者的血浆衍生 EV 中的 miRNA 谱,确定了潜在的死亡率 miRNA 预测因子。方法 进行了一项前瞻性研究,包括 36 名重症 COVID-19 患者和 33 名非 COVID-19 对照者。对 EVs 来源的 miRNAs 进行测序,进行生物信息学和组间差异表达分析。使用另一组重症 COVID-19 患者 (n=32) 和非 COVID-19 对照 (n=12) 的血浆 miRNA 谱与我们的数据进行比较。生存分析用于确定 EV 中 SDE miRNAs 中的潜在死亡率预测因子。结果 重症 COVID-19 患者在血浆来源的 EVs 中显示出 50 个显著差异表达 (SDE) miRNA。这些 miRNAs 与炎症和细胞粘附相关的通路相关。与对照组相比,这些血浆来源的 EVs miRNA 中有 15 个在重症患者血浆中也是 SDE。两种 miRNA,hsa-miR-1469 和 hsa-miR-6124,被确定为强死亡率预测因子,ROC 曲线下 área (AUC) 为 0.938。结论: 本研究深入了解了 EV 中发现的 miRNA 在严重 COVID-19 中的作用及其作为死亡率临床生物标志物的潜力。