Eliminating malaria by 2030 is stated as goal three in the UN’s Sustainable Development Goals (SDGs). However, malaria still remains a significant public health problem. This study aims to identify the factors determining malaria transmission in artisanal or small-scale miner (ASM) communities in three villages: Tanjung Agung, Tanjung Lalang, and Penyandingan, located in the Tanjung Enim District, Muara Enim, South Sumatra, Indonesia. Researchers conducted a cross-sectional study involving 92 participants from the study area. They used a logistic regression model to investigate the risk factors related to malaria occurrence. The multivariable analysis revealed that age (Adjusted Prevalence Ratio (APR) = 7.989 with 95% CI 1.724–37.002) and mosquito breeding (APR = 7.685 with 95% CI 1.502–39.309) were risk factors for malaria. On the other hand, higher education (APR = 0.104 with 95% CI 0.027–0.403), the use of mosquito repellent (APR = 0.138 with 95% CI 0.035–0.549), and the condition of house walls (APR = 0.145 with 95% CI 0.0414–0.511) were identified as protective factors. The current study highlights age and mosquito breeding sites as risk factors for malaria. Additionally, higher education, insect repellent use, and the condition of house walls are protective factors against malaria. Therefore, reducing risk factors and increasing protective measures through effective communication, information, and education are highly recommended to eliminate malaria in mining areas.